RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 BORCS6Q96GS4 357 aa13.71□□□□□ -0.21
RFPL3-201ENST00000249007 UBAC1Q9BSL1 405 aa13.71□□□□□ -0.21
RFPL3-201ENST00000249007 ZBP1Q9H171 429 aa13.71□□□□□ -0.21
RFPL3-201ENST00000249007 ARHGEF3Q9NR81 526 aa13.71□□□□□ -0.21
RFPL3-201ENST00000249007 RNF19AQ9NV58 838 aa13.71□□□□□ -0.21
RFPL3-201ENST00000249007 ZSWIM5Q9P217 1185 aa13.71□□□□□ -0.21
RFPL3-201ENST00000249007 IRAK3Q9Y616 596 aa13.71□□□□□ -0.21
RFPL3-201ENST00000249007 PNMA6FA0A0J9YX94 578 aa13.7□□□□□ -0.22
RFPL3-201ENST00000249007 PALM3A6NDB9 673 aaPredicted RBP13.7□□□□□ -0.22
RFPL3-201ENST00000249007 NT5C1B-RDH14C9J2C7 533 aa13.7□□□□□ -0.22
RFPL3-201ENST00000249007 N4BP1O75113 896 aaKnown RBP13.7□□□□□ -0.22
RFPL3-201ENST00000249007 GLULP15104 373 aa13.7□□□□□ -0.22
RFPL3-201ENST00000249007 DMWDQ09019 674 aa13.7□□□□□ -0.22
RFPL3-201ENST00000249007 ACAP1Q15027 740 aa13.7□□□□□ -0.22
RFPL3-201ENST00000249007 SLC35G1Q2M3R5 365 aa13.7□□□□□ -0.22
RFPL3-201ENST00000249007 ZNF528Q3MIS6 628 aa13.7□□□□□ -0.22
RFPL3-201ENST00000249007 PPM1JQ5JR12 505 aa13.7□□□□□ -0.22
RFPL3-201ENST00000249007 FAM228AQ86W67 206 aa13.7□□□□□ -0.22
RFPL3-201ENST00000249007 PPFIBP1Q86W92 1011 aa13.7□□□□□ -0.22
RFPL3-201ENST00000249007 SLC44A3Q8N4M1 653 aa13.7□□□□□ -0.22
RFPL3-201ENST00000249007 PJA1Q8NG27 643 aa13.7□□□□□ -0.22
RFPL3-201ENST00000249007 SMARCC2Q8TAQ2 1214 aa13.7□□□□□ -0.22
RFPL3-201ENST00000249007 ATRIPQ8WXE1 791 aa13.7□□□□□ -0.22
RFPL3-201ENST00000249007 SMG5Q9UPR3 1016 aaKnown RBP13.7□□□□□ -0.22
RFPL3-201ENST00000249007 ITGB5P18084 799 aa13.69□□□□□ -0.22
RFPL3-201ENST00000249007 KLRC1P26715 233 aa13.69□□□□□ -0.22
RFPL3-201ENST00000249007 GBP2P32456 591 aaPredicted RBP13.69□□□□□ -0.22
RFPL3-201ENST00000249007 MTMR1Q13613 665 aa13.69□□□□□ -0.22
RFPL3-201ENST00000249007 COL9A3Q14050 684 aaPredicted RBP13.69□□□□□ -0.22
RFPL3-201ENST00000249007 DSC3Q14574 896 aa13.69□□□□□ -0.22
RFPL3-201ENST00000249007 USP17L6PQ6QN14 398 aa13.69□□□□□ -0.22
RFPL3-201ENST00000249007 C15orf39Q6ZRI6 1047 aa13.69□□□□□ -0.22
RFPL3-201ENST00000249007 KIAA0319LQ8IZA0 1049 aa13.69□□□□□ -0.22
RFPL3-201ENST00000249007 RNF169Q8NCN4 708 aa13.69□□□□□ -0.22
RFPL3-201ENST00000249007 CUL5Q93034 780 aa13.69□□□□□ -0.22
RFPL3-201ENST00000249007 OSMRQ99650 979 aa13.69□□□□□ -0.22
RFPL3-201ENST00000249007 FOXQ1Q9C009 403 aa13.69□□□□□ -0.22
RFPL3-201ENST00000249007 RIOX1Q9H6W3 641 aa13.69□□□□□ -0.22
RFPL3-201ENST00000249007 JPH1Q9HDC5 661 aaPredicted RBP13.69□□□□□ -0.22
RFPL3-201ENST00000249007 PCDHGA2Q9Y5H1 932 aa13.69□□□□□ -0.22
RFPL3-201ENST00000249007 FLNBO75369 2602 aaKnown RBP13.69□□□□□ -0.22
RFPL3-201ENST00000249007 EVPLQ92817 2033 aa13.69□□□□□ -0.22
RFPL3-201ENST00000249007 DOCK8Q8NF50 2099 aa13.69□□□□□ -0.22
RFPL3-201ENST00000249007 CTSAP10619 480 aa13.68□□□□□ -0.22
RFPL3-201ENST00000249007 POLGP54098 1239 aaPredicted RBP13.68□□□□□ -0.22
RFPL3-201ENST00000249007 BCAR1P56945 870 aa13.68□□□□□ -0.22
RFPL3-201ENST00000249007 NBR1Q14596 966 aa13.68□□□□□ -0.22
RFPL3-201ENST00000249007 PTPN14Q15678 1187 aa13.68□□□□□ -0.22
RFPL3-201ENST00000249007 KIZQ2M2Z5 673 aa13.68□□□□□ -0.22
RFPL3-201ENST00000249007 CLLU1OSQ5K130 101 aa13.68□□□□□ -0.22
RFPL3-201ENST00000249007 DCLRE1AQ6PJP8 1040 aa13.68□□□□□ -0.22
RFPL3-201ENST00000249007 PPP4R3CPQ6ZMV5 832 aa13.68□□□□□ -0.22
RFPL3-201ENST00000249007 PLPPR4Q7Z2D5 763 aa13.68□□□□□ -0.22
RFPL3-201ENST00000249007 NXPE3Q969Y0 559 aa13.68□□□□□ -0.22
RFPL3-201ENST00000249007 PPP1R16BQ96T49 567 aa13.68□□□□□ -0.22
RFPL3-201ENST00000249007 SPATA6Q9NWH7 488 aaPredicted RBP13.68□□□□□ -0.22
RFPL3-201ENST00000249007 FBXO4Q9UKT5 387 aa13.68□□□□□ -0.22
RFPL3-201ENST00000249007 LAMA4Q16363 1823 aa13.68□□□□□ -0.22
RFPL3-201ENST00000249007 LAMTOR5O43504 91 aa13.67□□□□□ -0.22
RFPL3-201ENST00000249007 CYTH3O43739 400 aa13.67□□□□□ -0.22
RFPL3-201ENST00000249007 TGM1P22735 817 aa13.67□□□□□ -0.22
RFPL3-201ENST00000249007 STAT5BP51692 787 aa13.67□□□□□ -0.22
RFPL3-201ENST00000249007 CRYBB1P53674 252 aaPredicted RBP13.67□□□□□ -0.22
RFPL3-201ENST00000249007 NMIQ13287 307 aaPredicted RBP13.67□□□□□ -0.22
RFPL3-201ENST00000249007 TMEM173Q86WV6 379 aaPredicted RBP13.67□□□□□ -0.22
RFPL3-201ENST00000249007 STAMQ92783 540 aa13.67□□□□□ -0.22
RFPL3-201ENST00000249007 MRPL9Q9BYD2 267 aaKnown RBP13.67□□□□□ -0.22
RFPL3-201ENST00000249007 ZMYND15Q9H091 742 aa13.67□□□□□ -0.22
RFPL3-201ENST00000249007 EPC1Q9H2F5 836 aa13.67□□□□□ -0.22
RFPL3-201ENST00000249007 SH2B1Q9NRF2 756 aaPredicted RBP13.67□□□□□ -0.22
RFPL3-201ENST00000249007 EPS15L1Q9UBC2 864 aa13.67□□□□□ -0.22
RFPL3-201ENST00000249007 SLC9A2Q9UBY0 812 aa13.67□□□□□ -0.22
RFPL3-201ENST00000249007 MIA3Q5JRA6 1907 aa13.67□□□□□ -0.22
RFPL3-201ENST00000249007 PIK3CDO00329 1044 aa13.67□□□□□ -0.22
RFPL3-201ENST00000249007 ZC3H11AO75152 810 aaKnown RBP eCLIP13.67□□□□□ -0.22
RFPL3-201ENST00000249007 LRRN2O75325 713 aa13.67□□□□□ -0.22
RFPL3-201ENST00000249007 DDX53Q86TM3 631 aaKnown RBP13.67□□□□□ -0.22
RFPL3-201ENST00000249007 ECHDC2Q86YB7 292 aa13.67□□□□□ -0.22
RFPL3-201ENST00000249007 HELQQ8TDG4 1101 aa13.67□□□□□ -0.22
RFPL3-201ENST00000249007 BCO2Q9BYV7 579 aa13.67□□□□□ -0.22
RFPL3-201ENST00000249007 MEIS2O14770 477 aa13.66□□□□□ -0.22
RFPL3-201ENST00000249007 ZSCAN20P17040 1043 aaPredicted RBP13.66□□□□□ -0.22
RFPL3-201ENST00000249007 KLRC2P26717 231 aa13.66□□□□□ -0.22
RFPL3-201ENST00000249007 SLC26A2P50443 739 aa13.66□□□□□ -0.22
RFPL3-201ENST00000249007 CLCN4P51793 760 aa13.66□□□□□ -0.22
RFPL3-201ENST00000249007 MFAP1P55081 439 aaKnown RBP13.66□□□□□ -0.22
RFPL3-201ENST00000249007 ACTR2P61160 394 aa13.66□□□□□ -0.22
RFPL3-201ENST00000249007 HNRNPUQ00839 825 aaKnown RBP eCLIP13.66□□□□□ -0.22
RFPL3-201ENST00000249007 CSTF1Q05048 431 aaKnown RBP13.66□□□□□ -0.22
RFPL3-201ENST00000249007 ZBTB44Q8NCP5 570 aa13.66□□□□□ -0.22
RFPL3-201ENST00000249007 PIBF1Q8WXW3 757 aa13.66□□□□□ -0.22
RFPL3-201ENST00000249007 SHDQ96IW2 340 aa13.66□□□□□ -0.22
RFPL3-201ENST00000249007 KRT23Q9C075 422 aa13.66□□□□□ -0.22
RFPL3-201ENST00000249007 WDR6Q9NNW5 1121 aaKnown RBP13.66□□□□□ -0.22
RFPL3-201ENST00000249007 GMEB2Q9UKD1 530 aa13.66□□□□□ -0.22
RFPL3-201ENST00000249007 ANGPTL2Q9UKU9 493 aa13.66□□□□□ -0.22
RFPL3-201ENST00000249007 CLUHO75153 1309 aa13.65□□□□□ -0.22
RFPL3-201ENST00000249007 SLC30A4O14863 429 aa13.65□□□□□ -0.22
RFPL3-201ENST00000249007 MAFGO15525 162 aa13.65□□□□□ -0.22
RFPL3-201ENST00000249007 HOXB3P14651 431 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms