RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 ANKRD40Q6AI12 368 aa14.72□□□□□ -0.05
VAPA-202ENST00000400000 CYB5R4Q7L1T6 521 aa14.72□□□□□ -0.05
VAPA-202ENST00000400000 ZNF302Q9NR11 478 aa14.72□□□□□ -0.05
VAPA-202ENST00000400000 ETF1P62495 437 aaKnown RBP14.72□□□□□ -0.05
VAPA-202ENST00000400000 GAS2L3Q86XJ1 694 aa14.72□□□□□ -0.05
VAPA-202ENST00000400000 IQCDQ96DY2 449 aa14.72□□□□□ -0.05
VAPA-202ENST00000400000 ERLEC1Q96DZ1 483 aa14.72□□□□□ -0.05
VAPA-202ENST00000400000 TRIM11Q96F44 468 aa14.72□□□□□ -0.05
VAPA-202ENST00000400000 GRIK1P39086 918 aa14.71□□□□□ -0.05
VAPA-202ENST00000400000 COBLL1Q53SF7 1204 aa14.71□□□□□ -0.05
VAPA-202ENST00000400000 KLHL29Q96CT2 875 aa14.71□□□□□ -0.05
VAPA-202ENST00000400000 C11orf70Q9BRQ4 267 aa14.71□□□□□ -0.05
VAPA-202ENST00000400000 TMEM106CQ9BVX2 250 aa14.71□□□□□ -0.05
VAPA-202ENST00000400000 SP110Q9HB58 689 aa14.71□□□□□ -0.05
VAPA-202ENST00000400000 ATP10DQ9P241 1426 aa14.71□□□□□ -0.05
VAPA-202ENST00000400000 ZNF157P51786 506 aaPredicted RBP14.71□□□□□ -0.05
VAPA-202ENST00000400000 RC3H1Q5TC82 1133 aaKnown RBP14.71□□□□□ -0.05
VAPA-202ENST00000400000 ATG16L1Q676U5 607 aa14.71□□□□□ -0.05
VAPA-202ENST00000400000 KRT80Q6KB66 452 aa14.71□□□□□ -0.05
VAPA-202ENST00000400000 ZFYVE19Q96K21 471 aa14.71□□□□□ -0.05
VAPA-202ENST00000400000 DHX36Q9H2U1 1008 aaKnown RBP14.71□□□□□ -0.05
VAPA-202ENST00000400000 ATP6V0A4Q9HBG4 840 aa14.71□□□□□ -0.05
VAPA-202ENST00000400000 SNX24Q9Y343 169 aa14.71□□□□□ -0.05
VAPA-202ENST00000400000 AGRPO00253 132 aa14.71□□□□□ -0.05
VAPA-202ENST00000400000 EEF1DP29692 281 aaKnown RBP14.71□□□□□ -0.05
VAPA-202ENST00000400000 PDCD2Q16342 344 aaPredicted RBP14.71□□□□□ -0.05
VAPA-202ENST00000400000 TAGAPQ8N103 731 aa14.71□□□□□ -0.05
VAPA-202ENST00000400000 ZMYND12Q9H0C1 365 aa14.71□□□□□ -0.05
VAPA-202ENST00000400000 CA4P22748 312 aa14.71□□□□□ -0.05
VAPA-202ENST00000400000 CAPN10Q9HC96 672 aa14.71□□□□□ -0.05
VAPA-202ENST00000400000 ADAM22Q9P0K1 906 aa14.71□□□□□ -0.05
VAPA-202ENST00000400000 UBE4BO95155 1302 aa14.71□□□□□ -0.06
VAPA-202ENST00000400000 PRR23AA6NEV1 266 aa14.71□□□□□ -0.06
VAPA-202ENST00000400000 ATP9BO43861 1147 aa14.71□□□□□ -0.06
VAPA-202ENST00000400000 TMPRSS15P98073 1019 aa14.71□□□□□ -0.06
VAPA-202ENST00000400000 SLC10A5Q5PT55 438 aa14.71□□□□□ -0.06
VAPA-202ENST00000400000 CIAO1O76071 339 aa14.7□□□□□ -0.06
VAPA-202ENST00000400000 CHEK2O96017 543 aa14.7□□□□□ -0.06
VAPA-202ENST00000400000 PRR29P0C7W0 189 aa14.7□□□□□ -0.06
VAPA-202ENST00000400000 POLE2P56282 527 aa14.7□□□□□ -0.06
VAPA-202ENST00000400000 KCNV2Q8TDN2 545 aa14.7□□□□□ -0.06
VAPA-202ENST00000400000 CELF1Q92879 486 aaKnown RBP14.7□□□□□ -0.06
VAPA-202ENST00000400000 CDHR1Q96JP9 859 aa14.7□□□□□ -0.06
VAPA-202ENST00000400000 CCDC90BQ9GZT6 254 aa14.7□□□□□ -0.06
VAPA-202ENST00000400000 TRPV6Q9H1D0 765 aa14.7□□□□□ -0.06
VAPA-202ENST00000400000 BICRAQ9NZM4 1560 aa14.7□□□□□ -0.06
VAPA-202ENST00000400000 NLRP11P59045 1033 aaKnown RBP14.7□□□□□ -0.06
VAPA-202ENST00000400000 TOGARAM2Q6ZUX3 1019 aa14.7□□□□□ -0.06
VAPA-202ENST00000400000 USP33Q8TEY7 942 aa14.7□□□□□ -0.06
VAPA-202ENST00000400000 ELAC2Q9BQ52 826 aaKnown RBP14.7□□□□□ -0.06
VAPA-202ENST00000400000 POLR3CQ9BUI4 534 aaPredicted RBP14.7□□□□□ -0.06
VAPA-202ENST00000400000 NPHP4O75161 1426 aaPredicted RBP14.7□□□□□ -0.06
VAPA-202ENST00000400000 PFDN1O60925 122 aa14.7□□□□□ -0.06
VAPA-202ENST00000400000 SETSIPP0DME0 302 aa14.7□□□□□ -0.06
VAPA-202ENST00000400000 MAPK6Q16659 721 aa14.7□□□□□ -0.06
VAPA-202ENST00000400000 ZC3H12BQ5HYM0 836 aaKnown RBP14.7□□□□□ -0.06
VAPA-202ENST00000400000 POLR3FQ9H1D9 316 aaPredicted RBP14.7□□□□□ -0.06
VAPA-202ENST00000400000 NDST4Q9H3R1 872 aa14.7□□□□□ -0.06
VAPA-202ENST00000400000 CNOT8Q9UFF9 292 aaKnown RBP14.7□□□□□ -0.06
VAPA-202ENST00000400000 CDC23Q9UJX2 597 aa14.7□□□□□ -0.06
VAPA-202ENST00000400000 LAD1O00515 517 aa14.7□□□□□ -0.06
VAPA-202ENST00000400000 C2CD2LO14523 706 aa14.7□□□□□ -0.06
VAPA-202ENST00000400000 ESRRAP11474 423 aaPredicted RBP14.7□□□□□ -0.06
VAPA-202ENST00000400000 ARHGEF1Q92888 912 aaKnown RBP14.7□□□□□ -0.06
VAPA-202ENST00000400000 SPZ1Q9BXG8 430 aa14.7□□□□□ -0.06
VAPA-202ENST00000400000 COA1Q9GZY4 146 aa14.7□□□□□ -0.06
VAPA-202ENST00000400000 DCTN4Q9UJW0 460 aa14.7□□□□□ -0.06
VAPA-202ENST00000400000 EIF3CLB5ME19 914 aaKnown RBP14.7□□□□□ -0.06
VAPA-202ENST00000400000 HMGCS2P54868 508 aa14.7□□□□□ -0.06
VAPA-202ENST00000400000 UBE3AQ05086 875 aa14.7□□□□□ -0.06
VAPA-202ENST00000400000 FAM180AQ6UWF9 173 aa14.7□□□□□ -0.06
VAPA-202ENST00000400000 CEP95Q96GE4 821 aa14.7□□□□□ -0.06
VAPA-202ENST00000400000 EIF3CQ99613 913 aaKnown RBP14.7□□□□□ -0.06
VAPA-202ENST00000400000 ZBTB12Q9Y330 459 aaPredicted RBP14.7□□□□□ -0.06
VAPA-202ENST00000400000 RASGRF2O14827 1237 aa14.69□□□□□ -0.06
VAPA-202ENST00000400000 ATXN3P54252 364 aaPredicted RBP14.69□□□□□ -0.06
VAPA-202ENST00000400000 ULK4Q96C45 1275 aa14.69□□□□□ -0.06
VAPA-202ENST00000400000 GSDMAQ96QA5 445 aa14.69□□□□□ -0.06
VAPA-202ENST00000400000 RWDD2AQ9UIY3 292 aa14.69□□□□□ -0.06
VAPA-202ENST00000400000 CFAP43Q8NDM7 1665 aa14.69□□□□□ -0.06
VAPA-202ENST00000400000 A6NNZ2 444 aa14.69□□□□□ -0.06
VAPA-202ENST00000400000 TUBB8Q3ZCM7 444 aa14.69□□□□□ -0.06
VAPA-202ENST00000400000 RNF146Q9NTX7 359 aa14.69□□□□□ -0.06
VAPA-202ENST00000400000 PPARGC1AQ9UBK2 798 aaKnown RBP14.69□□□□□ -0.06
VAPA-202ENST00000400000 MFSD14CQ5VZR4 134 aa14.69□□□□□ -0.06
VAPA-202ENST00000400000 TEKT4Q8WW24 435 aa14.69□□□□□ -0.06
VAPA-202ENST00000400000 KIF12Q96FN5 646 aa14.69□□□□□ -0.06
VAPA-202ENST00000400000 AK8Q96MA6 479 aa14.69□□□□□ -0.06
VAPA-202ENST00000400000 AGAP3Q96P47 875 aa14.69□□□□□ -0.06
VAPA-202ENST00000400000 FMO2Q99518 471 aa14.69□□□□□ -0.06
VAPA-202ENST00000400000 RPAP3Q9H6T3 665 aaPredicted RBP14.69□□□□□ -0.06
VAPA-202ENST00000400000 TNPO2O14787 897 aaKnown RBP14.69□□□□□ -0.06
VAPA-202ENST00000400000 PTK2BQ14289 1009 aa14.69□□□□□ -0.06
VAPA-202ENST00000400000 PADI6Q6TGC4 694 aa14.69□□□□□ -0.06
VAPA-202ENST00000400000 ZC3H18Q86VM9 953 aaKnown RBP14.69□□□□□ -0.06
VAPA-202ENST00000400000 RMDN1Q96DB5 314 aa14.69□□□□□ -0.06
VAPA-202ENST00000400000 NEUROG2Q9H2A3 272 aa14.69□□□□□ -0.06
VAPA-202ENST00000400000 KIF17Q9P2E2 1029 aa14.69□□□□□ -0.06
VAPA-202ENST00000400000 ABCC2Q92887 1545 aa14.69□□□□□ -0.06
VAPA-202ENST00000400000 ARHGEF25Q86VW2 580 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 555.8 ms