RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 WDR5P61964 334 aaKnown RBP16.73■□□□□ 0.27
IGHV3-53-201ENST00000390627 SMAD3P84022 425 aaKnown RBP16.73■□□□□ 0.27
IGHV3-53-201ENST00000390627 TCTN1Q2MV58 587 aa16.73■□□□□ 0.27
IGHV3-53-201ENST00000390627 RHPN2Q8IUC4 686 aa16.73■□□□□ 0.27
IGHV3-53-201ENST00000390627 KRI1Q8N9T8 703 aaKnown RBP16.73■□□□□ 0.27
IGHV3-53-201ENST00000390627 LINC00301Q8NCQ3 95 aa16.73■□□□□ 0.27
IGHV3-53-201ENST00000390627 MCPH1Q8NEM0 835 aa16.73■□□□□ 0.27
IGHV3-53-201ENST00000390627 RASSF8Q8NHQ8 419 aa16.73■□□□□ 0.27
IGHV3-53-201ENST00000390627 PHOSPHO2Q8TCD6 241 aa16.73■□□□□ 0.27
IGHV3-53-201ENST00000390627 TMEM143Q96AN5 459 aa16.73■□□□□ 0.27
IGHV3-53-201ENST00000390627 CALML4Q96GE6 196 aa16.73■□□□□ 0.27
IGHV3-53-201ENST00000390627 FTHL17Q9BXU8 183 aa16.73■□□□□ 0.27
IGHV3-53-201ENST00000390627 GCOM2Q9BZD3 368 aaPredicted RBP16.73■□□□□ 0.27
IGHV3-53-201ENST00000390627 BHMT2Q9H2M3 363 aa16.73■□□□□ 0.27
IGHV3-53-201ENST00000390627 ADAMTS10Q9H324 1103 aa16.73■□□□□ 0.27
IGHV3-53-201ENST00000390627 AGO3Q9H9G7 860 aaKnown RBP16.73■□□□□ 0.27
IGHV3-53-201ENST00000390627 CDHR5Q9HBB8 845 aa16.73■□□□□ 0.27
IGHV3-53-201ENST00000390627 XPNPEP1Q9NQW7 623 aa16.73■□□□□ 0.27
IGHV3-53-201ENST00000390627 CFAP45Q9UL16 551 aa16.73■□□□□ 0.27
IGHV3-53-201ENST00000390627 ATP6V1DQ9Y5K8 247 aa16.73■□□□□ 0.27
IGHV3-53-201ENST00000390627 COL4A3BPQ9Y5P4 624 aa16.73■□□□□ 0.27
IGHV3-53-201ENST00000390627 PPP6R2O75170 966 aa16.72■□□□□ 0.27
IGHV3-53-201ENST00000390627 EYA4O95677 639 aa16.72■□□□□ 0.27
IGHV3-53-201ENST00000390627 ATP2A2P16615 1042 aaKnown RBP16.72■□□□□ 0.27
IGHV3-53-201ENST00000390627 EIF4BP23588 611 aaKnown RBP16.72■□□□□ 0.27
IGHV3-53-201ENST00000390627 TXLNAP40222 546 aa16.72■□□□□ 0.27
IGHV3-53-201ENST00000390627 GRIN1Q05586 938 aa16.72■□□□□ 0.27
IGHV3-53-201ENST00000390627 MXD4Q14582 209 aaPredicted RBP16.72■□□□□ 0.27
IGHV3-53-201ENST00000390627 FOXD4L6Q3SYB3 417 aaPredicted RBP16.72■□□□□ 0.27
IGHV3-53-201ENST00000390627 PADI6Q6TGC4 694 aa16.72■□□□□ 0.27
IGHV3-53-201ENST00000390627 FOXD4L3Q6VB84 417 aaPredicted RBP16.72■□□□□ 0.27
IGHV3-53-201ENST00000390627 TMEM40Q8WWA1 233 aa16.72■□□□□ 0.27
IGHV3-53-201ENST00000390627 NLRP4Q96MN2 994 aa16.72■□□□□ 0.27
IGHV3-53-201ENST00000390627 INO80BQ9C086 356 aaPredicted RBP16.72■□□□□ 0.27
IGHV3-53-201ENST00000390627 CSRNP2Q9H175 543 aa16.72■□□□□ 0.27
IGHV3-53-201ENST00000390627 TFIP11Q9UBB9 837 aaKnown RBP16.72■□□□□ 0.27
IGHV3-53-201ENST00000390627 DAXXQ9UER7 740 aaPredicted RBP16.72■□□□□ 0.27
IGHV3-53-201ENST00000390627 PADI3Q9ULW8 664 aa16.72■□□□□ 0.27
IGHV3-53-201ENST00000390627 NOC2LQ9Y3T9 749 aaKnown RBP16.72■□□□□ 0.27
IGHV3-53-201ENST00000390627 MICAL3Q7RTP6 2002 aa16.71■□□□□ 0.27
IGHV3-53-201ENST00000390627 A0A087WZ62 844 aa16.71■□□□□ 0.27
IGHV3-53-201ENST00000390627 SPTLC2O15270 562 aa16.71■□□□□ 0.27
IGHV3-53-201ENST00000390627 AMHP03971 560 aa16.71■□□□□ 0.27
IGHV3-53-201ENST00000390627 DARSP14868 501 aaKnown RBP16.71■□□□□ 0.27
IGHV3-53-201ENST00000390627 CYP11B2P19099 503 aa16.71■□□□□ 0.27
IGHV3-53-201ENST00000390627 LAMTOR4Q0VGL1 99 aa16.71■□□□□ 0.27
IGHV3-53-201ENST00000390627 NFX1Q12986 1120 aaKnown RBP16.71■□□□□ 0.27
IGHV3-53-201ENST00000390627 GRB10Q13322 594 aa16.71■□□□□ 0.27
IGHV3-53-201ENST00000390627 TFDP1Q14186 410 aa16.71■□□□□ 0.27
IGHV3-53-201ENST00000390627 TMEM119Q4V9L6 283 aa16.71■□□□□ 0.27
IGHV3-53-201ENST00000390627 FAM228AQ86W67 206 aa16.71■□□□□ 0.27
IGHV3-53-201ENST00000390627 KCNG4Q8TDN1 519 aa16.71■□□□□ 0.27
IGHV3-53-201ENST00000390627 PRPF31Q8WWY3 499 aaKnown RBP16.71■□□□□ 0.27
IGHV3-53-201ENST00000390627 ZNF668Q96K58 619 aaPredicted RBP16.71■□□□□ 0.27
IGHV3-53-201ENST00000390627 PNMA5Q96PV4 448 aa16.71■□□□□ 0.27
IGHV3-53-201ENST00000390627 FDXACB1Q9BRP7 624 aaPredicted RBP16.71■□□□□ 0.27
IGHV3-53-201ENST00000390627 CCSER1Q9C0I3 900 aa16.71■□□□□ 0.27
IGHV3-53-201ENST00000390627 ERVK-5Q9HDB9 667 aa16.71■□□□□ 0.27
IGHV3-53-201ENST00000390627 E9PMD0 336 aa16.7■□□□□ 0.26
IGHV3-53-201ENST00000390627 SOX1O00570 391 aaPredicted RBP16.7■□□□□ 0.26
IGHV3-53-201ENST00000390627 FXR1P51114 621 aaKnown RBP eCLIP16.7■□□□□ 0.26
IGHV3-53-201ENST00000390627 NUCB2P80303 420 aa16.7■□□□□ 0.26
IGHV3-53-201ENST00000390627 DNM1Q05193 864 aaKnown RBP16.7■□□□□ 0.26
IGHV3-53-201ENST00000390627 KSR1Q8IVT5 923 aa16.7■□□□□ 0.26
IGHV3-53-201ENST00000390627 CLIC6Q96NY7 704 aa16.7■□□□□ 0.26
IGHV3-53-201ENST00000390627 POLR3FQ9H1D9 316 aaPredicted RBP16.7■□□□□ 0.26
IGHV3-53-201ENST00000390627 ST3GAL5Q9UNP4 418 aa16.7■□□□□ 0.26
IGHV3-53-201ENST00000390627 ZDHHC9Q9Y397 364 aa16.7■□□□□ 0.26
IGHV3-53-201ENST00000390627 LAMA3Q16787 3333 aa16.7■□□□□ 0.26
IGHV3-53-201ENST00000390627 SFPQP23246 707 aaKnown RBP eCLIP16.69■□□□□ 0.26
IGHV3-53-201ENST00000390627 ARL2P36404 184 aa16.69■□□□□ 0.26
IGHV3-53-201ENST00000390627 PHKA2P46019 1235 aa16.69■□□□□ 0.26
IGHV3-53-201ENST00000390627 KRT85P78386 507 aa16.69■□□□□ 0.26
IGHV3-53-201ENST00000390627 DEFB103AP81534 67 aa16.69■□□□□ 0.26
IGHV3-53-201ENST00000390627 RAB30Q15771 203 aa16.69■□□□□ 0.26
IGHV3-53-201ENST00000390627 FAM102BQ5T8I3 360 aa16.69■□□□□ 0.26
IGHV3-53-201ENST00000390627 FAM109BQ6ICB4 259 aaPredicted RBP16.69■□□□□ 0.26
IGHV3-53-201ENST00000390627 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.69■□□□□ 0.26
IGHV3-53-201ENST00000390627 MAEAQ7L5Y9 396 aa16.69■□□□□ 0.26
IGHV3-53-201ENST00000390627 KCNK18Q7Z418 384 aa16.69■□□□□ 0.26
IGHV3-53-201ENST00000390627 HERC6Q8IVU3 1022 aa16.69■□□□□ 0.26
IGHV3-53-201ENST00000390627 MYOCDQ8IZQ8 938 aa16.69■□□□□ 0.26
IGHV3-53-201ENST00000390627 RNF149Q8NC42 400 aa16.69■□□□□ 0.26
IGHV3-53-201ENST00000390627 SYMPKQ92797 1274 aaKnown RBP16.69■□□□□ 0.26
IGHV3-53-201ENST00000390627 PLIN2Q99541 437 aa16.69■□□□□ 0.26
IGHV3-53-201ENST00000390627 CCDC39Q9UFE4 941 aa16.69■□□□□ 0.26
IGHV3-53-201ENST00000390627 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.68■□□□□ 0.26
IGHV3-53-201ENST00000390627 GRXCR1A8MXD5 290 aa16.68■□□□□ 0.26
IGHV3-53-201ENST00000390627 SSBP05455 408 aaKnown RBP eCLIP16.68■□□□□ 0.26
IGHV3-53-201ENST00000390627 SRGAP2CP0DJJ0 459 aa16.68■□□□□ 0.26
IGHV3-53-201ENST00000390627 PLCG1P19174 1290 aa16.68■□□□□ 0.26
IGHV3-53-201ENST00000390627 POU5F1BQ06416 359 aa16.68■□□□□ 0.26
IGHV3-53-201ENST00000390627 KARSQ15046 597 aaKnown RBP16.68■□□□□ 0.26
IGHV3-53-201ENST00000390627 SPECC1Q5M775 1068 aa16.68■□□□□ 0.26
IGHV3-53-201ENST00000390627 GPR153Q6NV75 609 aa16.68■□□□□ 0.26
IGHV3-53-201ENST00000390627 SRGAP1Q7Z6B7 1085 aa16.68■□□□□ 0.26
IGHV3-53-201ENST00000390627 ASAP3Q8TDY4 903 aa16.68■□□□□ 0.26
IGHV3-53-201ENST00000390627 KIFAP3Q92845 792 aa16.68■□□□□ 0.26
IGHV3-53-201ENST00000390627 LRCH3Q96II8 777 aa16.68■□□□□ 0.26
IGHV3-53-201ENST00000390627 EPSTI1Q96J88 318 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms