RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 TKFCQ3LXA3 575 aa8.82□□□□□ -1
CKAP2-203ENST00000378037 ALKBH5Q6P6C2 394 aaKnown RBP8.82□□□□□ -1
CKAP2-203ENST00000378037 B4GALNT4Q76KP1 1039 aa8.82□□□□□ -1
CKAP2-203ENST00000378037 TMEM130Q8N3G9 435 aa8.82□□□□□ -1
CKAP2-203ENST00000378037 GLT8D2Q9H1C3 349 aa8.82□□□□□ -1
CKAP2-203ENST00000378037 HSD3B7Q9H2F3 369 aa8.82□□□□□ -1
CKAP2-203ENST00000378037 ACAD9Q9H845 621 aa8.82□□□□□ -1
CKAP2-203ENST00000378037 PDE11AQ9HCR9 933 aa8.82□□□□□ -1
CKAP2-203ENST00000378037 SUGT1Q9Y2Z0 365 aa8.82□□□□□ -1
CKAP2-203ENST00000378037 A0A0C4DFX4 3053 aa8.82□□□□□ -1
CKAP2-203ENST00000378037 DYNC1LI2O43237 492 aaPredicted RBP8.81□□□□□ -1
CKAP2-203ENST00000378037 RRP9O43818 475 aaKnown RBP8.81□□□□□ -1
CKAP2-203ENST00000378037 ERLIN1O75477 346 aa8.81□□□□□ -1
CKAP2-203ENST00000378037 PALMO75781 387 aa8.81□□□□□ -1
CKAP2-203ENST00000378037 SLITRK3O94933 977 aa8.81□□□□□ -1
CKAP2-203ENST00000378037 ZNF286BP0CG31 522 aa8.81□□□□□ -1
CKAP2-203ENST00000378037 EEF1GP26641 437 aaKnown RBP8.81□□□□□ -1
CKAP2-203ENST00000378037 DLG4P78352 724 aa8.81□□□□□ -1
CKAP2-203ENST00000378037 PRKCEQ02156 737 aa8.81□□□□□ -1
CKAP2-203ENST00000378037 DHX9Q08211 1270 aaKnown RBP8.81□□□□□ -1
CKAP2-203ENST00000378037 CDO1Q16878 200 aa8.81□□□□□ -1
CKAP2-203ENST00000378037 PAN2Q504Q3 1202 aaKnown RBP8.81□□□□□ -1
CKAP2-203ENST00000378037 BSPRYQ5W0U4 402 aa8.81□□□□□ -1
CKAP2-203ENST00000378037 ERO1AQ96HE7 468 aa8.81□□□□□ -1
CKAP2-203ENST00000378037 NOX5Q96PH1 765 aa8.81□□□□□ -1
CKAP2-203ENST00000378037 PSMD1Q99460 953 aa8.81□□□□□ -1
CKAP2-203ENST00000378037 PAIP2Q9BPZ3 127 aaKnown RBP8.81□□□□□ -1
CKAP2-203ENST00000378037 POLR3FQ9H1D9 316 aaPredicted RBP8.81□□□□□ -1
CKAP2-203ENST00000378037 JPH1Q9HDC5 661 aaPredicted RBP8.81□□□□□ -1
CKAP2-203ENST00000378037 A1CFQ9NQ94 594 aaKnown RBP8.81□□□□□ -1
CKAP2-203ENST00000378037 CGNQ9P2M7 1197 aaKnown RBP8.81□□□□□ -1
CKAP2-203ENST00000378037 SPEF2Q9C093 1822 aa8.81□□□□□ -1
CKAP2-203ENST00000378037 CYP26A1O43174 497 aa8.81□□□□□ -1
CKAP2-203ENST00000378037 PTPRAP18433 802 aa8.81□□□□□ -1
CKAP2-203ENST00000378037 CCND2P30279 289 aa8.81□□□□□ -1
CKAP2-203ENST00000378037 PSMC2P35998 433 aaKnown RBP8.81□□□□□ -1
CKAP2-203ENST00000378037 RCAN1P53805 252 aa8.81□□□□□ -1
CKAP2-203ENST00000378037 USP14P54578 494 aa8.81□□□□□ -1
CKAP2-203ENST00000378037 GUCY2DQ02846 1103 aa8.81□□□□□ -1
CKAP2-203ENST00000378037 TRAF1Q13077 416 aa8.81□□□□□ -1
CKAP2-203ENST00000378037 DRAP1Q14919 205 aaPredicted RBP8.81□□□□□ -1
CKAP2-203ENST00000378037 STXBP2Q15833 593 aa8.81□□□□□ -1
CKAP2-203ENST00000378037 WDR44Q5JSH3 913 aa8.81□□□□□ -1
CKAP2-203ENST00000378037 TMEM63BQ5T3F8 832 aa8.81□□□□□ -1
CKAP2-203ENST00000378037 LLGL2Q6P1M3 1020 aa8.81□□□□□ -1
CKAP2-203ENST00000378037 SCYL2Q6P3W7 929 aa8.81□□□□□ -1
CKAP2-203ENST00000378037 GSTA5Q7RTV2 222 aa8.81□□□□□ -1
CKAP2-203ENST00000378037 C4orf32Q8N8J7 132 aa8.81□□□□□ -1
CKAP2-203ENST00000378037 AGBL3Q8NEM8 1001 aa8.81□□□□□ -1
CKAP2-203ENST00000378037 UPF1Q92900 1129 aaKnown RBP eCLIP8.81□□□□□ -1
CKAP2-203ENST00000378037 OPTNQ96CV9 577 aa8.81□□□□□ -1
CKAP2-203ENST00000378037 PARD6BQ9BYG5 372 aa8.81□□□□□ -1
CKAP2-203ENST00000378037 WRAP73Q9P2S5 460 aaPredicted RBP8.81□□□□□ -1
CKAP2-203ENST00000378037 LIMA1Q9UHB6 759 aaKnown RBP8.81□□□□□ -1
CKAP2-203ENST00000378037 PCDHA13Q9Y5I0 950 aa8.81□□□□□ -1
CKAP2-203ENST00000378037 WDR64B1ANS9 1081 aa8.81□□□□□ -1
CKAP2-203ENST00000378037 VWA5AO00534 786 aa8.81□□□□□ -1
CKAP2-203ENST00000378037 GJB6O95452 261 aa8.81□□□□□ -1
CKAP2-203ENST00000378037 NEFHP12036 1026 aa8.81□□□□□ -1
CKAP2-203ENST00000378037 PIK3CAP42336 1068 aa8.81□□□□□ -1
CKAP2-203ENST00000378037 CLCN6P51797 869 aa8.81□□□□□ -1
CKAP2-203ENST00000378037 GIT2Q14161 759 aa8.81□□□□□ -1
CKAP2-203ENST00000378037 C8orf74Q6P047 294 aa8.81□□□□□ -1
CKAP2-203ENST00000378037 OTUD6AQ7L8S5 288 aa8.81□□□□□ -1
CKAP2-203ENST00000378037 UBLCP1Q8WVY7 318 aaPredicted RBP8.81□□□□□ -1
CKAP2-203ENST00000378037 MTA3Q9BTC8 594 aa8.81□□□□□ -1
CKAP2-203ENST00000378037 PDGFCQ9NRA1 345 aa8.81□□□□□ -1
CKAP2-203ENST00000378037 DDX41Q9UJV9 622 aaKnown RBP8.81□□□□□ -1
CKAP2-203ENST00000378037 CAPN6Q9Y6Q1 641 aa8.81□□□□□ -1
CKAP2-203ENST00000378037 A0A087X0T9 212 aa8.8□□□□□ -1
CKAP2-203ENST00000378037 GRAP2O75791 330 aa8.8□□□□□ -1
CKAP2-203ENST00000378037 FAM228BP0C875 321 aa8.8□□□□□ -1
CKAP2-203ENST00000378037 EPHX2P34913 555 aa8.8□□□□□ -1
CKAP2-203ENST00000378037 USP11P51784 963 aa8.8□□□□□ -1
CKAP2-203ENST00000378037 TMEM132BQ14DG7 1078 aa8.8□□□□□ -1
CKAP2-203ENST00000378037 TMEM270Q6UE05 265 aa8.8□□□□□ -1
CKAP2-203ENST00000378037 SCYL3Q8IZE3 742 aa8.8□□□□□ -1
CKAP2-203ENST00000378037 FBXL16Q8N461 479 aa8.8□□□□□ -1
CKAP2-203ENST00000378037 MXRA8Q9BRK3 442 aa8.8□□□□□ -1
CKAP2-203ENST00000378037 PDCD2LQ9BRP1 358 aa8.8□□□□□ -1
CKAP2-203ENST00000378037 MSTO1Q9BUK6 570 aa8.8□□□□□ -1
CKAP2-203ENST00000378037 TSKSQ9UJT2 592 aa8.8□□□□□ -1
CKAP2-203ENST00000378037 CCL15-CCL14A0A0B4J2E2 113 aa8.8□□□□□ -1
CKAP2-203ENST00000378037 ANKRD62A6NC57 917 aa8.8□□□□□ -1
CKAP2-203ENST00000378037 ZSCAN5CA6NGD5 496 aaPredicted RBP8.8□□□□□ -1
CKAP2-203ENST00000378037 KLRC4O43908 158 aa8.8□□□□□ -1
CKAP2-203ENST00000378037 VTNP04004 478 aa8.8□□□□□ -1
CKAP2-203ENST00000378037 P4HBP07237 508 aaKnown RBP8.8□□□□□ -1
CKAP2-203ENST00000378037 WEE2P0C1S8 567 aa8.8□□□□□ -1
CKAP2-203ENST00000378037 RPA1P27694 616 aa8.8□□□□□ -1
CKAP2-203ENST00000378037 HIRAP54198 1017 aaPredicted RBP8.8□□□□□ -1
CKAP2-203ENST00000378037 ZBED6P86452 979 aa8.8□□□□□ -1
CKAP2-203ENST00000378037 CCL15Q16663 113 aa8.8□□□□□ -1
CKAP2-203ENST00000378037 DCUN1D2Q6PH85 259 aa8.8□□□□□ -1
CKAP2-203ENST00000378037 IRF2BP1Q8IU81 584 aa8.8□□□□□ -1
CKAP2-203ENST00000378037 COG1Q8WTW3 980 aa8.8□□□□□ -1
CKAP2-203ENST00000378037 ATP6V0A1Q93050 837 aa8.8□□□□□ -1
CKAP2-203ENST00000378037 HOXC10Q9NYD6 342 aa8.8□□□□□ -1
CKAP2-203ENST00000378037 SLC9A2Q9UBY0 812 aa8.8□□□□□ -1
CKAP2-203ENST00000378037 PPP1R9AQ9ULJ8 1098 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms