RNA–Protein interactions for RNA: ENST00000400771.7

ATG4B-202, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 663 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-202ENST00000400771 TTC38Q5R3I4 469 aa17.3■□□□□ 0.36
ATG4B-202ENST00000400771 C4orf32Q8N8J7 132 aa17.3■□□□□ 0.36
ATG4B-202ENST00000400771 XPNPEP1Q9NQW7 623 aa17.3■□□□□ 0.36
ATG4B-202ENST00000400771 RGS18Q9NS28 235 aa17.3■□□□□ 0.36
ATG4B-202ENST00000400771 PCDHA12Q9UN75 941 aa17.3■□□□□ 0.36
ATG4B-202ENST00000400771 TCF20Q9UGU0 1960 aaKnown RBP17.29■□□□□ 0.36
ATG4B-202ENST00000400771 MUC3AQ02505 3323 aa17.29■□□□□ 0.36
ATG4B-202ENST00000400771 OR52Z1P0C646 297 aa17.29■□□□□ 0.36
ATG4B-202ENST00000400771 ATP2B1P20020 1258 aa17.29■□□□□ 0.36
ATG4B-202ENST00000400771 EIF4BP23588 611 aaKnown RBP17.29■□□□□ 0.36
ATG4B-202ENST00000400771 GJB2P29033 226 aa17.29■□□□□ 0.36
ATG4B-202ENST00000400771 TRAPPC10P48553 1259 aa17.29■□□□□ 0.36
ATG4B-202ENST00000400771 EPC2Q52LR7 807 aa17.29■□□□□ 0.36
ATG4B-202ENST00000400771 NEK9Q8TD19 979 aa17.29■□□□□ 0.36
ATG4B-202ENST00000400771 CLP1Q92989 425 aaKnown RBP17.29■□□□□ 0.36
ATG4B-202ENST00000400771 ADAM2Q99965 735 aa17.29■□□□□ 0.36
ATG4B-202ENST00000400771 ZSWIM4Q9H7M6 989 aa17.29■□□□□ 0.36
ATG4B-202ENST00000400771 PPME1Q9Y570 386 aa17.29■□□□□ 0.36
ATG4B-202ENST00000400771 BDP1A6H8Y1 2624 aa17.28■□□□□ 0.36
ATG4B-202ENST00000400771 TDRD15B5MCY1 1934 aaKnown RBP17.28■□□□□ 0.36
ATG4B-202ENST00000400771 GPR182O15218 404 aa17.28■□□□□ 0.36
ATG4B-202ENST00000400771 MARCH6O60337 910 aa17.28■□□□□ 0.36
ATG4B-202ENST00000400771 DKC1O60832 514 aaKnown RBP eCLIP17.28■□□□□ 0.36
ATG4B-202ENST00000400771 SPATA31C1P0DKV0 1188 aa17.28■□□□□ 0.36
ATG4B-202ENST00000400771 FGFR4P22455 802 aa17.28■□□□□ 0.36
ATG4B-202ENST00000400771 MCM2P49736 904 aa17.28■□□□□ 0.36
ATG4B-202ENST00000400771 EMC2Q15006 297 aa17.28■□□□□ 0.36
ATG4B-202ENST00000400771 ZNF174Q15697 407 aa17.28■□□□□ 0.36
ATG4B-202ENST00000400771 KSR1Q8IVT5 923 aa17.28■□□□□ 0.36
ATG4B-202ENST00000400771 ZNF710Q8N1W2 664 aa17.28■□□□□ 0.36
ATG4B-202ENST00000400771 FBXO22Q8NEZ5 403 aa17.28■□□□□ 0.36
ATG4B-202ENST00000400771 CEP170P1Q96L14 293 aa17.28■□□□□ 0.36
ATG4B-202ENST00000400771 BMP2KQ9NSY1 1161 aaPredicted RBP17.28■□□□□ 0.36
ATG4B-202ENST00000400771 RNF19AQ9NV58 838 aa17.28■□□□□ 0.36
ATG4B-202ENST00000400771 A0A087WZ62 844 aa17.27■□□□□ 0.36
ATG4B-202ENST00000400771 C5orf67F2Z3F1 127 aa17.27■□□□□ 0.36
ATG4B-202ENST00000400771 MED24O75448 989 aa17.27■□□□□ 0.36
ATG4B-202ENST00000400771 CSDE1O75534 798 aaKnown RBP17.27■□□□□ 0.36
ATG4B-202ENST00000400771 RFC5P40937 340 aa17.27■□□□□ 0.36
ATG4B-202ENST00000400771 CUL4AQ13619 759 aa17.27■□□□□ 0.36
ATG4B-202ENST00000400771 CCDC85BQ15834 202 aaPredicted RBP17.27■□□□□ 0.36
ATG4B-202ENST00000400771 FAM43BQ6ZT52 329 aaPredicted RBP17.27■□□□□ 0.36
ATG4B-202ENST00000400771 ZNF410Q86VK4 478 aa17.27■□□□□ 0.36
ATG4B-202ENST00000400771 TMEM192Q8IY95 271 aa17.27■□□□□ 0.36
ATG4B-202ENST00000400771 CMTR2Q8IYT2 770 aaKnown RBP17.27■□□□□ 0.36
ATG4B-202ENST00000400771 MICALL1Q8N3F8 863 aa17.27■□□□□ 0.36
ATG4B-202ENST00000400771 NLRP7Q8WX94 980 aa17.27■□□□□ 0.36
ATG4B-202ENST00000400771 PPM1EQ8WY54 764 aa17.27■□□□□ 0.36
ATG4B-202ENST00000400771 SAMD11Q96NU1 681 aa17.27■□□□□ 0.36
ATG4B-202ENST00000400771 FDXACB1Q9BRP7 624 aaPredicted RBP17.27■□□□□ 0.36
ATG4B-202ENST00000400771 IFT122Q9HBG6 1241 aa17.27■□□□□ 0.36
ATG4B-202ENST00000400771 C1orf112Q9NSG2 853 aa17.27■□□□□ 0.36
ATG4B-202ENST00000400771 SUCLA2Q9P2R7 463 aaPredicted RBP17.27■□□□□ 0.36
ATG4B-202ENST00000400771 PCDHB6Q9Y5E3 794 aa17.27■□□□□ 0.36
ATG4B-202ENST00000400771 MRPL42Q9Y6G3 142 aaKnown RBP17.27■□□□□ 0.36
ATG4B-202ENST00000400771 ATF7P17544 494 aaPredicted RBP17.26■□□□□ 0.35
ATG4B-202ENST00000400771 POLGP54098 1239 aaPredicted RBP17.26■□□□□ 0.35
ATG4B-202ENST00000400771 FAM189BP81408 668 aa17.26■□□□□ 0.35
ATG4B-202ENST00000400771 ODR4Q5SWX8 454 aa17.26■□□□□ 0.35
ATG4B-202ENST00000400771 SLC24A5Q71RS6 500 aa17.26■□□□□ 0.35
ATG4B-202ENST00000400771 RHPN2Q8IUC4 686 aa17.26■□□□□ 0.35
ATG4B-202ENST00000400771 TPH2Q8IWU9 490 aa17.26■□□□□ 0.35
ATG4B-202ENST00000400771 FIBCD1Q8N539 461 aa17.26■□□□□ 0.35
ATG4B-202ENST00000400771 SLC7A3Q8WY07 619 aa17.26■□□□□ 0.35
ATG4B-202ENST00000400771 HCSTQ9UBK5 93 aa17.26■□□□□ 0.35
ATG4B-202ENST00000400771 COL4A3BPQ9Y5P4 624 aa17.26■□□□□ 0.35
ATG4B-202ENST00000400771 DENND3A2RUS2 1198 aa17.25■□□□□ 0.35
ATG4B-202ENST00000400771 H3BNC9 293 aa17.25■□□□□ 0.35
ATG4B-202ENST00000400771 GTPBP6O43824 516 aaPredicted RBP17.25■□□□□ 0.35
ATG4B-202ENST00000400771 CTNNB1P35222 781 aa17.25■□□□□ 0.35
ATG4B-202ENST00000400771 RARRES1P49788 294 aa17.25■□□□□ 0.35
ATG4B-202ENST00000400771 BTG3Q14201 252 aaPredicted RBP17.25■□□□□ 0.35
ATG4B-202ENST00000400771 XKR9Q5GH70 373 aa17.25■□□□□ 0.35
ATG4B-202ENST00000400771 TMEM143Q96AN5 459 aa17.25■□□□□ 0.35
ATG4B-202ENST00000400771 NLRP4Q96MN2 994 aa17.25■□□□□ 0.35
ATG4B-202ENST00000400771 SCLT1Q96NL6 688 aa17.25■□□□□ 0.35
ATG4B-202ENST00000400771 JPH2Q9BR39 696 aaPredicted RBP17.25■□□□□ 0.35
ATG4B-202ENST00000400771 MINDY3Q9H8M7 445 aa17.25■□□□□ 0.35
ATG4B-202ENST00000400771 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.25■□□□□ 0.35
ATG4B-202ENST00000400771 ANKEF1Q9NU02 776 aa17.25■□□□□ 0.35
ATG4B-202ENST00000400771 LMCD1Q9NZU5 365 aa17.25■□□□□ 0.35
ATG4B-202ENST00000400771 A0A087WWV3 80 aa17.24■□□□□ 0.35
ATG4B-202ENST00000400771 GAS2O43903 313 aaKnown RBP17.24■□□□□ 0.35
ATG4B-202ENST00000400771 STAG3L1P0CL83 205 aa17.24■□□□□ 0.35
ATG4B-202ENST00000400771 FGFR1P11362 822 aa17.24■□□□□ 0.35
ATG4B-202ENST00000400771 TECP42680 631 aa17.24■□□□□ 0.35
ATG4B-202ENST00000400771 FXR2P51116 673 aaKnown RBP eCLIP17.24■□□□□ 0.35
ATG4B-202ENST00000400771 GNL2Q13823 731 aaKnown RBP17.24■□□□□ 0.35
ATG4B-202ENST00000400771 PAN2Q504Q3 1202 aaKnown RBP17.24■□□□□ 0.35
ATG4B-202ENST00000400771 POTEGQ6S5H5 508 aa17.24■□□□□ 0.35
ATG4B-202ENST00000400771 ZNF598Q86UK7 904 aaKnown RBP17.24■□□□□ 0.35
ATG4B-202ENST00000400771 CATSPER3Q86XQ3 398 aa17.24■□□□□ 0.35
ATG4B-202ENST00000400771 PIGOQ8TEQ8 1089 aa17.24■□□□□ 0.35
ATG4B-202ENST00000400771 PSPC1Q8WXF1 523 aaKnown RBP17.24■□□□□ 0.35
ATG4B-202ENST00000400771 MTRQ99707 1265 aa17.24■□□□□ 0.35
ATG4B-202ENST00000400771 POLR3CQ9BUI4 534 aaPredicted RBP17.24■□□□□ 0.35
ATG4B-202ENST00000400771 GCOM2Q9BZD3 368 aaPredicted RBP17.24■□□□□ 0.35
ATG4B-202ENST00000400771 ELAC1Q9H777 363 aaKnown RBP17.24■□□□□ 0.35
ATG4B-202ENST00000400771 TUFT1Q9NNX1 390 aa17.24■□□□□ 0.35
ATG4B-202ENST00000400771 TMEM161AQ9NX61 479 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms