RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 GBA2Q9HCG7 927 aaPredicted RBP16.44■□□□□ 0.22
TPM3-208ENST00000341485 TYW1Q9NV66 732 aaKnown RBP16.44■□□□□ 0.22
TPM3-208ENST00000341485 BTBD7Q9P203 1132 aa16.44■□□□□ 0.22
TPM3-208ENST00000341485 ARMCX3Q9UH62 379 aaPredicted RBP16.44■□□□□ 0.22
TPM3-208ENST00000341485 HYOU1Q9Y4L1 999 aa16.44■□□□□ 0.22
TPM3-208ENST00000341485 A0A0G2JMZ2 1700 aa16.43■□□□□ 0.22
TPM3-208ENST00000341485 EIF3JO75822 258 aaKnown RBP16.43■□□□□ 0.22
TPM3-208ENST00000341485 AKAP3O75969 853 aa16.43■□□□□ 0.22
TPM3-208ENST00000341485 SLITRK3O94933 977 aa16.43■□□□□ 0.22
TPM3-208ENST00000341485 BCRP11274 1271 aa16.43■□□□□ 0.22
TPM3-208ENST00000341485 MCM3P25205 808 aa16.43■□□□□ 0.22
TPM3-208ENST00000341485 FKBP1BP68106 108 aa16.43■□□□□ 0.22
TPM3-208ENST00000341485 ASIC2Q16515 512 aa16.43■□□□□ 0.22
TPM3-208ENST00000341485 KLHDC7AQ5VTJ3 777 aa16.43■□□□□ 0.22
TPM3-208ENST00000341485 IQCEQ6IPM2 695 aa16.43■□□□□ 0.22
TPM3-208ENST00000341485 RNF10Q8N5U6 811 aaKnown RBP16.43■□□□□ 0.22
TPM3-208ENST00000341485 C2orf69Q8N8R5 385 aa16.43■□□□□ 0.22
TPM3-208ENST00000341485 FAM133AQ8N9E0 248 aa16.43■□□□□ 0.22
TPM3-208ENST00000341485 ZBTB9Q96C00 473 aa16.43■□□□□ 0.22
TPM3-208ENST00000341485 NOX5Q96PH1 765 aa16.43■□□□□ 0.22
TPM3-208ENST00000341485 WDR11Q9BZH6 1224 aa16.43■□□□□ 0.22
TPM3-208ENST00000341485 TUFT1Q9NNX1 390 aa16.43■□□□□ 0.22
TPM3-208ENST00000341485 A1CFQ9NQ94 594 aaKnown RBP16.43■□□□□ 0.22
TPM3-208ENST00000341485 CYP39A1Q9NYL5 469 aa16.43■□□□□ 0.22
TPM3-208ENST00000341485 UBIAD1Q9Y5Z9 338 aa16.43■□□□□ 0.22
TPM3-208ENST00000341485 IPO5O00410 1097 aaKnown RBP16.42■□□□□ 0.22
TPM3-208ENST00000341485 N4BP1O75113 896 aaKnown RBP16.42■□□□□ 0.22
TPM3-208ENST00000341485 ZMYND10O75800 440 aa16.42■□□□□ 0.22
TPM3-208ENST00000341485 GCNT3O95395 438 aa16.42■□□□□ 0.22
TPM3-208ENST00000341485 AFPP02771 609 aaKnown RBP16.42■□□□□ 0.22
TPM3-208ENST00000341485 NR3C1P04150 777 aa16.42■□□□□ 0.22
TPM3-208ENST00000341485 TCP1P17987 556 aaKnown RBP16.42■□□□□ 0.22
TPM3-208ENST00000341485 SLC9A1P19634 815 aa16.42■□□□□ 0.22
TPM3-208ENST00000341485 CCND2P30279 289 aa16.42■□□□□ 0.22
TPM3-208ENST00000341485 GJA5P36382 358 aa16.42■□□□□ 0.22
TPM3-208ENST00000341485 GYS2P54840 703 aa16.42■□□□□ 0.22
TPM3-208ENST00000341485 MRPS9P82933 396 aaKnown RBP16.42■□□□□ 0.22
TPM3-208ENST00000341485 ARID5AQ03989 594 aa16.42■□□□□ 0.22
TPM3-208ENST00000341485 KCNA1Q09470 495 aa16.42■□□□□ 0.22
TPM3-208ENST00000341485 KLHL30Q0D2K2 578 aa16.42■□□□□ 0.22
TPM3-208ENST00000341485 PPP2R5CQ13362 524 aa16.42■□□□□ 0.22
TPM3-208ENST00000341485 MTMR1Q13613 665 aa16.42■□□□□ 0.22
TPM3-208ENST00000341485 RIOX2Q8IUF8 465 aa16.42■□□□□ 0.22
TPM3-208ENST00000341485 MMGT1Q8N4V1 131 aa16.42■□□□□ 0.22
TPM3-208ENST00000341485 KCTD17Q8N5Z5 321 aa16.42■□□□□ 0.22
TPM3-208ENST00000341485 ZNF526Q8TF50 670 aaPredicted RBP16.42■□□□□ 0.22
TPM3-208ENST00000341485 TLR10Q9BXR5 811 aa16.42■□□□□ 0.22
TPM3-208ENST00000341485 MAF1Q9H063 256 aa16.42■□□□□ 0.22
TPM3-208ENST00000341485 PLCB1Q9NQ66 1216 aa16.42■□□□□ 0.22
TPM3-208ENST00000341485 KCNH7Q9NS40 1196 aa16.42■□□□□ 0.22
TPM3-208ENST00000341485 PKD2L1Q9P0L9 805 aa16.42■□□□□ 0.22
TPM3-208ENST00000341485 FBXO40Q9UH90 709 aa16.42■□□□□ 0.22
TPM3-208ENST00000341485 A0A087X0T9 212 aa16.42■□□□□ 0.22
TPM3-208ENST00000341485 SFI1A8K8P3 1242 aa16.42■□□□□ 0.22
TPM3-208ENST00000341485 PEX10O60683 326 aa16.42■□□□□ 0.22
TPM3-208ENST00000341485 CELF2O95319 508 aaKnown RBP16.42■□□□□ 0.22
TPM3-208ENST00000341485 FAM228BP0C875 321 aa16.42■□□□□ 0.22
TPM3-208ENST00000341485 GAP43P17677 238 aa16.42■□□□□ 0.22
TPM3-208ENST00000341485 CASP4P49662 377 aa16.42■□□□□ 0.22
TPM3-208ENST00000341485 ITIH3Q06033 890 aa16.42■□□□□ 0.22
TPM3-208ENST00000341485 GPS2Q13227 327 aa16.42■□□□□ 0.22
TPM3-208ENST00000341485 SLC18A3Q16572 532 aa16.42■□□□□ 0.22
TPM3-208ENST00000341485 C1orf186Q6ZWK4 172 aa16.42■□□□□ 0.22
TPM3-208ENST00000341485 NCAPG2Q86XI2 1143 aa16.42■□□□□ 0.22
TPM3-208ENST00000341485 TPH2Q8IWU9 490 aa16.42■□□□□ 0.22
TPM3-208ENST00000341485 ANKRD35Q8N283 1001 aa16.42■□□□□ 0.22
TPM3-208ENST00000341485 NSUN6Q8TEA1 469 aaKnown RBP16.42■□□□□ 0.22
TPM3-208ENST00000341485 PSMB7Q99436 277 aa16.42■□□□□ 0.22
TPM3-208ENST00000341485 SPATC1LQ9H0A9 340 aa16.42■□□□□ 0.22
TPM3-208ENST00000341485 OLFML3Q9NRN5 406 aa16.42■□□□□ 0.22
TPM3-208ENST00000341485 SMARCAL1Q9NZC9 954 aa16.42■□□□□ 0.22
TPM3-208ENST00000341485 TESPA1A2RU30 521 aaPredicted RBP16.41■□□□□ 0.22
TPM3-208ENST00000341485 DDX39AO00148 427 aaKnown RBP16.41■□□□□ 0.22
TPM3-208ENST00000341485 ZBTB39O15060 712 aa16.41■□□□□ 0.22
TPM3-208ENST00000341485 CLIC2O15247 247 aa16.41■□□□□ 0.22
TPM3-208ENST00000341485 SLC16A3O15427 465 aaKnown RBP16.41■□□□□ 0.22
TPM3-208ENST00000341485 CXCR5P32302 372 aa16.41■□□□□ 0.22
TPM3-208ENST00000341485 MOGSQ13724 837 aa16.41■□□□□ 0.22
TPM3-208ENST00000341485 ENOX2Q16206 610 aaKnown RBP16.41■□□□□ 0.22
TPM3-208ENST00000341485 XRRA1Q6P2D8 792 aa16.41■□□□□ 0.22
TPM3-208ENST00000341485 RIT2Q99578 217 aa16.41■□□□□ 0.22
TPM3-208ENST00000341485 NMRK2Q9NPI5 230 aa16.41■□□□□ 0.22
TPM3-208ENST00000341485 EHD2Q9NZN4 543 aa16.41■□□□□ 0.22
TPM3-208ENST00000341485 ZMYM2Q9UBW7 1377 aa16.41■□□□□ 0.22
TPM3-208ENST00000341485 ERICH4A6NGS2 130 aa16.41■□□□□ 0.22
TPM3-208ENST00000341485 TGFB1I1O43294 461 aa16.41■□□□□ 0.22
TPM3-208ENST00000341485 FAM13AO94988 1023 aa16.41■□□□□ 0.22
TPM3-208ENST00000341485 NR3C2P08235 984 aa16.41■□□□□ 0.22
TPM3-208ENST00000341485 MYBL2P10244 700 aa16.41■□□□□ 0.22
TPM3-208ENST00000341485 XRCC5P13010 732 aaKnown RBP16.41■□□□□ 0.22
TPM3-208ENST00000341485 PON1P27169 355 aa16.41■□□□□ 0.22
TPM3-208ENST00000341485 EPHA7Q15375 998 aa16.41■□□□□ 0.22
TPM3-208ENST00000341485 NAB2Q15742 525 aa16.41■□□□□ 0.22
TPM3-208ENST00000341485 MAP9Q49MG5 647 aa16.41■□□□□ 0.22
TPM3-208ENST00000341485 DCAF17Q5H9S7 520 aaPredicted RBP16.41■□□□□ 0.22
TPM3-208ENST00000341485 SPATA4Q8NEY3 305 aa16.41■□□□□ 0.22
TPM3-208ENST00000341485 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.41■□□□□ 0.22
TPM3-208ENST00000341485 UNC45AQ9H3U1 944 aa16.41■□□□□ 0.22
TPM3-208ENST00000341485 AGO4Q9HCK5 861 aaKnown RBP16.41■□□□□ 0.22
TPM3-208ENST00000341485 SOCS7O14512 581 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms