RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Cfap57Q9D180 1249 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Cse1lQ9ERK4 971 aaKnown RBP10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Fmnl1Q9JL26 1094 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Cabp5Q9JLK3 173 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Klc1O88447 541 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Idh1O88844 414 aaKnown RBP10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Ephb4P54761 987 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Rgs9bpQ148R9 237 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Ccdc92bQ5SUE3 299 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Adad1Q5SUE7 619 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Grik5Q61626 979 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Ankrd13dQ6PD24 605 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 TbataQ7TSD4 393 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Cnot10Q8BH15 744 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Vps52Q8C754 723 aaKnown RBP10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Ccdc134Q8C7V8 229 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Gramd4Q8CB44 633 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Slf1Q8R3P9 1054 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Ranbp17Q99NF8 1088 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Rasgef1cQ9D300 466 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Cpne8Q9DC53 577 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Znf354bQ9QXT9 601 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Cacna2d3Q9Z1L5 1091 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Scn9aQ62205 1984 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Parp2O88554 559 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Il13ra2O88786 383 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Mgat1P27808 447 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Irx1P81068 480 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Klrg2Q3UM83 387 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Drc1Q3USS3 753 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 1810065E05RikQ5NC41 235 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Brip1Q5SXJ3 1174 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 StilQ60988 1262 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Msl1Q6PDM1 616 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Phf20Q8BLG0 1010 aaKnown RBP10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Rint1Q8BZ36 792 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 MslnlQ8C160 685 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Riox2Q8CD15 465 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Tesk2Q8VCT9 570 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Mageb16Q9CWV4 363 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Lman1Q9D0F3 517 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Gpihbp1Q9D1N2 228 aa10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Ddx20Q9JJY4 825 aaKnown RBP10.61□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Usp31E9Q6Y8 1344 aa10.6□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 1700018F24RikB2RW27 314 aa10.6□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Gm3127E9Q9P5 263 aa10.6□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Usp17lbE9Q9U0 468 aa10.6□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Gm3453K7N724 263 aa10.6□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Adam7O35227 789 aa10.6□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Tagap1P0CAX8 505 aa10.6□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 OatP29758 439 aa10.6□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Cep126Q0VBV7 1103 aa10.6□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 YdjcQ14BV6 310 aa10.6□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Serpinb6Q60854 378 aa10.6□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 CrkQ64010 304 aa10.6□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Fgfr1opQ66JX5 399 aa10.6□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Ssxb10Q6XAR7 170 aa10.6□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Nucks1Q80XU3 234 aaKnown RBP10.6□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Ago4Q8CJF8 861 aa10.6□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Dennd1aQ8K382 1016 aa10.6□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Eya4Q9Z191 616 aa10.6□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Q3TTJ4 293 aa10.6□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Znf354cQ571J5 560 aa10.6□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Dph1Q5NCQ5 438 aa10.6□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Tmc4Q7TQ65 694 aa10.6□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Tas2r134Q7TQB0 298 aa10.6□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Gm5622Q810Q0 167 aa10.6□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Depdc1bQ8BH88 529 aa10.6□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Tmx4Q8C0L0 335 aa10.6□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Acat1Q8QZT1 424 aa10.6□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Pcdhgb4Q91XX6 912 aa10.6□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Ergic2Q9CR89 377 aa10.6□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Gm8994E9PV04 411 aaKnown RBP10.59□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Stk10O55098 966 aa10.59□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Etv6P97360 485 aa10.59□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Dlg4Q62108 724 aa10.59□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Zbtb7bQ64321 544 aa10.59□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Atp2b4Q6Q477 1205 aa10.59□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 SpidrQ8BGX7 933 aa10.59□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Calhm4Q8CE93 315 aa10.59□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 SfpqQ8VIJ6 699 aaKnown RBP10.59□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Zmynd10Q99ML0 440 aa10.59□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 IvdQ9JHI5 424 aa10.59□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Flvcr1B2RXV4 560 aa10.59□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 PtenO08586 403 aa10.59□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 GssP51855 474 aa10.59□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Ncf1Q09014 390 aa10.59□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Zfp957Q3UT76 567 aa10.59□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Ndufaf2Q59J78 168 aa10.59□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Ugt1a9Q62452 528 aa10.59□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Xlr3bQ6P205 226 aa10.59□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Sh3d21Q7TSG5 549 aa10.59□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Rnaseh2bQ80ZV0 308 aa10.59□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Cyp26b1Q811W2 512 aa10.59□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Snx14Q8BHY8 964 aa10.59□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Taok3Q8BYC6 898 aa10.59□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Kat5Q8CHK4 513 aa10.59□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Slc14a1Q8VHL0 384 aa10.59□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Pdxdc1Q99K01 787 aaKnown RBP10.59□□□□□ -0.71
Ccdc40-202ENSMUST00000053440 Spc24Q9D083 201 aa10.59□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 17.2 ms