RNA–Protein interactions for RNA: ENST00000164139.3

PYGM-201, Transcript of glycogen phosphorylase, muscle associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PYGM, Length 3,198 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PYGM-201ENST00000164139 ZNF543Q08ER8 600 aa13.9□□□□□ -0.18
PYGM-201ENST00000164139 RBM46Q8TBY0 533 aaKnown RBP13.9□□□□□ -0.18
PYGM-201ENST00000164139 PSMD1Q99460 953 aa13.9□□□□□ -0.18
PYGM-201ENST00000164139 ABCF3Q9NUQ8 709 aa13.9□□□□□ -0.18
PYGM-201ENST00000164139 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.9□□□□□ -0.18
PYGM-201ENST00000164139 TULP1O00294 542 aaPredicted RBP13.9□□□□□ -0.18
PYGM-201ENST00000164139 TTI1O43156 1089 aa13.9□□□□□ -0.18
PYGM-201ENST00000164139 RPS6KA4O75676 772 aa13.9□□□□□ -0.18
PYGM-201ENST00000164139 FLOT1O75955 427 aa13.9□□□□□ -0.18
PYGM-201ENST00000164139 DRD4P21917 467 aa13.9□□□□□ -0.18
PYGM-201ENST00000164139 PON1P27169 355 aa13.9□□□□□ -0.18
PYGM-201ENST00000164139 NOVP48745 357 aa13.9□□□□□ -0.18
PYGM-201ENST00000164139 EDRF1Q3B7T1 1238 aa13.9□□□□□ -0.18
PYGM-201ENST00000164139 HYIQ5T013 277 aa13.9□□□□□ -0.18
PYGM-201ENST00000164139 GJB7Q6PEY0 223 aa13.9□□□□□ -0.18
PYGM-201ENST00000164139 FAM196AQ6ZSG2 479 aa13.9□□□□□ -0.18
PYGM-201ENST00000164139 DAAM2Q86T65 1068 aa13.9□□□□□ -0.18
PYGM-201ENST00000164139 LRRC34Q8IZ02 419 aa13.9□□□□□ -0.18
PYGM-201ENST00000164139 U2AF1L4Q8WU68 220 aaKnown RBP13.9□□□□□ -0.18
PYGM-201ENST00000164139 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.9□□□□□ -0.18
PYGM-201ENST00000164139 ZNF570Q96NI8 536 aa13.9□□□□□ -0.18
PYGM-201ENST00000164139 XPO6Q96QU8 1125 aaKnown RBP13.9□□□□□ -0.18
PYGM-201ENST00000164139 CAND2O75155 1236 aa13.89□□□□□ -0.19
PYGM-201ENST00000164139 SMIM24O75264 130 aa13.89□□□□□ -0.19
PYGM-201ENST00000164139 LGR5O75473 907 aa13.89□□□□□ -0.19
PYGM-201ENST00000164139 H2AFZP0C0S5 128 aa13.89□□□□□ -0.19
PYGM-201ENST00000164139 XRCC5P13010 732 aaKnown RBP13.89□□□□□ -0.19
PYGM-201ENST00000164139 PABPC4Q13310 644 aaKnown RBP eCLIP13.89□□□□□ -0.19
PYGM-201ENST00000164139 LRRC14Q15048 493 aa13.89□□□□□ -0.19
PYGM-201ENST00000164139 TAF11Q15544 211 aa13.89□□□□□ -0.19
PYGM-201ENST00000164139 H2AFVQ71UI9 128 aa13.89□□□□□ -0.19
PYGM-201ENST00000164139 ERICH1Q86X53 443 aa13.89□□□□□ -0.19
PYGM-201ENST00000164139 KLHL29Q96CT2 875 aa13.89□□□□□ -0.19
PYGM-201ENST00000164139 DHX36Q9H2U1 1008 aaKnown RBP13.89□□□□□ -0.19
PYGM-201ENST00000164139 SWAP70Q9UH65 585 aa13.89□□□□□ -0.19
PYGM-201ENST00000164139 BZW2Q9Y6E2 419 aaKnown RBP13.89□□□□□ -0.19
PYGM-201ENST00000164139 RIMBP2O15034 1052 aa13.89□□□□□ -0.19
PYGM-201ENST00000164139 PSMC6P62333 389 aa13.89□□□□□ -0.19
PYGM-201ENST00000164139 CCDC38Q502W7 563 aa13.89□□□□□ -0.19
PYGM-201ENST00000164139 PPP1R18Q6NYC8 613 aa13.89□□□□□ -0.19
PYGM-201ENST00000164139 PPP4R3CPQ6ZMV5 832 aa13.89□□□□□ -0.19
PYGM-201ENST00000164139 SFR1Q86XK3 245 aa13.89□□□□□ -0.19
PYGM-201ENST00000164139 PRMT1Q99873 361 aaKnown RBP13.89□□□□□ -0.19
PYGM-201ENST00000164139 ETAA1Q9NY74 926 aa13.89□□□□□ -0.19
PYGM-201ENST00000164139 GGA2Q9UJY4 613 aa13.89□□□□□ -0.19
PYGM-201ENST00000164139 AJAP1Q9UKB5 411 aaPredicted RBP13.89□□□□□ -0.19
PYGM-201ENST00000164139 MYH4Q9Y623 1939 aa13.89□□□□□ -0.19
PYGM-201ENST00000164139 C6orf229H3BNL8 230 aa13.89□□□□□ -0.19
PYGM-201ENST00000164139 DNAJC8O75937 253 aaPredicted RBP13.89□□□□□ -0.19
PYGM-201ENST00000164139 TTLL1O95922 423 aa13.89□□□□□ -0.19
PYGM-201ENST00000164139 SNHG28P0DPA3 235 aa13.89□□□□□ -0.19
PYGM-201ENST00000164139 DPY19L2P1Q6NXN4 242 aa13.89□□□□□ -0.19
PYGM-201ENST00000164139 SLC17A8Q8NDX2 589 aa13.89□□□□□ -0.19
PYGM-201ENST00000164139 LBHD1Q9BQE6 289 aaPredicted RBP13.89□□□□□ -0.19
PYGM-201ENST00000164139 UBAP1LF5GYI3 381 aa13.88□□□□□ -0.19
PYGM-201ENST00000164139 IGF2BP3O00425 579 aaKnown RBP eCLIP13.88□□□□□ -0.19
PYGM-201ENST00000164139 PPIP5K2O43314 1243 aa13.88□□□□□ -0.19
PYGM-201ENST00000164139 UBOX5O94941 541 aa13.88□□□□□ -0.19
PYGM-201ENST00000164139 COPB2P35606 906 aa13.88□□□□□ -0.19
PYGM-201ENST00000164139 ALDH5A1P51649 535 aaPredicted RBP13.88□□□□□ -0.19
PYGM-201ENST00000164139 SLC12A3P55017 1021 aa13.88□□□□□ -0.19
PYGM-201ENST00000164139 KNOP1Q1ED39 458 aaKnown RBP13.88□□□□□ -0.19
PYGM-201ENST00000164139 FRMD5Q7Z6J6 570 aa13.88□□□□□ -0.19
PYGM-201ENST00000164139 VPS36Q86VN1 386 aa13.88□□□□□ -0.19
PYGM-201ENST00000164139 EIF1ADQ8N9N8 165 aaKnown RBP13.88□□□□□ -0.19
PYGM-201ENST00000164139 KDM4CQ9H3R0 1056 aa13.88□□□□□ -0.19
PYGM-201ENST00000164139 BATF3Q9NR55 127 aa13.88□□□□□ -0.19
PYGM-201ENST00000164139 TRIM33Q9UPN9 1127 aa13.88□□□□□ -0.19
PYGM-201ENST00000164139 AGAP1Q9UPQ3 857 aa13.88□□□□□ -0.19
PYGM-201ENST00000164139 ZBTB5O15062 677 aa13.88□□□□□ -0.19
PYGM-201ENST00000164139 CLIC2O15247 247 aa13.88□□□□□ -0.19
PYGM-201ENST00000164139 AKAP3O75969 853 aa13.88□□□□□ -0.19
PYGM-201ENST00000164139 GFPT2O94808 682 aa13.88□□□□□ -0.19
PYGM-201ENST00000164139 SNUPNO95149 360 aaKnown RBP13.88□□□□□ -0.19
PYGM-201ENST00000164139 SHBGP04278 402 aa13.88□□□□□ -0.19
PYGM-201ENST00000164139 PCK1P35558 622 aa13.88□□□□□ -0.19
PYGM-201ENST00000164139 BIRC3Q13489 604 aa13.88□□□□□ -0.19
PYGM-201ENST00000164139 ZC3H3Q8IXZ2 948 aaKnown RBP13.88□□□□□ -0.19
PYGM-201ENST00000164139 CCDC26Q8TAB7 109 aa13.88□□□□□ -0.19
PYGM-201ENST00000164139 MTFR1LQ9H019 292 aa13.88□□□□□ -0.19
PYGM-201ENST00000164139 ECT2Q9H8V3 914 aa13.88□□□□□ -0.19
PYGM-201ENST00000164139 INTS9Q9NV88 658 aaKnown RBP13.88□□□□□ -0.19
PYGM-201ENST00000164139 CCDC188H7C350 402 aa13.87□□□□□ -0.19
PYGM-201ENST00000164139 CASP4P49662 377 aa13.87□□□□□ -0.19
PYGM-201ENST00000164139 ADCY2Q08462 1091 aa13.87□□□□□ -0.19
PYGM-201ENST00000164139 MTMR3Q13615 1198 aa13.87□□□□□ -0.19
PYGM-201ENST00000164139 GIT2Q14161 759 aa13.87□□□□□ -0.19
PYGM-201ENST00000164139 C11orf91Q3C1V1 193 aa13.87□□□□□ -0.19
PYGM-201ENST00000164139 TRAPPC3LQ5T215 181 aa13.87□□□□□ -0.19
PYGM-201ENST00000164139 TRPM8Q7Z2W7 1104 aa13.87□□□□□ -0.19
PYGM-201ENST00000164139 SLF2Q8IX21 1173 aa13.87□□□□□ -0.19
PYGM-201ENST00000164139 CNBD1Q8NA66 436 aa13.87□□□□□ -0.19
PYGM-201ENST00000164139 MAGEC3Q8TD91 643 aa13.87□□□□□ -0.19
PYGM-201ENST00000164139 TRIM51Q9BSJ1 452 aa13.87□□□□□ -0.19
PYGM-201ENST00000164139 OSBPL1AQ9BXW6 950 aa13.87□□□□□ -0.19
PYGM-201ENST00000164139 GCNT4Q9P109 453 aa13.87□□□□□ -0.19
PYGM-201ENST00000164139 PCDHB13Q9Y5F0 798 aa13.87□□□□□ -0.19
PYGM-201ENST00000164139 DDX3XO00571 662 aaKnown RBP eCLIP13.87□□□□□ -0.19
PYGM-201ENST00000164139 SLURP2P0DP57 97 aa13.87□□□□□ -0.19
PYGM-201ENST00000164139 ADCY1Q08828 1119 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms