RNA–Protein interactions for RNA: ENSMUST00000026740.5

Col7a1-201, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col7a1, Length 9,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-201ENSMUST00000026740 TnnQ80Z71 1560 aa15.32■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Cdk9Q99J95 372 aa15.32■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Klhl28Q9CR40 571 aa15.32■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Gm20911A0A087WSS0 222 aa15.32■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Kcna1P16388 495 aa15.32■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Cyth2P63034 400 aaKnown RBP15.32■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Prpf6Q91YR7 941 aaKnown RBP15.32■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Pdia6Q922R8 440 aaKnown RBP15.32■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Pik3r1P26450 724 aa15.32■□□□□ 0.04
Col7a1-201ENSMUST00000026740 BegainQ68EF6 600 aa15.32■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Krt72Q6IME9 520 aa15.32■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Rundc3bQ6PDC0 408 aa15.32■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Moxd2Q7TT41 619 aa15.32■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Atp1a1Q8VDN2 1023 aaKnown RBP15.32■□□□□ 0.04
Col7a1-201ENSMUST00000026740 PrimpolQ6P1E7 537 aa15.32■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Sgsm1Q8BPQ7 1093 aa15.32■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Ap3m2Q8R2R9 418 aa15.32■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Twf2Q9Z0P5 349 aaKnown RBP15.32■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Mif4gdQ3UBZ5 222 aa15.31■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Zfp212G3X8R7 492 aa15.31■□□□□ 0.04
Col7a1-201ENSMUST00000026740 PighQ5M9N4 188 aa15.31■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Fsd1lQ8BYN5 507 aa15.31■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Cgref1Q8R1U2 281 aa15.31■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Ubxn8Q9QZ49 277 aa15.31■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Ppp3ccP48455 513 aa15.31■□□□□ 0.04
Col7a1-201ENSMUST00000026740 CiitaP79621 1155 aa15.31■□□□□ 0.04
Col7a1-201ENSMUST00000026740 GypcQ78HU7 95 aa15.31■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Nup85Q8R480 656 aaKnown RBP15.31■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Apopt1Q9CQW7 192 aa15.31■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Rgs22G3UYX5 1258 aa15.31■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Vps72Q62481 368 aa15.31■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Ppp2r2aQ6P1F6 447 aa15.31■□□□□ 0.04
Col7a1-201ENSMUST00000026740 EmsyQ8BMB0 1264 aaKnown RBP15.31■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Cdc27A2A6Q5 825 aa15.31■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Arhgap6O54834 987 aa15.31■□□□□ 0.04
Col7a1-201ENSMUST00000026740 GssP51855 474 aa15.31■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Rrp36Q3UFY0 244 aaKnown RBP15.31■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Gpbp1l1Q6NZP2 473 aa15.31■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Atp6v0d2Q80SY3 350 aa15.31■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Armc6Q8BNU0 468 aa15.31■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Adgrb2Q8CGM1 1561 aa15.31■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Hacd3Q8K2C9 362 aa15.31■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Ndst4Q9EQW8 872 aa15.31■□□□□ 0.04
Col7a1-201ENSMUST00000026740 LratQ9JI60 231 aa15.31■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Gpaa1Q9WTK3 621 aa15.31■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Cep126Q0VBV7 1103 aa15.31■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Ano5Q75UR0 904 aa15.31■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Spag7Q7TNE3 227 aaKnown RBP15.31■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Pomgnt2Q8BW41 605 aa15.31■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Zfp113Q8C689 439 aa15.31■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Dclre1bQ8C7W7 541 aa15.31■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Rnf8Q8VC56 488 aa15.31■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Ddx25Q9QY15 484 aa15.31■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Klhl34A2AI76 644 aa15.31■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Csn1s1P19228 313 aa15.31■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Ddit3P35639 168 aa15.31■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Casp4P70343 373 aa15.31■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Gabpb1Q00420 383 aa15.31■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Ireb2Q811J3 963 aaKnown RBP15.31■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Eif4a3Q91VC3 411 aaKnown RBP15.31■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Slc4a1P04919 929 aa15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Stat5bP42232 786 aa15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Ccdc85bQ6PDY0 202 aa15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Unc45bQ8CGY6 931 aaKnown RBP15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 NclnQ8VCM8 563 aaKnown RBP15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Homer3Q99JP6 356 aa15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 PudpQ9D5U5 234 aa15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Gtf2iQ9ESZ8 998 aaKnown RBP15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Ube4aE9Q735 1028 aa15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Cd3dP04235 173 aa15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Pla2g4aP47713 748 aa15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Stkld1Q80YS9 662 aa15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Apol6B7ZC55 329 aa15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Samsn1P57725 372 aa15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Hspa1aQ61696 641 aa15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Krt39Q6IFX4 482 aa15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Sarm1Q6PDS3 724 aa15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Vmn1r214Q8R279 367 aa15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Upb1Q8VC97 393 aa15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 HdlbpQ8VDJ3 1268 aaKnown RBP15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Hic1Q9R1Y5 733 aa15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Serpinb6cW4VSP4 379 aa15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Lire1P11260 357 aa15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 HaspinQ9Z0R0 754 aa15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Gm3264L7N2C5 238 aa15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Gsdmc4Q3TR54 480 aa15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Rufy4Q3TYX8 563 aa15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Tnfaip2Q61333 691 aa15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Apol9bQ8C7I4 310 aa15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Apol9aQ8VDU3 310 aa15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Igsf1Q7TQA1 1317 aa15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Nr1i3O35627 358 aa15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Sash1P59808 1230 aa15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Spata21Q8BHW6 681 aa15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Ppm1kQ8BXN7 372 aa15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Usp15Q8R5H1 981 aa15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Stx18Q8VDS8 334 aa15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Zcrb1Q9CZ96 217 aaKnown RBP15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Usp42B2RQC2 1324 aaKnown RBP15.3■□□□□ 0.04
Col7a1-201ENSMUST00000026740 3425401B19RikD3Z1D3 1412 aa15.3■□□□□ 0.04
Retrieved 100 of 22,080 RNA–protein pairs in 18.8 ms