RNA–Protein interactions for RNA: ENSMUST00000028769.12

Ptpra-201, Transcript of Receptor-type tyrosine-protein phosphatase alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptpra, Length 3,227 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpra-201ENSMUST00000028769 Osbpl9A2A8Z1 736 aa19.31■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Best3Q6H1V1 669 aa19.31■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Peg10Q7TN75 958 aaKnown RBP19.31■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Micall1Q8BGT6 870 aa19.31■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Unc5bQ8K1S3 945 aa19.31■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Bst2Q8R2Q8 172 aa19.31■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Ddx31Q6NZQ2 687 aaKnown RBP19.3■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Trim65Q8BFW4 522 aa19.3■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Gm8994E9PV04 411 aaKnown RBP19.3■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Gm6121L7MUF1 212 aa19.3■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Pik3caP42337 1068 aa19.3■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Kcnt1Q6ZPR4 1224 aa19.3■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Pabpc6Q9D4E6 643 aaKnown RBP19.3■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Nr1i3O35627 358 aa19.3■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Nedd1P33215 660 aa19.3■□□□□ 0.68
Ptpra-201ENSMUST00000028769 4930502E18RikQ14BQ3 236 aa19.3■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Agxt2Q3UEG6 513 aa19.3■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Nell2Q61220 819 aa19.3■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Ssxb10Q6XAR7 170 aa19.3■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Epn2Q8CHU3 595 aa19.3■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Eif3hQ91WK2 352 aaKnown RBP19.3■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Trap1Q9CQN1 706 aaKnown RBP19.3■□□□□ 0.68
Ptpra-201ENSMUST00000028769 4930449I24RikQ9D5E3 319 aa19.3■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Fthl17aQ9DAX0 182 aa19.3■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Col5a2Q3U962 1497 aa19.29■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Olfr247E9PVJ7 320 aa19.29■□□□□ 0.68
Ptpra-201ENSMUST00000028769 4930523C07RikE9Q2T4 99 aa19.29■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Usp17ldG5E8G2 545 aa19.29■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Usp17lcG5E8I7 545 aa19.29■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Olfr819K7N727 320 aa19.29■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Epb41l4aP52963 686 aa19.29■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Fam198bQ3UPI1 517 aa19.29■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Atp13a3Q5XF89 1219 aa19.29■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Ccdc28aQ8CEI3 192 aa19.29■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Cbwd1Q8VEH6 393 aa19.29■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Tsc2Q61037 1814 aa19.29■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Fam171a1A2ATK9 892 aa19.29■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Scgb2b7D3YYY1 112 aa19.29■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Gm10110D3Z5M2 615 aa19.29■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Art2bO35975 289 aa19.29■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Klra4Q60651 263 aa19.29■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Nop53Q8BK35 484 aaKnown RBP19.29■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Ptrh1Q8BW00 204 aa19.29■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Spats2Q8K1N4 545 aaKnown RBP19.29■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Atp6v0a4Q920R6 833 aa19.29■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Eya4Q9Z191 616 aa19.29■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Mdm4O35618 489 aa19.29■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Pja1O55176 578 aa19.29■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Map2k1P31938 393 aa19.29■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Col9a2Q07643 688 aa19.29■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Drc1Q3USS3 753 aa19.29■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Zfp957Q3UT76 567 aa19.29■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Ddx49Q4FZF3 480 aaKnown RBP19.29■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Sin3bQ62141 1098 aa19.29■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Ttc7aQ8BGB2 858 aa19.29■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Sept3Q9Z1S5 350 aa19.29■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Senp1P59110 640 aa19.28■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Fgfr4Q03142 799 aa19.28■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Med24Q99K74 987 aa19.28■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Psma8Q9CWH6 250 aa19.28■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Klc4Q9DBS5 619 aa19.28■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Fmnl1Q9JL26 1094 aa19.28■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Entpd5Q9WUZ9 427 aa19.28■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Usp4P35123 962 aa19.28■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Adcy7P51829 1099 aa19.28■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Lig3P97386 1015 aa19.28■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Mcf2lQ64096 1149 aa19.28■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Pym1Q8CHP5 203 aaKnown RBP19.28■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Gprc5cQ8K3J9 440 aa19.28■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Slc18a1Q8R090 521 aa19.28■□□□□ 0.68
Ptpra-201ENSMUST00000028769 TyrobpO54885 114 aa19.27■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Ercc5P35689 1170 aa19.27■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Sfi1Q3UZY0 1216 aaKnown RBP19.27■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Znf354cQ571J5 560 aa19.27■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Nucks1Q80XU3 234 aaKnown RBP19.27■□□□□ 0.68
Ptpra-201ENSMUST00000028769 PaoxQ8C0L6 504 aa19.27■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Sdr42e1Q9D665 394 aa19.27■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Ccdc92bQ5SUE3 299 aa19.27■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Cpa5Q8R4H4 436 aa19.27■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Msantd4Q91YU3 345 aa19.27■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Q9DAQ4 598 aa19.27■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Slc26a4Q9R155 780 aa19.27■□□□□ 0.68
Ptpra-201ENSMUST00000028769 Slc6a16A0A1L1SR47 742 aa19.27■□□□□ 0.67
Ptpra-201ENSMUST00000028769 Eftud2O08810 971 aaKnown RBP19.27■□□□□ 0.67
Ptpra-201ENSMUST00000028769 Phf20Q8BLG0 1010 aaKnown RBP19.27■□□□□ 0.67
Ptpra-201ENSMUST00000028769 Reep2Q8VCD6 254 aa19.27■□□□□ 0.67
Ptpra-201ENSMUST00000028769 Usp29Q9ES63 869 aa19.27■□□□□ 0.67
Ptpra-201ENSMUST00000028769 Krt19P19001 403 aa19.26■□□□□ 0.67
Ptpra-201ENSMUST00000028769 Q32P12 615 aa19.26■□□□□ 0.67
Ptpra-201ENSMUST00000028769 Fbxw10Q5SUS0 1030 aa19.26■□□□□ 0.67
Ptpra-201ENSMUST00000028769 Ano5Q75UR0 904 aa19.26■□□□□ 0.67
Ptpra-201ENSMUST00000028769 Rapgef5Q8C0Q9 814 aa19.26■□□□□ 0.67
Ptpra-201ENSMUST00000028769 Nup58Q8R332 587 aa19.26■□□□□ 0.67
Ptpra-201ENSMUST00000028769 Lrrc14Q8VC16 493 aa19.26■□□□□ 0.67
Ptpra-201ENSMUST00000028769 Cfap57Q9D180 1249 aa19.26■□□□□ 0.67
Ptpra-201ENSMUST00000028769 Col1a1P11087 1453 aa19.26■□□□□ 0.67
Ptpra-201ENSMUST00000028769 Fyb2A2A995 729 aa19.26■□□□□ 0.67
Ptpra-201ENSMUST00000028769 Cyth3O08967 399 aa19.26■□□□□ 0.67
Ptpra-201ENSMUST00000028769 Adam7O35227 789 aa19.26■□□□□ 0.67
Ptpra-201ENSMUST00000028769 Ppp3caP63328 521 aa19.26■□□□□ 0.67
Retrieved 100 of 22,080 RNA–protein pairs in 40.8 ms