RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 PLGRKTQ9HBL7 147 aa13.77□□□□□ -0.21
VAMP4-201ENST00000236192 MTO1Q9Y2Z2 717 aaKnown RBP13.77□□□□□ -0.21
VAMP4-201ENST00000236192 MED23Q9ULK4 1368 aa13.76□□□□□ -0.21
VAMP4-201ENST00000236192 MAP4P27816 1152 aaKnown RBP13.76□□□□□ -0.21
VAMP4-201ENST00000236192 TFAP4Q01664 338 aa13.76□□□□□ -0.21
VAMP4-201ENST00000236192 KCNMA1Q12791 1236 aa13.76□□□□□ -0.21
VAMP4-201ENST00000236192 ITGA9Q13797 1035 aa13.76□□□□□ -0.21
VAMP4-201ENST00000236192 NELFCDQ8IXH7 590 aa13.76□□□□□ -0.21
VAMP4-201ENST00000236192 ZNF570Q96NI8 536 aa13.76□□□□□ -0.21
VAMP4-201ENST00000236192 CCDC134Q9H6E4 229 aa13.76□□□□□ -0.21
VAMP4-201ENST00000236192 TLR7Q9NYK1 1049 aaKnown RBP13.76□□□□□ -0.21
VAMP4-201ENST00000236192 CCNT1O60563 726 aaKnown RBP13.76□□□□□ -0.21
VAMP4-201ENST00000236192 HOXA7P31268 230 aaPredicted RBP13.76□□□□□ -0.21
VAMP4-201ENST00000236192 HDAC4P56524 1084 aa13.76□□□□□ -0.21
VAMP4-201ENST00000236192 KAZNQ674X7 775 aa13.76□□□□□ -0.21
VAMP4-201ENST00000236192 CCDC125Q86Z20 511 aa13.76□□□□□ -0.21
VAMP4-201ENST00000236192 RIBC1Q8N443 379 aaPredicted RBP13.76□□□□□ -0.21
VAMP4-201ENST00000236192 EIF1ADQ8N9N8 165 aaKnown RBP13.76□□□□□ -0.21
VAMP4-201ENST00000236192 AGPAT5Q9NUQ2 364 aa13.76□□□□□ -0.21
VAMP4-201ENST00000236192 FANCAO15360 1455 aa13.76□□□□□ -0.21
VAMP4-201ENST00000236192 SNX3O60493 162 aa13.76□□□□□ -0.21
VAMP4-201ENST00000236192 SKIV2L2P42285 1042 aaKnown RBP13.76□□□□□ -0.21
VAMP4-201ENST00000236192 ARHGAP4P98171 946 aa13.76□□□□□ -0.21
VAMP4-201ENST00000236192 SLC29A2Q14542 456 aa13.76□□□□□ -0.21
VAMP4-201ENST00000236192 STAT4Q14765 748 aa13.76□□□□□ -0.21
VAMP4-201ENST00000236192 ZNF444Q8N0Y2 327 aaPredicted RBP13.76□□□□□ -0.21
VAMP4-201ENST00000236192 TRIM51Q9BSJ1 452 aa13.76□□□□□ -0.21
VAMP4-201ENST00000236192 EDEM3Q9BZQ6 932 aa13.76□□□□□ -0.21
VAMP4-201ENST00000236192 F8VZ95 297 aa13.76□□□□□ -0.21
VAMP4-201ENST00000236192 INHBAP08476 426 aa13.76□□□□□ -0.21
VAMP4-201ENST00000236192 EXOC3L4Q17RC7 722 aa13.76□□□□□ -0.21
VAMP4-201ENST00000236192 TMC5Q6UXY8 1006 aa13.76□□□□□ -0.21
VAMP4-201ENST00000236192 NCCRP1Q6ZVX7 275 aaPredicted RBP13.76□□□□□ -0.21
VAMP4-201ENST00000236192 SERPINB12Q96P63 405 aa13.76□□□□□ -0.21
VAMP4-201ENST00000236192 OSBPL8Q9BZF1 889 aa13.76□□□□□ -0.21
VAMP4-201ENST00000236192 PRELID1Q9Y255 219 aa13.76□□□□□ -0.21
VAMP4-201ENST00000236192 ASXL2Q76L83 1435 aa13.75□□□□□ -0.21
VAMP4-201ENST00000236192 SSU72P8A0A1W2PR75 194 aa13.75□□□□□ -0.21
VAMP4-201ENST00000236192 B2RBV5 119 aa13.75□□□□□ -0.21
VAMP4-201ENST00000236192 GOLGA8TH3BQL2 631 aa13.75□□□□□ -0.21
VAMP4-201ENST00000236192 GOLGA8HP0CJ92 632 aa13.75□□□□□ -0.21
VAMP4-201ENST00000236192 SERPINB1P30740 379 aa13.75□□□□□ -0.21
VAMP4-201ENST00000236192 TIMM10P62072 90 aa13.75□□□□□ -0.21
VAMP4-201ENST00000236192 TOM1L2Q6ZVM7 507 aa13.75□□□□□ -0.21
VAMP4-201ENST00000236192 CREG2Q8IUH2 290 aa13.75□□□□□ -0.21
VAMP4-201ENST00000236192 PHTF1Q9UMS5 762 aa13.75□□□□□ -0.21
VAMP4-201ENST00000236192 RTN2O75298 545 aa13.75□□□□□ -0.21
VAMP4-201ENST00000236192 ENO1P06733 434 aaKnown RBP13.75□□□□□ -0.21
VAMP4-201ENST00000236192 LINGO3P0C6S8 592 aa13.75□□□□□ -0.21
VAMP4-201ENST00000236192 ETS2P15036 469 aa13.75□□□□□ -0.21
VAMP4-201ENST00000236192 PDAP1Q13442 181 aaKnown RBP13.75□□□□□ -0.21
VAMP4-201ENST00000236192 ZBED2Q9BTP6 218 aa13.75□□□□□ -0.21
VAMP4-201ENST00000236192 THTPAQ9BU02 230 aa13.75□□□□□ -0.21
VAMP4-201ENST00000236192 DNAI2Q9GZS0 605 aa13.75□□□□□ -0.21
VAMP4-201ENST00000236192 RANBP17Q9H2T7 1088 aaKnown RBP13.75□□□□□ -0.21
VAMP4-201ENST00000236192 ADAM22Q9P0K1 906 aa13.75□□□□□ -0.21
VAMP4-201ENST00000236192 FKBP6O75344 327 aa13.75□□□□□ -0.21
VAMP4-201ENST00000236192 EPHB2P29323 1055 aa13.75□□□□□ -0.21
VAMP4-201ENST00000236192 PARP6Q2NL67 630 aa13.75□□□□□ -0.21
VAMP4-201ENST00000236192 BARGINQ6ZT62 677 aa13.75□□□□□ -0.21
VAMP4-201ENST00000236192 USP37Q86T82 979 aa13.75□□□□□ -0.21
VAMP4-201ENST00000236192 FANCBQ8NB91 859 aa13.75□□□□□ -0.21
VAMP4-201ENST00000236192 XAGE3Q8WTP9 111 aa13.75□□□□□ -0.21
VAMP4-201ENST00000236192 BHMTQ93088 406 aa13.75□□□□□ -0.21
VAMP4-201ENST00000236192 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.75□□□□□ -0.21
VAMP4-201ENST00000236192 LMCD1Q9NZU5 365 aa13.75□□□□□ -0.21
VAMP4-201ENST00000236192 ZNF232Q9UNY5 417 aa13.75□□□□□ -0.21
VAMP4-201ENST00000236192 COL4A3BPQ9Y5P4 624 aa13.75□□□□□ -0.21
VAMP4-201ENST00000236192 USP42Q9H9J4 1324 aaKnown RBP13.75□□□□□ -0.21
VAMP4-201ENST00000236192 ABCC1P33527 1531 aa13.75□□□□□ -0.21
VAMP4-201ENST00000236192 MIF4GDA9UHW6 222 aaKnown RBP13.75□□□□□ -0.21
VAMP4-201ENST00000236192 KPNA4O00629 521 aaPredicted RBP13.75□□□□□ -0.21
VAMP4-201ENST00000236192 LGR5O75473 907 aa13.75□□□□□ -0.21
VAMP4-201ENST00000236192 PSMG1O95456 288 aa13.75□□□□□ -0.21
VAMP4-201ENST00000236192 TUBA4AP68366 448 aa13.75□□□□□ -0.21
VAMP4-201ENST00000236192 NR5A1Q13285 461 aa13.75□□□□□ -0.21
VAMP4-201ENST00000236192 TTC25Q96NG3 672 aa13.75□□□□□ -0.21
VAMP4-201ENST00000236192 METTL5Q9NRN9 209 aaKnown RBP13.75□□□□□ -0.21
VAMP4-201ENST00000236192 RABGEF1Q9UJ41 708 aa13.75□□□□□ -0.21
VAMP4-201ENST00000236192 CDH16O75309 829 aa13.74□□□□□ -0.21
VAMP4-201ENST00000236192 ARL1P40616 181 aaPredicted RBP13.74□□□□□ -0.21
VAMP4-201ENST00000236192 KIF22Q14807 665 aa13.74□□□□□ -0.21
VAMP4-201ENST00000236192 HERC4Q5GLZ8 1057 aaPredicted RBP13.74□□□□□ -0.21
VAMP4-201ENST00000236192 LIN9Q5TKA1 542 aa13.74□□□□□ -0.21
VAMP4-201ENST00000236192 TMEM139Q8IV31 216 aa13.74□□□□□ -0.21
VAMP4-201ENST00000236192 HELBQ8NG08 1087 aaPredicted RBP13.74□□□□□ -0.21
VAMP4-201ENST00000236192 DTNAQ9Y4J8 743 aa13.74□□□□□ -0.21
VAMP4-201ENST00000236192 ERFP50548 548 aa13.74□□□□□ -0.21
VAMP4-201ENST00000236192 CABP4P57796 275 aa13.74□□□□□ -0.21
VAMP4-201ENST00000236192 KRT76Q01546 638 aa13.74□□□□□ -0.21
VAMP4-201ENST00000236192 ADAM9Q13443 819 aa13.74□□□□□ -0.21
VAMP4-201ENST00000236192 ZNF654Q8IZM8 581 aa13.74□□□□□ -0.21
VAMP4-201ENST00000236192 CCDC89Q8N998 374 aa13.74□□□□□ -0.21
VAMP4-201ENST00000236192 FBXO2Q9UK22 296 aaPredicted RBP13.74□□□□□ -0.21
VAMP4-201ENST00000236192 MATN2O00339 956 aa13.74□□□□□ -0.21
VAMP4-201ENST00000236192 ATP1A4Q13733 1029 aa13.74□□□□□ -0.21
VAMP4-201ENST00000236192 MESDQ14696 234 aa13.74□□□□□ -0.21
VAMP4-201ENST00000236192 LIN52Q52LA3 116 aa13.74□□□□□ -0.21
VAMP4-201ENST00000236192 TAF1BQ53T94 588 aaPredicted RBP13.74□□□□□ -0.21
VAMP4-201ENST00000236192 SPDYCQ5MJ68 293 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms