RNA–Protein interactions for RNA: ENSMUST00000086483.3

Ccdc60-202, Transcript of Coiled-coil domain-containing protein 60, mousemouse

TSL 1 (best) BASIC

Gene Ccdc60, Length 2,168 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-202ENSMUST00000086483 Me1P06801 572 aa12.28□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 Lrrc4bP0C192 709 aa12.28□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 Gna11P21278 359 aa12.28□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 Clcn3P51791 818 aa12.28□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 Rit2P70425 217 aa12.28□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 Akap7Q7TN79 314 aa12.28□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 Atp6v0d2Q80SY3 350 aa12.28□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 Ppme1Q8BVQ5 386 aa12.28□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 Zbtb49Q8BXX2 756 aa12.28□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 Ces1Q8VCC2 565 aa12.28□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 Scyl1Q9EQC5 806 aaKnown RBP12.28□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 BcamQ9R069 622 aa12.28□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 Kcnma1Q08460 1209 aa12.27□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 MycbpapQ5SUV2 932 aa12.27□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Celf6Q7TN33 460 aaKnown RBP12.27□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Usp1Q8BJQ2 784 aa12.27□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Tmem220Q8BP07 167 aa12.27□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Ephx1Q9D379 455 aa12.27□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Actn2Q9JI91 894 aa12.27□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Cdc45Q9Z1X9 566 aa12.27□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Abcb11Q9QY30 1321 aa12.27□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Scn5aQ9JJV9 2019 aa12.27□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Ccdc173A0JLY1 547 aa12.26□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Map7d2A2AG50 781 aa12.26□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Pfkfb3A7UAK5 555 aa12.26□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 CcnoP0C242 352 aa12.26□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Gm21985Q6P6P5 1106 aa12.26□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Olfr538Q7TRT5 310 aa12.26□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Ncaph2Q8BSP2 607 aa12.26□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 CnstQ8CBC4 711 aa12.26□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 TraipQ8VIG6 470 aa12.26□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 NptxrQ99J85 493 aa12.26□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 4933402E13RikQ9D4D2 429 aa12.26□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Fbxo17Q9QZM8 286 aa12.26□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Morc1Q9WVL5 950 aa12.26□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Mtmr1Q9Z2C4 669 aa12.26□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Nme9A0A1L1SUL6 329 aa12.26□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Gm38392E9Q2A2 434 aa12.26□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Dnm2P39054 870 aaKnown RBP12.26□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Tarbp2P97473 365 aa12.26□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Serpinb3dQ6UKZ0 387 aa12.26□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Shc2Q8BMC3 573 aa12.26□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Vps52Q8C754 723 aaKnown RBP12.26□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Vopp1Q8R1C3 172 aa12.26□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Cog6Q8R3I3 657 aa12.26□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Cabp7Q91ZM8 215 aa12.26□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Kctd10Q922M3 315 aa12.26□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Spdl1Q923A2 608 aa12.26□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Ranbp17Q99NF8 1088 aa12.26□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Zfp236S4R299 1847 aa12.26□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 SprtnG3X912 497 aa12.25□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Hoxc13P50207 328 aa12.25□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Nudt1P53368 156 aa12.25□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Pbxip1Q3TVI8 727 aa12.25□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Ckap2Q3V1H1 664 aa12.25□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Hsf5Q5ND04 624 aa12.25□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 PodnQ7TQ62 611 aa12.25□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Tbc1d5Q80XQ2 815 aa12.25□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Fam160b1Q8CDM8 764 aa12.25□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Unc93b1Q8VCW4 598 aa12.25□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 CrygnQ8VHL5 183 aa12.25□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Nmnat1Q9EPA7 285 aa12.25□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Ubxn8Q9QZ49 277 aa12.25□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Clk2O35491 499 aa12.25□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Hoxd12P23812 268 aa12.25□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Mark2Q05512 776 aa12.25□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Pgap2Q3TQR0 254 aa12.25□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Mpzl3Q3V3F6 237 aa12.25□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Slc9a2Q3ZAS0 814 aa12.25□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Znf827Q505G8 1078 aa12.25□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Gm14851Q5ERJ0 116 aa12.25□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Tmem164Q6PHN7 296 aa12.25□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Ttc39bQ8BYY4 617 aa12.25□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Cntn6Q9JMB8 1028 aa12.25□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Gm11239E9Q5Z9 360 aa12.24□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Gm11237F2Z3W5 360 aa12.24□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Gm11238F2Z478 360 aa12.24□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Vmn2r111K7N674 857 aa12.24□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Cyp26a1O55127 497 aa12.24□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Psmc3O88685 442 aa12.24□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Xrcc6P23475 608 aa12.24□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 TdgP56581 421 aa12.24□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Exosc10P56960 887 aaKnown RBP12.24□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Pcbp1P60335 356 aaKnown RBP12.24□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Perm1Q149B8 807 aa12.24□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Snx27Q3UHD6 539 aa12.24□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Gm428Q3UTE2 360 aa12.24□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Krt9Q6RHW0 743 aa12.24□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Ehd2Q8BH64 543 aa12.24□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Olfr1352Q8VGX5 309 aa12.24□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Dph6Q9CQ28 267 aa12.24□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Cep89Q9CZX2 791 aa12.24□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Noxred1Q9D3S5 366 aa12.24□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Lman2Q9DBH5 358 aaKnown RBP12.24□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Pes1Q9EQ61 584 aaKnown RBP12.24□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Tnrc18Q80WC3 2878 aa12.24□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Nlgn4lB0F2B4 945 aa12.23□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Cisd3B1AR13 137 aa12.23□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 PrkceP16054 737 aa12.23□□□□□ -0.45
Ccdc60-202ENSMUST00000086483 Mmp3P28862 477 aa12.23□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 34.4 ms