RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 FAM221BA6H8Z2 402 aa8.73□□□□□ -1.01
UBE2D3-204ENST00000349311 FAM83GA6ND36 823 aa8.73□□□□□ -1.01
UBE2D3-204ENST00000349311 ZNF503-AS2A6NEH8 195 aa8.73□□□□□ -1.01
UBE2D3-204ENST00000349311 GOLGA6L9A6NEM1 432 aa8.73□□□□□ -1.01
UBE2D3-204ENST00000349311 C2orf71A6NGG8 1288 aa8.73□□□□□ -1.01
UBE2D3-204ENST00000349311 SMC2O95347 1197 aa8.73□□□□□ -1.01
UBE2D3-204ENST00000349311 TBC1D8O95759 1140 aa8.73□□□□□ -1.01
UBE2D3-204ENST00000349311 CALRP27797 417 aaKnown RBP8.73□□□□□ -1.01
UBE2D3-204ENST00000349311 HOXC12P31275 282 aa8.73□□□□□ -1.01
UBE2D3-204ENST00000349311 CCT4P50991 539 aaKnown RBP8.73□□□□□ -1.01
UBE2D3-204ENST00000349311 CORO7P57737 925 aa8.73□□□□□ -1.01
UBE2D3-204ENST00000349311 TUBB4BP68371 445 aa8.73□□□□□ -1.01
UBE2D3-204ENST00000349311 BRD3Q15059 726 aa8.73□□□□□ -1.01
UBE2D3-204ENST00000349311 DPY19L1Q2PZI1 675 aa8.73□□□□□ -1.01
UBE2D3-204ENST00000349311 HSF5Q4G112 596 aaPredicted RBP8.73□□□□□ -1.01
UBE2D3-204ENST00000349311 VPS53Q5VIR6 699 aa8.73□□□□□ -1.01
UBE2D3-204ENST00000349311 CC2D1AQ6P1N0 951 aaPredicted RBP8.73□□□□□ -1.01
UBE2D3-204ENST00000349311 RUFY3Q7L099 469 aa8.73□□□□□ -1.01
UBE2D3-204ENST00000349311 ZSWIM9Q86XI8 627 aa8.73□□□□□ -1.01
UBE2D3-204ENST00000349311 JMYQ8N9B5 988 aa8.73□□□□□ -1.01
UBE2D3-204ENST00000349311 KREMEN2Q8NCW0 462 aa8.73□□□□□ -1.01
UBE2D3-204ENST00000349311 NLGN2Q8NFZ4 835 aa8.73□□□□□ -1.01
UBE2D3-204ENST00000349311 RILPL2Q969X0 211 aa8.73□□□□□ -1.01
UBE2D3-204ENST00000349311 TMX1Q9H3N1 280 aa8.73□□□□□ -1.01
UBE2D3-204ENST00000349311 PRDM11Q9NQV5 511 aa8.73□□□□□ -1.01
UBE2D3-204ENST00000349311 ANO10Q9NW15 660 aa8.73□□□□□ -1.01
UBE2D3-204ENST00000349311 TRMT1Q9NXH9 659 aaKnown RBP8.73□□□□□ -1.01
UBE2D3-204ENST00000349311 DACT1Q9NYF0 836 aa8.73□□□□□ -1.01
UBE2D3-204ENST00000349311 LCMT1Q9UIC8 334 aa8.73□□□□□ -1.01
UBE2D3-204ENST00000349311 SNX14Q9Y5W7 946 aa8.73□□□□□ -1.01
UBE2D3-204ENST00000349311 A0A087WUV0 522 aaPredicted RBP8.72□□□□□ -1.01
UBE2D3-204ENST00000349311 STXBP3O00186 592 aa8.72□□□□□ -1.01
UBE2D3-204ENST00000349311 ARNTLO00327 626 aa8.72□□□□□ -1.01
UBE2D3-204ENST00000349311 NPHP1O15259 732 aa8.72□□□□□ -1.01
UBE2D3-204ENST00000349311 GLI1P08151 1106 aa8.72□□□□□ -1.01
UBE2D3-204ENST00000349311 RAC2P15153 192 aa8.72□□□□□ -1.01
UBE2D3-204ENST00000349311 TRHRP34981 398 aaPredicted RBP8.72□□□□□ -1.01
UBE2D3-204ENST00000349311 EIF5P55010 431 aaKnown RBP8.72□□□□□ -1.01
UBE2D3-204ENST00000349311 GSCP56915 257 aaPredicted RBP8.72□□□□□ -1.01
UBE2D3-204ENST00000349311 EVCP57679 992 aa8.72□□□□□ -1.01
UBE2D3-204ENST00000349311 PPP2R2AP63151 447 aa8.72□□□□□ -1.01
UBE2D3-204ENST00000349311 SATB1Q01826 763 aa8.72□□□□□ -1.01
UBE2D3-204ENST00000349311 TRDNQ13061 729 aa8.72□□□□□ -1.01
UBE2D3-204ENST00000349311 TAF7Q15545 349 aaPredicted RBP8.72□□□□□ -1.01
UBE2D3-204ENST00000349311 CAMK4Q16566 473 aa8.72□□□□□ -1.01
UBE2D3-204ENST00000349311 HOMER1Q86YM7 354 aa8.72□□□□□ -1.01
UBE2D3-204ENST00000349311 REXO1L1PQ8IX06 675 aa8.72□□□□□ -1.01
UBE2D3-204ENST00000349311 CEP57L1Q8IYX8 460 aa8.72□□□□□ -1.01
UBE2D3-204ENST00000349311 TSPYL6Q8N831 410 aa8.72□□□□□ -1.01
UBE2D3-204ENST00000349311 GPATCH11Q8N954 259 aa8.72□□□□□ -1.01
UBE2D3-204ENST00000349311 IL17REQ8NFR9 667 aa8.72□□□□□ -1.01
UBE2D3-204ENST00000349311 NPLOC4Q8TAT6 608 aa8.72□□□□□ -1.01
UBE2D3-204ENST00000349311 ABHD4Q8TB40 342 aa8.72□□□□□ -1.01
UBE2D3-204ENST00000349311 BICD2Q8TD16 824 aa8.72□□□□□ -1.01
UBE2D3-204ENST00000349311 BTN2A2Q8WVV5 523 aa8.72□□□□□ -1.01
UBE2D3-204ENST00000349311 RABGGTAQ92696 567 aa8.72□□□□□ -1.01
UBE2D3-204ENST00000349311 ASIC4Q96FT7 647 aa8.72□□□□□ -1.01
UBE2D3-204ENST00000349311 C1orf159Q96HA4 380 aa8.72□□□□□ -1.01
UBE2D3-204ENST00000349311 CCDC140Q96MF4 163 aa8.72□□□□□ -1.01
UBE2D3-204ENST00000349311 JMJD8Q96S16 334 aa8.72□□□□□ -1.01
UBE2D3-204ENST00000349311 MPHOSPH8Q99549 860 aa8.72□□□□□ -1.01
UBE2D3-204ENST00000349311 THUMPD2Q9BTF0 503 aaKnown RBP8.72□□□□□ -1.01
UBE2D3-204ENST00000349311 CXorf56Q9H5V9 222 aa8.72□□□□□ -1.01
UBE2D3-204ENST00000349311 MED4Q9NPJ6 270 aa8.72□□□□□ -1.01
UBE2D3-204ENST00000349311 SNTG2Q9NY99 539 aa8.72□□□□□ -1.01
UBE2D3-204ENST00000349311 ADAM21Q9UKJ8 722 aa8.72□□□□□ -1.01
UBE2D3-204ENST00000349311 ACSL6Q9UKU0 697 aa8.72□□□□□ -1.01
UBE2D3-204ENST00000349311 TOGARAM1Q9Y4F4 1720 aa8.71□□□□□ -1.01
UBE2D3-204ENST00000349311 KAT6BQ8WYB5 2073 aa8.71□□□□□ -1.01
UBE2D3-204ENST00000349311 EIF3CLB5ME19 914 aaKnown RBP8.71□□□□□ -1.02
UBE2D3-204ENST00000349311 ZSCAN12O43309 604 aa8.71□□□□□ -1.02
UBE2D3-204ENST00000349311 ADCY3O60266 1144 aa8.71□□□□□ -1.02
UBE2D3-204ENST00000349311 ERLIN1O75477 346 aa8.71□□□□□ -1.02
UBE2D3-204ENST00000349311 GNAI2P04899 355 aa8.71□□□□□ -1.02
UBE2D3-204ENST00000349311 HOXB7P09629 217 aa8.71□□□□□ -1.02
UBE2D3-204ENST00000349311 SFPQP23246 707 aaKnown RBP eCLIP8.71□□□□□ -1.023e-6■□□□□ 10.5
UBE2D3-204ENST00000349311 GRIA2P42262 883 aa8.71□□□□□ -1.02
UBE2D3-204ENST00000349311 GYS2P54840 703 aa8.71□□□□□ -1.02
UBE2D3-204ENST00000349311 GFRA1P56159 465 aa8.71□□□□□ -1.02
UBE2D3-204ENST00000349311 RTP1P59025 263 aa8.71□□□□□ -1.02
UBE2D3-204ENST00000349311 SCRN1Q12765 414 aa8.71□□□□□ -1.02
UBE2D3-204ENST00000349311 DCTN1Q14203 1278 aa8.71□□□□□ -1.02
UBE2D3-204ENST00000349311 HLA-DQA1Q5Y7H0 255 aa8.71□□□□□ -1.02
UBE2D3-204ENST00000349311 ZNF530Q6P9A1 599 aaPredicted RBP8.71□□□□□ -1.02
UBE2D3-204ENST00000349311 SPATC1Q76KD6 591 aa8.71□□□□□ -1.02
UBE2D3-204ENST00000349311 MCM10Q7L590 875 aa8.71□□□□□ -1.02
UBE2D3-204ENST00000349311 ERC1Q8IUD2 1116 aa8.71□□□□□ -1.02
UBE2D3-204ENST00000349311 CCDC83Q8IWF9 413 aa8.71□□□□□ -1.02
UBE2D3-204ENST00000349311 ANKRD20A12PQ8NF67 263 aa8.71□□□□□ -1.02
UBE2D3-204ENST00000349311 LEO1Q8WVC0 666 aaPredicted RBP8.71□□□□□ -1.02
UBE2D3-204ENST00000349311 RUFY2Q8WXA3 655 aa8.71□□□□□ -1.02
UBE2D3-204ENST00000349311 RAPGEF4Q8WZA2 1011 aa8.71□□□□□ -1.02
UBE2D3-204ENST00000349311 FAM168AQ92567 244 aa8.71□□□□□ -1.02
UBE2D3-204ENST00000349311 MMP19Q99542 508 aa8.71□□□□□ -1.02
UBE2D3-204ENST00000349311 EIF3CQ99613 913 aaKnown RBP8.71□□□□□ -1.02
UBE2D3-204ENST00000349311 PLCD4Q9BRC7 762 aa8.71□□□□□ -1.02
UBE2D3-204ENST00000349311 UTP14AQ9BVJ6 771 aaKnown RBP8.71□□□□□ -1.02
UBE2D3-204ENST00000349311 OSBPL2Q9H1P3 480 aa8.71□□□□□ -1.02
UBE2D3-204ENST00000349311 ARHGEF4Q9NR80 690 aa8.71□□□□□ -1.02
UBE2D3-204ENST00000349311 PDRG1Q9NUG6 133 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms