RNA–Protein interactions for RNA: ENSMUST00000080461.11

Lig3-202, Transcript of DNA ligase 3, mousemouse

TSL 5 BASIC

Gene Lig3, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-202ENSMUST00000080461 Iqcb1Q8BP00 598 aa13.55□□□□□ -0.24
Lig3-202ENSMUST00000080461 AagabQ8R2R3 316 aa13.55□□□□□ -0.24
Lig3-202ENSMUST00000080461 Ipo7Q9EPL8 1038 aaKnown RBP13.55□□□□□ -0.24
Lig3-202ENSMUST00000080461 Prg3Q9JL95 222 aa13.55□□□□□ -0.24
Lig3-202ENSMUST00000080461 RptorQ8K4Q0 1335 aa13.55□□□□□ -0.24
Lig3-202ENSMUST00000080461 Col4a3Q9QZS0 1669 aa13.55□□□□□ -0.24
Lig3-202ENSMUST00000080461 Guca2bO09051 106 aa13.55□□□□□ -0.24
Lig3-202ENSMUST00000080461 Nr1i3O35627 358 aa13.55□□□□□ -0.24
Lig3-202ENSMUST00000080461 PrkceP16054 737 aa13.55□□□□□ -0.24
Lig3-202ENSMUST00000080461 Gtf2bP62915 316 aa13.55□□□□□ -0.24
Lig3-202ENSMUST00000080461 Frmd8Q3UFK8 466 aa13.55□□□□□ -0.24
Lig3-202ENSMUST00000080461 Rapgef1Q3UHC1 1224 aa13.55□□□□□ -0.24
Lig3-202ENSMUST00000080461 Sema4bQ62179 823 aa13.55□□□□□ -0.24
Lig3-202ENSMUST00000080461 Ces1eQ64176 562 aa13.55□□□□□ -0.24
Lig3-202ENSMUST00000080461 Slain1Q68FF7 579 aa13.55□□□□□ -0.24
Lig3-202ENSMUST00000080461 Gpr180Q8BPS4 441 aa13.55□□□□□ -0.24
Lig3-202ENSMUST00000080461 SucoQ8C341 1250 aa13.55□□□□□ -0.24
Lig3-202ENSMUST00000080461 Btbd7Q8CFE5 1130 aa13.55□□□□□ -0.24
Lig3-202ENSMUST00000080461 Stap2Q8R0L1 411 aa13.55□□□□□ -0.24
Lig3-202ENSMUST00000080461 NapgQ9CWZ7 312 aa13.55□□□□□ -0.24
Lig3-202ENSMUST00000080461 Slfn14V9GXG1 899 aa13.55□□□□□ -0.24
Lig3-202ENSMUST00000080461 Abcb11Q9QY30 1321 aa13.55□□□□□ -0.24
Lig3-202ENSMUST00000080461 Arhgef10lA2AWP8 1280 aa13.54□□□□□ -0.24
Lig3-202ENSMUST00000080461 Nfatc2ipO09130 412 aa13.54□□□□□ -0.24
Lig3-202ENSMUST00000080461 LbrQ3U9G9 626 aaKnown RBP13.54□□□□□ -0.24
Lig3-202ENSMUST00000080461 A1cfQ5YD48 595 aa13.54□□□□□ -0.24
Lig3-202ENSMUST00000080461 Pacsin1Q61644 441 aa13.54□□□□□ -0.24
Lig3-202ENSMUST00000080461 Serpinb3dQ6UKZ0 387 aa13.54□□□□□ -0.24
Lig3-202ENSMUST00000080461 3830417A13RikQ8BQJ2 303 aa13.54□□□□□ -0.24
Lig3-202ENSMUST00000080461 Klhl20Q8VCK5 604 aa13.54□□□□□ -0.24
Lig3-202ENSMUST00000080461 CbsQ91WT9 561 aa13.54□□□□□ -0.24
Lig3-202ENSMUST00000080461 Rpn1Q91YQ5 608 aaKnown RBP13.54□□□□□ -0.24
Lig3-202ENSMUST00000080461 Smc1bQ920F6 1248 aa13.54□□□□□ -0.24
Lig3-202ENSMUST00000080461 Nudt5Q9JKX6 218 aa13.54□□□□□ -0.24
Lig3-202ENSMUST00000080461 Hnrnph3D3Z3N4 346 aaKnown RBP13.54□□□□□ -0.24
Lig3-202ENSMUST00000080461 Lrrc4bP0C192 709 aa13.54□□□□□ -0.24
Lig3-202ENSMUST00000080461 Mcl1P97287 331 aa13.54□□□□□ -0.24
Lig3-202ENSMUST00000080461 SelpQ01102 768 aa13.54□□□□□ -0.24
Lig3-202ENSMUST00000080461 IbspQ61711 324 aa13.54□□□□□ -0.24
Lig3-202ENSMUST00000080461 Zcchc18Q8VD24 393 aa13.54□□□□□ -0.24
Lig3-202ENSMUST00000080461 Rrp1bQ91YK2 724 aaKnown RBP13.54□□□□□ -0.24
Lig3-202ENSMUST00000080461 Ctu1Q99J10 420 aa13.54□□□□□ -0.24
Lig3-202ENSMUST00000080461 Sh2b2Q9JID9 621 aa13.54□□□□□ -0.24
Lig3-202ENSMUST00000080461 Celf2Q9Z0H4 508 aaKnown RBP13.54□□□□□ -0.24
Lig3-202ENSMUST00000080461 AW822073A0A0N4SUK1 652 aa13.53□□□□□ -0.24
Lig3-202ENSMUST00000080461 Gm11549A0A286YD83 63 aa13.53□□□□□ -0.24
Lig3-202ENSMUST00000080461 Mmp15O54732 657 aa13.53□□□□□ -0.24
Lig3-202ENSMUST00000080461 Spryd7Q3TFQ1 196 aa13.53□□□□□ -0.24
Lig3-202ENSMUST00000080461 Dpcr1Q3TNW5 500 aa13.53□□□□□ -0.24
Lig3-202ENSMUST00000080461 Ece1Q4PZA2 769 aa13.53□□□□□ -0.24
Lig3-202ENSMUST00000080461 Xpnpep1Q6P1B1 623 aa13.53□□□□□ -0.24
Lig3-202ENSMUST00000080461 Lrrn2Q6PHP6 730 aa13.53□□□□□ -0.24
Lig3-202ENSMUST00000080461 Mcph1Q7TT79 822 aa13.53□□□□□ -0.24
Lig3-202ENSMUST00000080461 Cdc23Q8BGZ4 597 aa13.53□□□□□ -0.24
Lig3-202ENSMUST00000080461 Iws1Q8C1D8 766 aa13.53□□□□□ -0.24
Lig3-202ENSMUST00000080461 Ppfibp1Q8C8U0 969 aaKnown RBP13.53□□□□□ -0.24
Lig3-202ENSMUST00000080461 Cdk17Q8K0D0 523 aa13.53□□□□□ -0.24
Lig3-202ENSMUST00000080461 Tspan8Q8R3G9 235 aa13.53□□□□□ -0.24
Lig3-202ENSMUST00000080461 Vwa5aQ99KC8 793 aaKnown RBP13.53□□□□□ -0.24
Lig3-202ENSMUST00000080461 Q9CYI0 393 aa13.53□□□□□ -0.24
Lig3-202ENSMUST00000080461 4931423N10RikQ9D4J9 382 aa13.53□□□□□ -0.24
Lig3-202ENSMUST00000080461 Taf4bG5E8Z2 855 aa13.53□□□□□ -0.24
Lig3-202ENSMUST00000080461 Pgrmc1O55022 195 aa13.53□□□□□ -0.24
Lig3-202ENSMUST00000080461 Axin2O88566 840 aa13.53□□□□□ -0.24
Lig3-202ENSMUST00000080461 Casp7P97864 303 aa13.53□□□□□ -0.24
Lig3-202ENSMUST00000080461 Tlr11Q6R5P0 926 aa13.53□□□□□ -0.24
Lig3-202ENSMUST00000080461 Hook2Q7TMK6 716 aa13.53□□□□□ -0.24
Lig3-202ENSMUST00000080461 Dusp4Q8BFV3 398 aa13.53□□□□□ -0.24
Lig3-202ENSMUST00000080461 Reep2Q8VCD6 254 aa13.53□□□□□ -0.24
Lig3-202ENSMUST00000080461 Ddx39aQ8VDW0 427 aaKnown RBP13.53□□□□□ -0.24
Lig3-202ENSMUST00000080461 Ddx41Q91VN6 622 aaKnown RBP13.53□□□□□ -0.24
Lig3-202ENSMUST00000080461 Golph3Q9CRA5 298 aa13.53□□□□□ -0.24
Lig3-202ENSMUST00000080461 Erp44Q9D1Q6 406 aa13.53□□□□□ -0.24
Lig3-202ENSMUST00000080461 Prl2b1Q9DAZ2 228 aa13.53□□□□□ -0.24
Lig3-202ENSMUST00000080461 Gimap9G3X987 291 aa13.53□□□□□ -0.24
Lig3-202ENSMUST00000080461 Prom1O54990 867 aa13.53□□□□□ -0.24
Lig3-202ENSMUST00000080461 Mov10P23249 1004 aaKnown RBP13.53□□□□□ -0.24
Lig3-202ENSMUST00000080461 Ccnd2P30280 289 aa13.53□□□□□ -0.24
Lig3-202ENSMUST00000080461 Morf4l1P60762 362 aa13.53□□□□□ -0.24
Lig3-202ENSMUST00000080461 BC051142Q3V0M8 400 aa13.53□□□□□ -0.24
Lig3-202ENSMUST00000080461 NntQ61941 1086 aaKnown RBP13.53□□□□□ -0.24
Lig3-202ENSMUST00000080461 Ctnna3Q65CL1 895 aa13.53□□□□□ -0.24
Lig3-202ENSMUST00000080461 Gba2Q69ZF3 918 aa13.53□□□□□ -0.24
Lig3-202ENSMUST00000080461 Spag5Q7TME2 1165 aa13.53□□□□□ -0.24
Lig3-202ENSMUST00000080461 Q8BGN9 141 aa13.53□□□□□ -0.24
Lig3-202ENSMUST00000080461 Med15Q924H2 789 aa13.53□□□□□ -0.24
Lig3-202ENSMUST00000080461 Cyth3O08967 399 aa13.52□□□□□ -0.24
Lig3-202ENSMUST00000080461 Pla2g4aP47713 748 aa13.52□□□□□ -0.24
Lig3-202ENSMUST00000080461 Gad1P48318 593 aa13.52□□□□□ -0.24
Lig3-202ENSMUST00000080461 GclcP97494 637 aa13.52□□□□□ -0.24
Lig3-202ENSMUST00000080461 Dlg4Q62108 724 aa13.52□□□□□ -0.24
Lig3-202ENSMUST00000080461 Irak1Q62406 710 aa13.52□□□□□ -0.24
Lig3-202ENSMUST00000080461 WhrnQ80VW5 918 aa13.52□□□□□ -0.24
Lig3-202ENSMUST00000080461 Eif3cQ8R1B4 911 aaKnown RBP13.52□□□□□ -0.24
Lig3-202ENSMUST00000080461 Slc15a2Q9ES07 729 aa13.52□□□□□ -0.24
Lig3-202ENSMUST00000080461 4930544D05RikJ3QK56 214 aa13.52□□□□□ -0.25
Lig3-202ENSMUST00000080461 Irf8P23611 424 aa13.52□□□□□ -0.25
Lig3-202ENSMUST00000080461 Gna15P30678 374 aa13.52□□□□□ -0.25
Lig3-202ENSMUST00000080461 SnrpfP62307 86 aaKnown RBP13.52□□□□□ -0.25
Lig3-202ENSMUST00000080461 Ano9P86044 747 aa13.52□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 28.3 ms