RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 ToporslQ9D2F8 683 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Dnajc7Q9QYI3 494 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Tk2Q9R088 270 aa10.82□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Phc1Q64028 1012 aa10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Rhot1Q8BG51 631 aa10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 BlmhQ8R016 455 aa10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Rpa1Q8VEE4 623 aaKnown RBP10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 HnmtQ91VF2 295 aa10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Txndc9Q9CQ79 226 aa10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Trap1Q9CQN1 706 aaKnown RBP10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Cmtr1Q9DBC3 837 aa10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Gm7942L7N277 499 aa10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Usp4P35123 962 aa10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Tmod1P49813 359 aa10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Sesn2P58043 480 aa10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Trim43bP86448 445 aa10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Spata18Q0P557 537 aa10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 CenpuQ8C4M7 410 aa10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Trim9Q8C7M3 817 aa10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Rmnd1Q8CI78 450 aa10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 IscuQ9D7P6 168 aa10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Synj2Q9D2G5 1434 aa10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Pdzd8B9EJ80 1147 aa10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Tada2bD3Z4Z0 420 aaKnown RBP10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Zmynd10Q99ML0 440 aa10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Gins2Q9D600 185 aa10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Caln1Q9JJG7 219 aa10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Arl4aP61213 200 aa10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Ece1Q4PZA2 769 aa10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Tlr11Q6R5P0 926 aa10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Ankzf1Q80UU1 748 aaKnown RBP10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 OtoaQ8K561 1137 aa10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Cacnb1Q8R3Z5 597 aa10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Prpf6Q91YR7 941 aaKnown RBP10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Plagl2Q925T4 496 aa10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Axin2O88566 840 aa10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 GabrdP22933 449 aa10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Lig1P37913 916 aa10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Hps5P59438 1126 aa10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Klhdc10Q6PAR0 439 aa10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Thoc1Q8R3N6 657 aaKnown RBP10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Chn1Q91V57 459 aa10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 AW822073A0A0N4SUK1 652 aa10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Slc39a2G3X943 309 aa10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 DnttP09838 530 aa10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Hspa9P38647 679 aaKnown RBP10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Wee1P47810 646 aa10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 RubcnlQ3TD16 648 aa10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Agap2Q3UHD9 1186 aa10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Tpp2Q64514 1262 aa10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Gprasp2Q8BUY8 826 aa10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Med15Q924H2 789 aa10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Krt27Q9Z320 448 aa10.81□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Gm5795E9PZN8 263 aa10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Tmem120bQ3TA38 339 aa10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Mageb18Q8BQR7 327 aa10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Nrbp2Q91V36 499 aa10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Cse1lQ9ERK4 971 aaKnown RBP10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Pabpc1lA2A5N3 607 aaKnown RBP10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Hipk4Q3V016 616 aa10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Tmco6Q8BQX5 494 aa10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Gimap5Q8BWF2 308 aa10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Usp33Q8R5K2 909 aa10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Tmed5Q9CXE7 229 aa10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Tmed10Q9D1D4 219 aaKnown RBP10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Drap1Q9D6N5 205 aa10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Kcnq5Q9JK45 933 aa10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Parp3Q3ULW8 533 aa10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Arhgef9Q3UTH8 516 aa10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Carmil2Q3V3V9 1296 aa10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Eps8l1Q8R5F8 716 aa10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Frmd4bQ920B0 1035 aa10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Ino80Q6ZPV2 1559 aa10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Prdm11A2AGX3 565 aa10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Krt10P02535 570 aa10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Trmt10cQ3UFY8 414 aaKnown RBP10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Znf598Q80YR4 908 aaKnown RBP10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 4932411N23RikQ8C0S0 470 aa10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Tmem120aQ8C1E7 343 aa10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Sugp2Q8CH09 1067 aa10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 TarsQ9D0R2 722 aaKnown RBP10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Iqcf1Q9D9K8 182 aa10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 PodxlQ9R0M4 503 aa10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Chek2Q9Z265 546 aa10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Chil3O35744 398 aa10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Dynlt1P51807 113 aa10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Ifnl2Q4VK74 193 aa10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Asap3Q5U464 904 aa10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 N4bp3Q8C7U1 537 aa10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Klhl2Q8JZP3 593 aa10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Gps1Q99LD4 471 aaKnown RBP10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Tmem206Q9D771 350 aa10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Klra10Q9R1G6 266 aa10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Arhgef10lA2AWP8 1280 aa10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Gm379J3QQ19 296 aa10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Wdr36Q3TAQ9 899 aaKnown RBP10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Sin3bQ62141 1098 aa10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 Msl1Q6PDM1 616 aa10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 TxlngQ8BHN1 524 aa10.8□□□□□ -0.68
Ubr1-201ENSMUST00000028728 IcoslgQ9JHJ8 322 aa10.8□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 24.9 ms