RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 MTUS1Q9ULD2 1270 aa13.09□□□□□ -0.31
CHPF2-201ENST00000035307 IQCA1LA6NCM1 817 aa13.08□□□□□ -0.31
CHPF2-201ENST00000035307 GNA14O95837 355 aa13.08□□□□□ -0.31
CHPF2-201ENST00000035307 TREML2Q5T2D2 321 aa13.08□□□□□ -0.31
CHPF2-201ENST00000035307 ANKRD13AQ8IZ07 590 aa13.08□□□□□ -0.31
CHPF2-201ENST00000035307 CDCA5Q96FF9 252 aa13.08□□□□□ -0.31
CHPF2-201ENST00000035307 HIP1RO75146 1068 aa13.08□□□□□ -0.32
CHPF2-201ENST00000035307 HNRNPH2P55795 449 aaKnown RBP13.08□□□□□ -0.32
CHPF2-201ENST00000035307 SYTL5Q8TDW5 730 aaPredicted RBP13.08□□□□□ -0.32
CHPF2-201ENST00000035307 GMCL1Q96IK5 515 aa13.08□□□□□ -0.32
CHPF2-201ENST00000035307 CCSER1Q9C0I3 900 aa13.08□□□□□ -0.32
CHPF2-201ENST00000035307 UNC45AQ9H3U1 944 aa13.08□□□□□ -0.32
CHPF2-201ENST00000035307 MTRF1LQ9UGC7 380 aaKnown RBP13.08□□□□□ -0.32
CHPF2-201ENST00000035307 MYO5AQ9Y4I1 1855 aaKnown RBP13.08□□□□□ -0.32
CHPF2-201ENST00000035307 TMOD1P28289 359 aa13.08□□□□□ -0.32
CHPF2-201ENST00000035307 ZNF394Q53GI3 561 aa13.08□□□□□ -0.32
CHPF2-201ENST00000035307 DCUN1D2Q6PH85 259 aa13.08□□□□□ -0.32
CHPF2-201ENST00000035307 SIAH1Q8IUQ4 282 aa13.08□□□□□ -0.32
CHPF2-201ENST00000035307 FBXO16Q8IX29 292 aaPredicted RBP13.08□□□□□ -0.32
CHPF2-201ENST00000035307 MAGEF1Q9HAY2 307 aa13.08□□□□□ -0.32
CHPF2-201ENST00000035307 ATP8A1Q9Y2Q0 1164 aa13.08□□□□□ -0.32
CHPF2-201ENST00000035307 COL4A1P02462 1669 aa13.07□□□□□ -0.32
CHPF2-201ENST00000035307 QARSP47897 775 aaKnown RBP13.07□□□□□ -0.32
CHPF2-201ENST00000035307 KCNA1Q09470 495 aa13.07□□□□□ -0.32
CHPF2-201ENST00000035307 TATDN1Q6P1N9 297 aa13.07□□□□□ -0.32
CHPF2-201ENST00000035307 MMP19Q99542 508 aa13.07□□□□□ -0.32
CHPF2-201ENST00000035307 LACRTQ9GZZ8 138 aa13.07□□□□□ -0.32
CHPF2-201ENST00000035307 JRKLQ9Y4A0 524 aa13.07□□□□□ -0.32
CHPF2-201ENST00000035307 VWA5AO00534 786 aa13.07□□□□□ -0.32
CHPF2-201ENST00000035307 ZBTB22O15209 634 aa13.07□□□□□ -0.32
CHPF2-201ENST00000035307 N4BP1O75113 896 aaKnown RBP13.07□□□□□ -0.32
CHPF2-201ENST00000035307 ICAM1P05362 532 aa13.07□□□□□ -0.32
CHPF2-201ENST00000035307 ATF7P17544 494 aaPredicted RBP13.07□□□□□ -0.32
CHPF2-201ENST00000035307 PRPHP41219 470 aa13.07□□□□□ -0.32
CHPF2-201ENST00000035307 HIRAP54198 1017 aaPredicted RBP13.07□□□□□ -0.32
CHPF2-201ENST00000035307 PLTPP55058 493 aa13.07□□□□□ -0.32
CHPF2-201ENST00000035307 ATP6V0A1Q93050 837 aa13.07□□□□□ -0.32
CHPF2-201ENST00000035307 FAM20AQ96MK3 541 aa13.07□□□□□ -0.32
CHPF2-201ENST00000035307 KIF4AO95239 1232 aa13.07□□□□□ -0.32
CHPF2-201ENST00000035307 TXNP10599 105 aaKnown RBP13.07□□□□□ -0.32
CHPF2-201ENST00000035307 ACTN2P35609 894 aa13.07□□□□□ -0.32
CHPF2-201ENST00000035307 TAF1CQ15572 869 aaPredicted RBP13.07□□□□□ -0.32
CHPF2-201ENST00000035307 ZNF365Q70YC5 407 aa13.07□□□□□ -0.32
CHPF2-201ENST00000035307 ANKS1AQ92625 1134 aa13.07□□□□□ -0.32
CHPF2-201ENST00000035307 DDX47Q9H0S4 455 aaKnown RBP13.07□□□□□ -0.32
CHPF2-201ENST00000035307 RNF19AQ9NV58 838 aa13.07□□□□□ -0.32
CHPF2-201ENST00000035307 NR3C1P04150 777 aa13.06□□□□□ -0.32
CHPF2-201ENST00000035307 YBX3P16989 372 aaKnown RBP eCLIP13.06□□□□□ -0.32
CHPF2-201ENST00000035307 SLC9A1P19634 815 aa13.06□□□□□ -0.32
CHPF2-201ENST00000035307 TUBB4BP68371 445 aa13.06□□□□□ -0.32
CHPF2-201ENST00000035307 LRRC63Q05C16 580 aa13.06□□□□□ -0.32
CHPF2-201ENST00000035307 TRPC3Q13507 836 aa13.06□□□□□ -0.32
CHPF2-201ENST00000035307 ECM1Q16610 540 aa13.06□□□□□ -0.32
CHPF2-201ENST00000035307 GJB7Q6PEY0 223 aa13.06□□□□□ -0.32
CHPF2-201ENST00000035307 MICALCLQ6ZW33 695 aa13.06□□□□□ -0.32
CHPF2-201ENST00000035307 UBL4BQ8N7F7 174 aa13.06□□□□□ -0.32
CHPF2-201ENST00000035307 ANKRD7Q92527 254 aa13.06□□□□□ -0.32
CHPF2-201ENST00000035307 HAS1Q92839 578 aa13.06□□□□□ -0.32
CHPF2-201ENST00000035307 TRIM6Q9C030 488 aaPredicted RBP13.06□□□□□ -0.32
CHPF2-201ENST00000035307 LIMA1Q9UHB6 759 aaKnown RBP13.06□□□□□ -0.32
CHPF2-201ENST00000035307 LAMB4A4D0S4 1761 aa13.06□□□□□ -0.32
CHPF2-201ENST00000035307 WDR64B1ANS9 1081 aa13.06□□□□□ -0.32
CHPF2-201ENST00000035307 ATP9AO75110 1047 aa13.06□□□□□ -0.32
CHPF2-201ENST00000035307 PSMC2P35998 433 aaKnown RBP13.06□□□□□ -0.32
CHPF2-201ENST00000035307 CCDC121Q6ZUS5 278 aa13.06□□□□□ -0.32
CHPF2-201ENST00000035307 GLYCTKQ8IVS8 523 aa13.06□□□□□ -0.32
CHPF2-201ENST00000035307 TISP43B9A030 160 aa13.06□□□□□ -0.32
CHPF2-201ENST00000035307 MAGOHBQ96A72 148 aaKnown RBP13.06□□□□□ -0.32
CHPF2-201ENST00000035307 SPATA33Q96N06 139 aa13.06□□□□□ -0.32
CHPF2-201ENST00000035307 PNMA5Q96PV4 448 aa13.06□□□□□ -0.32
CHPF2-201ENST00000035307 MXRA8Q9BRK3 442 aa13.06□□□□□ -0.32
CHPF2-201ENST00000035307 NUCKS1Q9H1E3 243 aaKnown RBP13.06□□□□□ -0.32
CHPF2-201ENST00000035307 RASSF4Q9H2L5 321 aa13.06□□□□□ -0.32
CHPF2-201ENST00000035307 NMRK2Q9NPI5 230 aa13.06□□□□□ -0.32
CHPF2-201ENST00000035307 INTS13Q9NVM9 706 aa13.06□□□□□ -0.32
CHPF2-201ENST00000035307 AGTPBP1Q9UPW5 1226 aa13.06□□□□□ -0.32
CHPF2-201ENST00000035307 DENND3A2RUS2 1198 aa13.05□□□□□ -0.32
CHPF2-201ENST00000035307 ABL1P00519 1130 aa13.05□□□□□ -0.32
CHPF2-201ENST00000035307 YWHABP31946 246 aaKnown RBP13.05□□□□□ -0.32
CHPF2-201ENST00000035307 CA8P35219 290 aa13.05□□□□□ -0.32
CHPF2-201ENST00000035307 PPFIA1Q13136 1202 aa13.05□□□□□ -0.32
CHPF2-201ENST00000035307 TKFCQ3LXA3 575 aa13.05□□□□□ -0.32
CHPF2-201ENST00000035307 SCARA5Q6ZMJ2 495 aa13.05□□□□□ -0.32
CHPF2-201ENST00000035307 RHPN2Q8IUC4 686 aa13.05□□□□□ -0.32
CHPF2-201ENST00000035307 CCDC170Q8IYT3 715 aa13.05□□□□□ -0.32
CHPF2-201ENST00000035307 METTL14Q9HCE5 456 aaKnown RBP13.05□□□□□ -0.32
CHPF2-201ENST00000035307 CTIFO43310 598 aaKnown RBP13.05□□□□□ -0.32
CHPF2-201ENST00000035307 NEBLO76041 1014 aa13.05□□□□□ -0.32
CHPF2-201ENST00000035307 LRRC1Q9BTT6 524 aa13.05□□□□□ -0.32
CHPF2-201ENST00000035307 JPH1Q9HDC5 661 aaPredicted RBP13.05□□□□□ -0.32
CHPF2-201ENST00000035307 ABCA3Q99758 1704 aa13.05□□□□□ -0.32
CHPF2-201ENST00000035307 CD58P19256 250 aa13.05□□□□□ -0.32
CHPF2-201ENST00000035307 CASP4P49662 377 aa13.05□□□□□ -0.32
CHPF2-201ENST00000035307 CCNA1P78396 465 aa13.05□□□□□ -0.32
CHPF2-201ENST00000035307 NFX1Q12986 1120 aaKnown RBP13.05□□□□□ -0.32
CHPF2-201ENST00000035307 PDCLQ13371 301 aa13.05□□□□□ -0.32
CHPF2-201ENST00000035307 LY6KQ17RY6 165 aa13.05□□□□□ -0.32
CHPF2-201ENST00000035307 GMCL1P1Q8NEA9 526 aa13.05□□□□□ -0.32
CHPF2-201ENST00000035307 TRAPPC12Q8WVT3 735 aa13.05□□□□□ -0.32
CHPF2-201ENST00000035307 KIFAP3Q92845 792 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms