RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 PCK1P35558 622 aa11.7□□□□□ -0.54
PCDHGA1-201ENST00000378105 CETN1Q12798 172 aa11.7□□□□□ -0.54
PCDHGA1-201ENST00000378105 BRD3Q15059 726 aa11.7□□□□□ -0.54
PCDHGA1-201ENST00000378105 AGAP9Q5VTM2 703 aa11.7□□□□□ -0.54
PCDHGA1-201ENST00000378105 ADALQ6DHV7 355 aa11.7□□□□□ -0.54
PCDHGA1-201ENST00000378105 VMP1Q96GC9 406 aa11.7□□□□□ -0.54
PCDHGA1-201ENST00000378105 SEZ6LQ9BYH1 1024 aa11.7□□□□□ -0.54
PCDHGA1-201ENST00000378105 LUC7LQ9NQ29 371 aaKnown RBP11.7□□□□□ -0.54
PCDHGA1-201ENST00000378105 ZNF70Q9UC06 446 aaPredicted RBP11.7□□□□□ -0.54
PCDHGA1-201ENST00000378105 DSEQ9UL01 958 aa11.7□□□□□ -0.54
PCDHGA1-201ENST00000378105 DNM3Q9UQ16 869 aa11.7□□□□□ -0.54
PCDHGA1-201ENST00000378105 PCDHB6Q9Y5E3 794 aa11.7□□□□□ -0.54
PCDHGA1-201ENST00000378105 RASSF10A6NK89 507 aa11.7□□□□□ -0.54
PCDHGA1-201ENST00000378105 DDHD2O94830 711 aa11.7□□□□□ -0.54
PCDHGA1-201ENST00000378105 MMP1P03956 469 aa11.7□□□□□ -0.54
PCDHGA1-201ENST00000378105 NDUFA8P51970 172 aa11.7□□□□□ -0.54
PCDHGA1-201ENST00000378105 CLUL1Q15846 466 aa11.7□□□□□ -0.54
PCDHGA1-201ENST00000378105 DCAF17Q5H9S7 520 aaPredicted RBP11.7□□□□□ -0.54
PCDHGA1-201ENST00000378105 POTEEQ6S8J3 1075 aa11.7□□□□□ -0.54
PCDHGA1-201ENST00000378105 FAM47EQ6ZV65 393 aa11.7□□□□□ -0.54
PCDHGA1-201ENST00000378105 FERMT2Q96AC1 680 aa11.7□□□□□ -0.54
PCDHGA1-201ENST00000378105 CTNND2Q9UQB3 1225 aa11.7□□□□□ -0.54
PCDHGA1-201ENST00000378105 TDRKHQ9Y2W6 561 aaKnown RBP11.7□□□□□ -0.54
PCDHGA1-201ENST00000378105 SYNRGQ9UMZ2 1314 aa11.69□□□□□ -0.54
PCDHGA1-201ENST00000378105 NAV1Q8NEY1 1877 aa11.69□□□□□ -0.54
PCDHGA1-201ENST00000378105 TMEM214Q6NUQ4 689 aaKnown RBP11.69□□□□□ -0.54
PCDHGA1-201ENST00000378105 SH2D3CQ8N5H7 860 aa11.69□□□□□ -0.54
PCDHGA1-201ENST00000378105 GABPB2Q8TAK5 448 aaPredicted RBP11.69□□□□□ -0.54
PCDHGA1-201ENST00000378105 OXER1Q8TDS5 423 aa11.69□□□□□ -0.54
PCDHGA1-201ENST00000378105 CLSTN2Q9H4D0 955 aa11.69□□□□□ -0.54
PCDHGA1-201ENST00000378105 MLXIPQ9HAP2 919 aa11.69□□□□□ -0.54
PCDHGA1-201ENST00000378105 RAVER2Q9HCJ3 691 aaKnown RBP11.69□□□□□ -0.54
PCDHGA1-201ENST00000378105 TSC22D4Q9Y3Q8 395 aa11.69□□□□□ -0.54
PCDHGA1-201ENST00000378105 ETS2P15036 469 aa11.69□□□□□ -0.54
PCDHGA1-201ENST00000378105 GUCY1A2P33402 732 aa11.69□□□□□ -0.54
PCDHGA1-201ENST00000378105 SARSP49591 514 aaKnown RBP11.69□□□□□ -0.54
PCDHGA1-201ENST00000378105 HMGCS2P54868 508 aa11.69□□□□□ -0.54
PCDHGA1-201ENST00000378105 KCTD2Q14681 263 aa11.69□□□□□ -0.54
PCDHGA1-201ENST00000378105 POSTNQ15063 836 aa11.69□□□□□ -0.54
PCDHGA1-201ENST00000378105 DPP9Q86TI2 863 aa11.69□□□□□ -0.54
PCDHGA1-201ENST00000378105 CCDC125Q86Z20 511 aa11.69□□□□□ -0.54
PCDHGA1-201ENST00000378105 NEDD1Q8NHV4 660 aa11.69□□□□□ -0.54
PCDHGA1-201ENST00000378105 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.69□□□□□ -0.54
PCDHGA1-201ENST00000378105 CLMNQ96JQ2 1002 aa11.69□□□□□ -0.54
PCDHGA1-201ENST00000378105 ZNF512BQ96KM6 892 aaPredicted RBP11.69□□□□□ -0.54
PCDHGA1-201ENST00000378105 NAP1L4Q99733 375 aaKnown RBP11.69□□□□□ -0.54
PCDHGA1-201ENST00000378105 SH3GL1Q99961 368 aa11.69□□□□□ -0.54
PCDHGA1-201ENST00000378105 VPS16Q9H269 839 aa11.69□□□□□ -0.54
PCDHGA1-201ENST00000378105 KLHL42Q9P2K6 505 aa11.69□□□□□ -0.54
PCDHGA1-201ENST00000378105 IP6K2Q9UHH9 426 aa11.69□□□□□ -0.54
PCDHGA1-201ENST00000378105 PCDHA4Q9UN74 947 aa11.69□□□□□ -0.54
PCDHGA1-201ENST00000378105 RPAP1Q9BWH6 1393 aaPredicted RBP11.69□□□□□ -0.54
PCDHGA1-201ENST00000378105 EIF3HO15372 352 aaKnown RBP eCLIP11.69□□□□□ -0.54
PCDHGA1-201ENST00000378105 COBLO75128 1261 aa11.69□□□□□ -0.54
PCDHGA1-201ENST00000378105 DDX5P17844 614 aaKnown RBP11.69□□□□□ -0.54
PCDHGA1-201ENST00000378105 CCNFP41002 786 aa11.69□□□□□ -0.54
PCDHGA1-201ENST00000378105 SPA17Q15506 151 aa11.69□□□□□ -0.54
PCDHGA1-201ENST00000378105 MIER3Q7Z3K6 550 aa11.69□□□□□ -0.54
PCDHGA1-201ENST00000378105 MYOZ2Q9NPC6 264 aa11.69□□□□□ -0.54
PCDHGA1-201ENST00000378105 NOD1Q9Y239 953 aa11.69□□□□□ -0.54
PCDHGA1-201ENST00000378105 TMEM247A6NEH6 219 aa11.68□□□□□ -0.54
PCDHGA1-201ENST00000378105 PRPF3O43395 683 aaKnown RBP11.68□□□□□ -0.54
PCDHGA1-201ENST00000378105 ENDOUP21128 410 aaKnown RBP11.68□□□□□ -0.54
PCDHGA1-201ENST00000378105 RFC5P40937 340 aa11.68□□□□□ -0.54
PCDHGA1-201ENST00000378105 USP14P54578 494 aa11.68□□□□□ -0.54
PCDHGA1-201ENST00000378105 OXCT1P55809 520 aa11.68□□□□□ -0.54
PCDHGA1-201ENST00000378105 ARPC4P59998 168 aa11.68□□□□□ -0.54
PCDHGA1-201ENST00000378105 TAF11Q15544 211 aa11.68□□□□□ -0.54
PCDHGA1-201ENST00000378105 SLC44A4Q53GD3 710 aa11.68□□□□□ -0.54
PCDHGA1-201ENST00000378105 CCDC170Q8IYT3 715 aa11.68□□□□□ -0.54
PCDHGA1-201ENST00000378105 SAMD3Q8N6K7 520 aa11.68□□□□□ -0.54
PCDHGA1-201ENST00000378105 ZBTB8BQ8NAP8 495 aaPredicted RBP11.68□□□□□ -0.54
PCDHGA1-201ENST00000378105 SYMPKQ92797 1274 aaKnown RBP11.68□□□□□ -0.54
PCDHGA1-201ENST00000378105 CCDC127Q96BQ5 260 aa11.68□□□□□ -0.54
PCDHGA1-201ENST00000378105 CSRNP2Q9H175 543 aa11.68□□□□□ -0.54
PCDHGA1-201ENST00000378105 DEFB129Q9H1M3 183 aa11.68□□□□□ -0.54
PCDHGA1-201ENST00000378105 AZI2Q9H6S1 392 aa11.68□□□□□ -0.54
PCDHGA1-201ENST00000378105 ANKZF1Q9H8Y5 726 aa11.68□□□□□ -0.54
PCDHGA1-201ENST00000378105 PPANQ9NQ55 473 aaKnown RBP11.68□□□□□ -0.54
PCDHGA1-201ENST00000378105 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.68□□□□□ -0.54
PCDHGA1-201ENST00000378105 RANBP2P49792 3224 aaKnown RBP11.68□□□□□ -0.54
PCDHGA1-201ENST00000378105 TMEM221A6NGB7 291 aa11.68□□□□□ -0.54
PCDHGA1-201ENST00000378105 DDNO94850 711 aaPredicted RBP11.68□□□□□ -0.54
PCDHGA1-201ENST00000378105 GUCY1A3Q02108 690 aa11.68□□□□□ -0.54
PCDHGA1-201ENST00000378105 ZNF362Q5T0B9 420 aaPredicted RBP11.68□□□□□ -0.54
PCDHGA1-201ENST00000378105 C9orf131Q5VYM1 1079 aa11.68□□□□□ -0.54
PCDHGA1-201ENST00000378105 TBC1D1Q86TI0 1168 aaPredicted RBP11.68□□□□□ -0.54
PCDHGA1-201ENST00000378105 MYCT1Q8N699 235 aa11.68□□□□□ -0.54
PCDHGA1-201ENST00000378105 PAF1Q8N7H5 531 aa11.68□□□□□ -0.54
PCDHGA1-201ENST00000378105 SMYD1Q8NB12 490 aa11.68□□□□□ -0.54
PCDHGA1-201ENST00000378105 RDH13Q8NBN7 331 aa11.68□□□□□ -0.54
PCDHGA1-201ENST00000378105 ZWILCHQ9H900 591 aa11.68□□□□□ -0.54
PCDHGA1-201ENST00000378105 GPR75-ASB3A0A0A6YYF3 556 aa11.68□□□□□ -0.54
PCDHGA1-201ENST00000378105 MAGEB3O15480 346 aa11.68□□□□□ -0.54
PCDHGA1-201ENST00000378105 KRT13P13646 458 aa11.68□□□□□ -0.54
PCDHGA1-201ENST00000378105 PABPC4Q13310 644 aaKnown RBP eCLIP11.68□□□□□ -0.54
PCDHGA1-201ENST00000378105 GRIK5Q16478 980 aa11.68□□□□□ -0.54
PCDHGA1-201ENST00000378105 GRAMD1CQ8IYS0 662 aa11.68□□□□□ -0.54
PCDHGA1-201ENST00000378105 PPFIBP2Q8ND30 876 aa11.68□□□□□ -0.54
PCDHGA1-201ENST00000378105 DESI2Q9BSY9 194 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms