RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 TFR2Q9UP52 801 aa24.59■■□□□ 1.53
PDLIM2-203ENST00000339162 DKC1O60832 514 aaKnown RBP eCLIP24.58■■□□□ 1.53
PDLIM2-203ENST00000339162 ACTN1P12814 892 aa24.58■■□□□ 1.53
PDLIM2-203ENST00000339162 POLR2FP61218 127 aaKnown RBP24.58■■□□□ 1.53
PDLIM2-203ENST00000339162 BORCS6Q96GS4 357 aa24.58■■□□□ 1.53
PDLIM2-203ENST00000339162 TIPINQ9BVW5 301 aa24.58■■□□□ 1.53
PDLIM2-203ENST00000339162 PLAGL2Q9UPG8 496 aa24.58■■□□□ 1.53
PDLIM2-203ENST00000339162 IGSF9BQ9UPX0 1349 aa24.58■■□□□ 1.53
PDLIM2-203ENST00000339162 DNAJC25-GNG10A0A024R161 153 aa24.58■■□□□ 1.52
PDLIM2-203ENST00000339162 ATG7O95352 703 aa24.58■■□□□ 1.52
PDLIM2-203ENST00000339162 GGPS1O95749 300 aa24.58■■□□□ 1.52
PDLIM2-203ENST00000339162 SLC9A1P19634 815 aa24.58■■□□□ 1.52
PDLIM2-203ENST00000339162 NPTX2P47972 431 aa24.58■■□□□ 1.52
PDLIM2-203ENST00000339162 BRI3BPQ8WY22 251 aa24.58■■□□□ 1.52
PDLIM2-203ENST00000339162 IQCDQ96DY2 449 aa24.58■■□□□ 1.52
PDLIM2-203ENST00000339162 MROH8Q9H579 483 aa24.58■■□□□ 1.52
PDLIM2-203ENST00000339162 XPNPEP1Q9NQW7 623 aa24.58■■□□□ 1.52
PDLIM2-203ENST00000339162 DMAC2Q9NW81 257 aa24.58■■□□□ 1.52
PDLIM2-203ENST00000339162 PNMA3Q9UL41 463 aa24.58■■□□□ 1.52
PDLIM2-203ENST00000339162 GSTTP1A0A1W2PQM5 241 aa24.57■■□□□ 1.52
PDLIM2-203ENST00000339162 MAPTP10636 758 aaKnown RBP24.57■■□□□ 1.52
PDLIM2-203ENST00000339162 CETPP11597 493 aa24.57■■□□□ 1.52
PDLIM2-203ENST00000339162 NFIL3Q16649 462 aa24.57■■□□□ 1.52
PDLIM2-203ENST00000339162 FBXO16Q8IX29 292 aaPredicted RBP24.57■■□□□ 1.52
PDLIM2-203ENST00000339162 ACCSQ96QU6 501 aa24.57■■□□□ 1.52
PDLIM2-203ENST00000339162 MAFBQ9Y5Q3 323 aaPredicted RBP24.57■■□□□ 1.52
PDLIM2-203ENST00000339162 EXOC3O60645 756 aa24.57■■□□□ 1.52
PDLIM2-203ENST00000339162 NCKAP1LP55160 1127 aa24.57■■□□□ 1.52
PDLIM2-203ENST00000339162 GTF2BQ00403 316 aa24.57■■□□□ 1.52
PDLIM2-203ENST00000339162 XKR3Q5GH77 459 aa24.57■■□□□ 1.52
PDLIM2-203ENST00000339162 TMEM63BQ5T3F8 832 aa24.57■■□□□ 1.52
PDLIM2-203ENST00000339162 CBWD1Q9BRT8 395 aa24.57■■□□□ 1.52
PDLIM2-203ENST00000339162 TMEM206Q9H813 350 aa24.57■■□□□ 1.52
PDLIM2-203ENST00000339162 FRMD4BQ9Y2L6 1034 aa24.57■■□□□ 1.52
PDLIM2-203ENST00000339162 DMP1Q13316 513 aaPredicted RBP24.56■■□□□ 1.52
PDLIM2-203ENST00000339162 ZSWIM2Q8NEG5 633 aa24.56■■□□□ 1.52
PDLIM2-203ENST00000339162 PCYT2Q99447 389 aa24.56■■□□□ 1.52
PDLIM2-203ENST00000339162 ARHGAP20Q9P2F6 1191 aa24.56■■□□□ 1.52
PDLIM2-203ENST00000339162 DGAT1O75907 488 aa24.55■■□□□ 1.52
PDLIM2-203ENST00000339162 COPB2P35606 906 aa24.55■■□□□ 1.52
PDLIM2-203ENST00000339162 GTF2A2P52657 109 aa24.55■■□□□ 1.52
PDLIM2-203ENST00000339162 ARHGAP29Q52LW3 1261 aa24.55■■□□□ 1.52
PDLIM2-203ENST00000339162 TMEM161BQ8NDZ6 487 aa24.55■■□□□ 1.52
PDLIM2-203ENST00000339162 GPRC5AQ8NFJ5 357 aa24.55■■□□□ 1.52
PDLIM2-203ENST00000339162 MLXIPQ9HAP2 919 aa24.55■■□□□ 1.52
PDLIM2-203ENST00000339162 PDLIM7Q9NR12 457 aa24.55■■□□□ 1.52
PDLIM2-203ENST00000339162 TRIM10Q9UDY6 481 aa24.55■■□□□ 1.52
PDLIM2-203ENST00000339162 NEDD9Q14511 834 aa24.55■■□□□ 1.52
PDLIM2-203ENST00000339162 PDXDC1Q6P996 788 aa24.55■■□□□ 1.52
PDLIM2-203ENST00000339162 C2orf69Q8N8R5 385 aa24.55■■□□□ 1.52
PDLIM2-203ENST00000339162 GOLGA5Q8TBA6 731 aa24.55■■□□□ 1.52
PDLIM2-203ENST00000339162 KMT5AQ9NQR1 393 aa24.55■■□□□ 1.52
PDLIM2-203ENST00000339162 CEP72Q9P209 647 aa24.55■■□□□ 1.52
PDLIM2-203ENST00000339162 PHLPP2Q6ZVD8 1323 aa24.54■■□□□ 1.52
PDLIM2-203ENST00000339162 OATP04181 439 aa24.54■■□□□ 1.52
PDLIM2-203ENST00000339162 TRIM49P0CI25 452 aa24.54■■□□□ 1.52
PDLIM2-203ENST00000339162 TRIM49CP0CI26 452 aa24.54■■□□□ 1.52
PDLIM2-203ENST00000339162 HNRNPH3P31942 346 aaKnown RBP24.54■■□□□ 1.52
PDLIM2-203ENST00000339162 SMTNP53814 917 aa24.54■■□□□ 1.52
PDLIM2-203ENST00000339162 CYP27A1Q02318 531 aa24.54■■□□□ 1.52
PDLIM2-203ENST00000339162 ALCAMQ13740 583 aa24.54■■□□□ 1.52
PDLIM2-203ENST00000339162 EXOC3L4Q17RC7 722 aa24.54■■□□□ 1.52
PDLIM2-203ENST00000339162 KIFAP3Q92845 792 aa24.54■■□□□ 1.52
PDLIM2-203ENST00000339162 ATP6V0A4Q9HBG4 840 aa24.54■■□□□ 1.52
PDLIM2-203ENST00000339162 DDX41Q9UJV9 622 aaKnown RBP24.54■■□□□ 1.52
PDLIM2-203ENST00000339162 MYH9P35579 1960 aaKnown RBP24.54■■□□□ 1.52
PDLIM2-203ENST00000339162 ADGRA3Q8IWK6 1321 aa24.54■■□□□ 1.52
PDLIM2-203ENST00000339162 DENND3A2RUS2 1198 aa24.54■■□□□ 1.52
PDLIM2-203ENST00000339162 TULP1O00294 542 aaPredicted RBP24.54■■□□□ 1.52
PDLIM2-203ENST00000339162 TUBB4AP04350 444 aa24.54■■□□□ 1.52
PDLIM2-203ENST00000339162 TCF7P36402 384 aaPredicted RBP24.54■■□□□ 1.52
PDLIM2-203ENST00000339162 ARHGAP25P42331 645 aa24.54■■□□□ 1.52
PDLIM2-203ENST00000339162 PPP2R3AQ06190 1150 aa24.54■■□□□ 1.52
PDLIM2-203ENST00000339162 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.54■■□□□ 1.525e-6■■■□□ 17.2
PDLIM2-203ENST00000339162 MKNK1Q9BUB5 465 aa24.54■■□□□ 1.52
PDLIM2-203ENST00000339162 ST6GALNAC4Q9H4F1 302 aa24.54■■□□□ 1.52
PDLIM2-203ENST00000339162 TGFB3P10600 412 aa24.53■■□□□ 1.52
PDLIM2-203ENST00000339162 PON1P27169 355 aa24.53■■□□□ 1.52
PDLIM2-203ENST00000339162 GTF2F1P35269 517 aaKnown RBP eCLIP24.53■■□□□ 1.52
PDLIM2-203ENST00000339162 POLGP54098 1239 aaPredicted RBP24.53■■□□□ 1.52
PDLIM2-203ENST00000339162 HSDL1Q3SXM5 330 aa24.53■■□□□ 1.52
PDLIM2-203ENST00000339162 METTL7BQ6UX53 244 aa24.53■■□□□ 1.52
PDLIM2-203ENST00000339162 TMEM143Q96AN5 459 aa24.53■■□□□ 1.52
PDLIM2-203ENST00000339162 CCDC42Q96M95 316 aa24.53■■□□□ 1.52
PDLIM2-203ENST00000339162 MPHOSPH6Q99547 160 aaKnown RBP24.53■■□□□ 1.52
PDLIM2-203ENST00000339162 GANQ9H2C0 597 aa24.53■■□□□ 1.52
PDLIM2-203ENST00000339162 NMRK2Q9NPI5 230 aa24.53■■□□□ 1.52
PDLIM2-203ENST00000339162 PDGFCQ9NRA1 345 aa24.53■■□□□ 1.52
PDLIM2-203ENST00000339162 TBX20Q9UMR3 447 aa24.53■■□□□ 1.52
PDLIM2-203ENST00000339162 MCM3APO60318 1980 aa24.53■■□□□ 1.52
PDLIM2-203ENST00000339162 IGKV6D-21A0A0A0MT36 114 aa24.53■■□□□ 1.52
PDLIM2-203ENST00000339162 UNCXA6NJT0 531 aa24.53■■□□□ 1.52
PDLIM2-203ENST00000339162 CYLC1P35663 651 aaPredicted RBP24.53■■□□□ 1.52
PDLIM2-203ENST00000339162 DPY19L2P1Q6NXN4 242 aa24.53■■□□□ 1.52
PDLIM2-203ENST00000339162 SLC9A9Q8IVB4 645 aa24.53■■□□□ 1.52
PDLIM2-203ENST00000339162 MCPH1Q8NEM0 835 aa24.53■■□□□ 1.52
PDLIM2-203ENST00000339162 COPS5Q92905 334 aa24.53■■□□□ 1.52
PDLIM2-203ENST00000339162 POLR3FQ9H1D9 316 aaPredicted RBP24.53■■□□□ 1.52
PDLIM2-203ENST00000339162 ANKRD63C9JTQ0 380 aa24.52■■□□□ 1.52
PDLIM2-203ENST00000339162 CASQ1P31415 396 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms