RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 MGAT3Q09327 533 aa14.69□□□□□ -0.06
TUBD1-202ENST00000340993 NFX1Q12986 1120 aaKnown RBP14.69□□□□□ -0.06
TUBD1-202ENST00000340993 TMEM119Q4V9L6 283 aa14.69□□□□□ -0.06
TUBD1-202ENST00000340993 IER5Q5VY09 327 aa14.69□□□□□ -0.06
TUBD1-202ENST00000340993 SHC4Q6S5L8 630 aa14.69□□□□□ -0.06
TUBD1-202ENST00000340993 ASAP3Q8TDY4 903 aa14.69□□□□□ -0.06
TUBD1-202ENST00000340993 PRPF31Q8WWY3 499 aaKnown RBP14.69□□□□□ -0.06
TUBD1-202ENST00000340993 STAMQ92783 540 aa14.69□□□□□ -0.06
TUBD1-202ENST00000340993 VWCEQ96DN2 955 aa14.69□□□□□ -0.06
TUBD1-202ENST00000340993 GDF15Q99988 308 aa14.69□□□□□ -0.06
TUBD1-202ENST00000340993 CELF4Q9BZC1 486 aaKnown RBP14.69□□□□□ -0.06
TUBD1-202ENST00000340993 DHX33Q9H6R0 707 aaKnown RBP14.69□□□□□ -0.06
TUBD1-202ENST00000340993 IL23AQ9NPF7 189 aa14.69□□□□□ -0.06
TUBD1-202ENST00000340993 A0A087WZ62 844 aa14.68□□□□□ -0.06
TUBD1-202ENST00000340993 CUTAO60888 179 aa14.68□□□□□ -0.06
TUBD1-202ENST00000340993 PPP6R2O75170 966 aa14.68□□□□□ -0.06
TUBD1-202ENST00000340993 EYA4O95677 639 aa14.68□□□□□ -0.06
TUBD1-202ENST00000340993 DNM2P50570 870 aa14.68□□□□□ -0.06
TUBD1-202ENST00000340993 LPIN1Q14693 890 aa14.68□□□□□ -0.06
TUBD1-202ENST00000340993 AXDND1Q5T1B0 1012 aaPredicted RBP14.68□□□□□ -0.06
TUBD1-202ENST00000340993 LINC01465Q8N7H1 131 aa14.68□□□□□ -0.06
TUBD1-202ENST00000340993 DHX58Q96C10 678 aa14.68□□□□□ -0.06
TUBD1-202ENST00000340993 RNPC3Q96LT9 517 aaKnown RBP14.68□□□□□ -0.06
TUBD1-202ENST00000340993 FDXACB1Q9BRP7 624 aaPredicted RBP14.68□□□□□ -0.06
TUBD1-202ENST00000340993 KIFC3Q9BVG8 833 aa14.68□□□□□ -0.06
TUBD1-202ENST00000340993 AGO3Q9H9G7 860 aaKnown RBP14.68□□□□□ -0.06
TUBD1-202ENST00000340993 CHMP5Q9NZZ3 219 aa14.68□□□□□ -0.06
TUBD1-202ENST00000340993 CXXC1Q9P0U4 656 aaPredicted RBP14.68□□□□□ -0.06
TUBD1-202ENST00000340993 COL4A3BPQ9Y5P4 624 aa14.68□□□□□ -0.06
TUBD1-202ENST00000340993 MICAL3Q7RTP6 2002 aa14.68□□□□□ -0.06
TUBD1-202ENST00000340993 SFI1A8K8P3 1242 aa14.68□□□□□ -0.06
TUBD1-202ENST00000340993 GPR32O75388 356 aa14.68□□□□□ -0.06
TUBD1-202ENST00000340993 DGAT1O75907 488 aa14.68□□□□□ -0.06
TUBD1-202ENST00000340993 RFC5P40937 340 aa14.68□□□□□ -0.06
TUBD1-202ENST00000340993 STAT6P42226 847 aa14.68□□□□□ -0.06
TUBD1-202ENST00000340993 GPC3P51654 580 aa14.68□□□□□ -0.06
TUBD1-202ENST00000340993 LAMTOR4Q0VGL1 99 aa14.68□□□□□ -0.06
TUBD1-202ENST00000340993 TMEM240Q5SV17 173 aa14.68□□□□□ -0.06
TUBD1-202ENST00000340993 RRAGBQ5VZM2 374 aa14.68□□□□□ -0.06
TUBD1-202ENST00000340993 FAM117BQ6P1L5 589 aa14.68□□□□□ -0.06
TUBD1-202ENST00000340993 GPBP1Q86WP2 473 aa14.68□□□□□ -0.06
TUBD1-202ENST00000340993 DBF4BQ8NFT6 615 aa14.68□□□□□ -0.06
TUBD1-202ENST00000340993 PSPC1Q8WXF1 523 aaKnown RBP14.68□□□□□ -0.06
TUBD1-202ENST00000340993 IFIH1Q9BYX4 1025 aaKnown RBP14.68□□□□□ -0.06
TUBD1-202ENST00000340993 NT5C3AQ9H0P0 336 aa14.68□□□□□ -0.06
TUBD1-202ENST00000340993 ZHX3Q9H4I2 956 aa14.68□□□□□ -0.06
TUBD1-202ENST00000340993 DBR1Q9UK59 544 aaKnown RBP14.68□□□□□ -0.06
TUBD1-202ENST00000340993 RCOR1Q9UKL0 485 aa14.68□□□□□ -0.06
TUBD1-202ENST00000340993 NOC2LQ9Y3T9 749 aaKnown RBP14.68□□□□□ -0.06
TUBD1-202ENST00000340993 STK24Q9Y6E0 443 aa14.68□□□□□ -0.06
TUBD1-202ENST00000340993 IGKV6-21A0A0C4DH24 114 aa14.67□□□□□ -0.06
TUBD1-202ENST00000340993 A0A1B0GVL5 298 aa14.67□□□□□ -0.06
TUBD1-202ENST00000340993 RBL2Q08999 1139 aa14.67□□□□□ -0.06
TUBD1-202ENST00000340993 FBXO47Q5MNV8 452 aa14.67□□□□□ -0.06
TUBD1-202ENST00000340993 RNF149Q8NC42 400 aa14.67□□□□□ -0.06
TUBD1-202ENST00000340993 BLOC1S4Q9NUP1 217 aa14.67□□□□□ -0.06
TUBD1-202ENST00000340993 CCDC39Q9UFE4 941 aa14.67□□□□□ -0.06
TUBD1-202ENST00000340993 GBF1Q92538 1859 aa14.66□□□□□ -0.06
TUBD1-202ENST00000340993 PTPRSQ13332 1948 aa14.66□□□□□ -0.06
TUBD1-202ENST00000340993 LRRIQ4A6NIV6 560 aa14.66□□□□□ -0.06
TUBD1-202ENST00000340993 HIP1RO75146 1068 aa14.66□□□□□ -0.06
TUBD1-202ENST00000340993 FGBP02675 491 aa14.66□□□□□ -0.06
TUBD1-202ENST00000340993 KRT18P05783 430 aaKnown RBP14.66□□□□□ -0.06
TUBD1-202ENST00000340993 PAK2Q13177 524 aa14.66□□□□□ -0.06
TUBD1-202ENST00000340993 HYIQ5T013 277 aa14.66□□□□□ -0.06
TUBD1-202ENST00000340993 ATL3Q6DD88 541 aa14.66□□□□□ -0.06
TUBD1-202ENST00000340993 RINT1Q6NUQ1 792 aa14.66□□□□□ -0.06
TUBD1-202ENST00000340993 DYMQ7RTS9 669 aa14.66□□□□□ -0.06
TUBD1-202ENST00000340993 RPUSD2Q8IZ73 545 aaKnown RBP14.66□□□□□ -0.06
TUBD1-202ENST00000340993 BSNDQ8WZ55 320 aa14.66□□□□□ -0.06
TUBD1-202ENST00000340993 RAD54LQ92698 747 aa14.66□□□□□ -0.06
TUBD1-202ENST00000340993 CCSER1Q9C0I3 900 aa14.66□□□□□ -0.06
TUBD1-202ENST00000340993 ADAMTS10Q9H324 1103 aa14.66□□□□□ -0.06
TUBD1-202ENST00000340993 CIZ1Q9ULV3 898 aaPredicted RBP14.66□□□□□ -0.06
TUBD1-202ENST00000340993 USP20Q9Y2K6 914 aa14.66□□□□□ -0.06
TUBD1-202ENST00000340993 GRXCR1A8MXD5 290 aa14.65□□□□□ -0.06
TUBD1-202ENST00000340993 POLR2DO15514 142 aaKnown RBP14.65□□□□□ -0.06
TUBD1-202ENST00000340993 RPS6KA5O75582 802 aa14.65□□□□□ -0.06
TUBD1-202ENST00000340993 GLRA2P23416 452 aa14.65□□□□□ -0.06
TUBD1-202ENST00000340993 SLC12A3P55017 1021 aa14.65□□□□□ -0.06
TUBD1-202ENST00000340993 CAPSQ13938 189 aa14.65□□□□□ -0.06
TUBD1-202ENST00000340993 FAM109BQ6ICB4 259 aaPredicted RBP14.65□□□□□ -0.06
TUBD1-202ENST00000340993 NME8Q8N427 588 aa14.65□□□□□ -0.06
TUBD1-202ENST00000340993 LARP4BQ92615 738 aaKnown RBP14.65□□□□□ -0.06
TUBD1-202ENST00000340993 JPH2Q9BR39 696 aaPredicted RBP14.65□□□□□ -0.06
TUBD1-202ENST00000340993 PADI3Q9ULW8 664 aa14.65□□□□□ -0.06
TUBD1-202ENST00000340993 UPP2O95045 317 aa14.65□□□□□ -0.06
TUBD1-202ENST00000340993 CYP11B2P19099 503 aa14.65□□□□□ -0.06
TUBD1-202ENST00000340993 CASP1P29466 404 aa14.65□□□□□ -0.06
TUBD1-202ENST00000340993 LONRF3Q496Y0 759 aa14.65□□□□□ -0.06
TUBD1-202ENST00000340993 FAM26DQ5JW98 314 aa14.65□□□□□ -0.06
TUBD1-202ENST00000340993 PSRC1Q6PGN9 363 aaPredicted RBP14.65□□□□□ -0.06
TUBD1-202ENST00000340993 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.65□□□□□ -0.06
TUBD1-202ENST00000340993 TSHZ1Q6ZSZ6 1077 aa14.65□□□□□ -0.06
TUBD1-202ENST00000340993 FAM228AQ86W67 206 aa14.65□□□□□ -0.06
TUBD1-202ENST00000340993 GRAMD1CQ8IYS0 662 aa14.65□□□□□ -0.06
TUBD1-202ENST00000340993 FSIP1Q8NA03 581 aa14.65□□□□□ -0.06
TUBD1-202ENST00000340993 TCP11Q8WWU5 503 aa14.65□□□□□ -0.06
TUBD1-202ENST00000340993 SCAND2PQ9GZW5 306 aaPredicted RBP14.65□□□□□ -0.06
TUBD1-202ENST00000340993 MINDY3Q9H8M7 445 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms