RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 TMED1Q13445 227 aa10.97□□□□□ -0.65
CLDN1-201ENST00000295522 SNX30Q5VWJ9 437 aa10.97□□□□□ -0.65
CLDN1-201ENST00000295522 OPTNQ96CV9 577 aa10.97□□□□□ -0.65
CLDN1-201ENST00000295522 DDX27Q96GQ7 796 aaKnown RBP10.97□□□□□ -0.65
CLDN1-201ENST00000295522 TBC1D10AQ9BXI6 508 aa10.97□□□□□ -0.65
CLDN1-201ENST00000295522 VCX3BQ9H321 246 aa10.97□□□□□ -0.65
CLDN1-201ENST00000295522 PREBQ9HCU5 417 aa10.97□□□□□ -0.65
CLDN1-201ENST00000295522 VCX3AQ9NNX9 186 aa10.97□□□□□ -0.65
CLDN1-201ENST00000295522 PRDM11Q9NQV5 511 aa10.97□□□□□ -0.65
CLDN1-201ENST00000295522 CNTNAP5Q8WYK1 1306 aa10.97□□□□□ -0.65
CLDN1-201ENST00000295522 FMN2Q9NZ56 1722 aa10.97□□□□□ -0.65
CLDN1-201ENST00000295522 POTEMA6NI47 508 aa10.97□□□□□ -0.65
CLDN1-201ENST00000295522 CAPN9O14815 690 aa10.97□□□□□ -0.65
CLDN1-201ENST00000295522 NPTXRO95502 500 aa10.97□□□□□ -0.65
CLDN1-201ENST00000295522 FKBP3Q00688 224 aaKnown RBP10.97□□□□□ -0.65
CLDN1-201ENST00000295522 AUHQ13825 339 aaKnown RBP10.97□□□□□ -0.65
CLDN1-201ENST00000295522 EXOC3L4Q17RC7 722 aa10.97□□□□□ -0.65
CLDN1-201ENST00000295522 ZC2HC1CQ53FD0 456 aaPredicted RBP10.97□□□□□ -0.65
CLDN1-201ENST00000295522 ECHDC2Q86YB7 292 aa10.97□□□□□ -0.65
CLDN1-201ENST00000295522 SNX29Q8TEQ0 813 aa10.97□□□□□ -0.65
CLDN1-201ENST00000295522 SCG3Q8WXD2 468 aaKnown RBP10.97□□□□□ -0.65
CLDN1-201ENST00000295522 TNFRSF25Q93038 417 aa10.97□□□□□ -0.65
CLDN1-201ENST00000295522 PGM2Q96G03 612 aa10.97□□□□□ -0.65
CLDN1-201ENST00000295522 CTTNBP2NLQ9P2B4 639 aa10.97□□□□□ -0.65
CLDN1-201ENST00000295522 PCDHA4Q9UN74 947 aa10.97□□□□□ -0.65
CLDN1-201ENST00000295522 CHMP2BQ9UQN3 213 aa10.97□□□□□ -0.65
CLDN1-201ENST00000295522 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.97□□□□□ -0.65
CLDN1-201ENST00000295522 GNAT2P19087 354 aa10.97□□□□□ -0.65
CLDN1-201ENST00000295522 SEPT7Q16181 437 aaKnown RBP10.97□□□□□ -0.65
CLDN1-201ENST00000295522 HERC4Q5GLZ8 1057 aaPredicted RBP10.97□□□□□ -0.65
CLDN1-201ENST00000295522 CENPPQ6IPU0 288 aa10.97□□□□□ -0.65
CLDN1-201ENST00000295522 GJB7Q6PEY0 223 aa10.97□□□□□ -0.65
CLDN1-201ENST00000295522 SYCE1Q8N0S2 351 aa10.97□□□□□ -0.65
CLDN1-201ENST00000295522 SPOCK2Q92563 424 aa10.97□□□□□ -0.65
CLDN1-201ENST00000295522 LARP4BQ92615 738 aaKnown RBP10.97□□□□□ -0.65
CLDN1-201ENST00000295522 KCNMB3Q9NPA1 279 aa10.97□□□□□ -0.65
CLDN1-201ENST00000295522 NAGPAQ9UK23 515 aa10.97□□□□□ -0.65
CLDN1-201ENST00000295522 ASAP1Q9ULH1 1129 aa10.97□□□□□ -0.65
CLDN1-201ENST00000295522 HEG1Q9ULI3 1381 aa10.97□□□□□ -0.65
CLDN1-201ENST00000295522 C4AP0C0L4 1744 aa10.96□□□□□ -0.65
CLDN1-201ENST00000295522 C4BP0C0L5 1744 aa10.96□□□□□ -0.65
CLDN1-201ENST00000295522 NWD2Q9ULI1 1742 aa10.96□□□□□ -0.65
CLDN1-201ENST00000295522 RGPD8O14715 1765 aaPredicted RBP10.96□□□□□ -0.65
CLDN1-201ENST00000295522 TCRBV5S4A2TA0A5A2 114 aa10.96□□□□□ -0.65
CLDN1-201ENST00000295522 FAM196BA6NMK8 535 aa10.96□□□□□ -0.65
CLDN1-201ENST00000295522 MYBP10242 640 aa10.96□□□□□ -0.65
CLDN1-201ENST00000295522 GM2AP17900 193 aa10.96□□□□□ -0.65
CLDN1-201ENST00000295522 MCL1Q07820 350 aa10.96□□□□□ -0.65
CLDN1-201ENST00000295522 TMED2Q15363 201 aa10.96□□□□□ -0.65
CLDN1-201ENST00000295522 SEC23AQ15436 765 aa10.96□□□□□ -0.65
CLDN1-201ENST00000295522 LRRC36Q1X8D7 754 aa10.96□□□□□ -0.65
CLDN1-201ENST00000295522 DDX12PQ92771 950 aa10.96□□□□□ -0.65
CLDN1-201ENST00000295522 GJA10Q969M2 543 aa10.96□□□□□ -0.65
CLDN1-201ENST00000295522 BMP2KQ9NSY1 1161 aaPredicted RBP10.96□□□□□ -0.65
CLDN1-201ENST00000295522 TMEM59LQ9UK28 342 aa10.96□□□□□ -0.65
CLDN1-201ENST00000295522 NWD1Q149M9 1564 aa10.96□□□□□ -0.65
CLDN1-201ENST00000295522 THAP12O43422 761 aa10.96□□□□□ -0.66
CLDN1-201ENST00000295522 PPP1R2P41236 205 aa10.96□□□□□ -0.66
CLDN1-201ENST00000295522 PPP2R5BQ15173 497 aa10.96□□□□□ -0.66
CLDN1-201ENST00000295522 ALX1Q15699 326 aa10.96□□□□□ -0.66
CLDN1-201ENST00000295522 PFKFB3Q16875 520 aaPredicted RBP10.96□□□□□ -0.66
CLDN1-201ENST00000295522 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.96□□□□□ -0.66
CLDN1-201ENST00000295522 HP1BP3Q5SSJ5 553 aaPredicted RBP10.96□□□□□ -0.66
CLDN1-201ENST00000295522 CYP4F22Q6NT55 531 aa10.96□□□□□ -0.66
CLDN1-201ENST00000295522 GLYCTKQ8IVS8 523 aa10.96□□□□□ -0.66
CLDN1-201ENST00000295522 RBBP8NLQ8NC74 664 aaPredicted RBP10.96□□□□□ -0.66
CLDN1-201ENST00000295522 DENND2DQ9H6A0 471 aaPredicted RBP10.96□□□□□ -0.66
CLDN1-201ENST00000295522 IRS4O14654 1257 aaPredicted RBP10.96□□□□□ -0.66
CLDN1-201ENST00000295522 HNRNPRO43390 633 aaKnown RBP10.96□□□□□ -0.66
CLDN1-201ENST00000295522 TOM1O60784 492 aa10.96□□□□□ -0.66
CLDN1-201ENST00000295522 KRT36O76013 467 aa10.96□□□□□ -0.66
CLDN1-201ENST00000295522 CLSTN1O94985 981 aa10.96□□□□□ -0.66
CLDN1-201ENST00000295522 MYL1P05976 194 aa10.96□□□□□ -0.66
CLDN1-201ENST00000295522 CCNFP41002 786 aa10.96□□□□□ -0.66
CLDN1-201ENST00000295522 RPL21P46778 160 aaKnown RBP10.96□□□□□ -0.66
CLDN1-201ENST00000295522 CDR2Q01850 454 aa10.96□□□□□ -0.66
CLDN1-201ENST00000295522 KCNH2Q12809 1159 aa10.96□□□□□ -0.66
CLDN1-201ENST00000295522 RBM26Q5T8P6 1007 aaKnown RBP10.96□□□□□ -0.66
CLDN1-201ENST00000295522 LRP10Q7Z4F1 713 aa10.96□□□□□ -0.66
CLDN1-201ENST00000295522 PDCD7Q8N8D1 485 aaKnown RBP10.96□□□□□ -0.66
CLDN1-201ENST00000295522 UTP4Q969X6 686 aaKnown RBP10.96□□□□□ -0.66
CLDN1-201ENST00000295522 CARD9Q9H257 536 aa10.96□□□□□ -0.66
CLDN1-201ENST00000295522 SLCO1B3Q9NPD5 702 aa10.96□□□□□ -0.66
CLDN1-201ENST00000295522 SERPINA10Q9UK55 444 aa10.96□□□□□ -0.66
CLDN1-201ENST00000295522 PPP1R9AQ9ULJ8 1098 aa10.96□□□□□ -0.66
CLDN1-201ENST00000295522 MYO5AQ9Y4I1 1855 aaKnown RBP10.96□□□□□ -0.66
CLDN1-201ENST00000295522 SMAPO00193 183 aa10.95□□□□□ -0.66
CLDN1-201ENST00000295522 TXNDC9O14530 226 aa10.95□□□□□ -0.66
CLDN1-201ENST00000295522 MAP3K7O43318 606 aa10.95□□□□□ -0.66
CLDN1-201ENST00000295522 NOL4O94818 638 aa10.95□□□□□ -0.66
CLDN1-201ENST00000295522 VHLP40337 213 aa10.95□□□□□ -0.66
CLDN1-201ENST00000295522 FUT2Q10981 343 aa10.95□□□□□ -0.66
CLDN1-201ENST00000295522 PUM3Q15397 648 aaKnown RBP10.95□□□□□ -0.66
CLDN1-201ENST00000295522 DIXDC1Q155Q3 683 aa10.95□□□□□ -0.66
CLDN1-201ENST00000295522 KYNUQ16719 465 aa10.95□□□□□ -0.66
CLDN1-201ENST00000295522 COL23A1Q86Y22 540 aaPredicted RBP10.95□□□□□ -0.66
CLDN1-201ENST00000295522 SH3RF3Q8TEJ3 882 aaPredicted RBP10.95□□□□□ -0.66
CLDN1-201ENST00000295522 ATP8B4Q8TF62 1192 aa10.95□□□□□ -0.66
CLDN1-201ENST00000295522 CCSER1Q9C0I3 900 aa10.95□□□□□ -0.66
CLDN1-201ENST00000295522 DNAAF2Q9NVR5 837 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms