RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Ttc23Q8CHY7 488 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Tasp1Q8R1G1 420 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Fbxw7Q8VBV4 629 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Upb1Q8VC97 393 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Dnajc3Q91YW3 504 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 GatbQ99JT1 557 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Erbb3Q61526 1339 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 E230025N22RikG5E8S3 482 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 FntaQ61239 377 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Fnbp1Q80TY0 616 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Psmd5Q8BJY1 504 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Morc2bQ8C5W4 1022 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Lrrc41Q8K1C9 807 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 PccaQ91ZA3 724 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Dgcr8Q9EQM6 773 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Kif24Q6NWW5 1356 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Pla2r1Q62028 1487 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Gm16430A6X8J1 155 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Gm5926E9PWJ8 236 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Farp1F8VPU2 1048 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Hoxc10P31257 342 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Sept1P42209 366 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Scg3P47867 471 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Tlr7P58681 1050 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 SnrpfP62307 86 aaKnown RBP9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Serpina5P70458 405 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Rnf10Q3UIW5 804 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Rbbp8Q80YR6 893 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Ireb2Q811J3 963 aaKnown RBP9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Strip1Q8C079 837 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Nudcd3Q8R1N4 363 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 FdpsQ920E5 353 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Snx24Q9CRB0 169 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Ilf2Q9CXY6 390 aaKnown RBP9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Chordc1Q9D1P4 331 aaKnown RBP9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Eif4g3Q80XI3 1579 aaKnown RBP9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Cylc2B1AWN8 422 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Zfp839E9PUU5 921 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Impdh2P24547 514 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 GckP52792 465 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Npas2P97460 816 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Stx3Q64704 289 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 PrimpolQ6P1E7 537 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 NostrinQ6WKZ7 506 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Ip6k2Q80V72 448 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Clec4gQ8BNX1 294 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Cdk9Q99J95 372 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Sugt1Q9CX34 336 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 TcimQ9D915 106 aa9.74□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Wdr19Q3UGF1 1341 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Gm3127E9Q9P5 263 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Gm3453K7N724 263 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Efna5O08543 228 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 PtgdrP70263 357 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Rrp36Q3UFY0 244 aaKnown RBP9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Avpr1aQ62463 423 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Utp14bQ6EJB6 756 aaKnown RBP9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Tlr13Q6R5N8 991 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Ccdc151Q8BSN3 593 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Yars2Q8BYL4 472 aaKnown RBP9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Unc45bQ8CGY6 931 aaKnown RBP9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Tcp11l2Q8K1H7 517 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Gpsm2Q8VDU0 679 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Frmd4bQ920B0 1035 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Gm10354K7N6A0 256 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Tsta3P23591 321 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Ulk3Q3U3Q1 472 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Ifnl2Q4VK74 193 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Slc9a1Q61165 820 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Papd5Q68ED3 633 aaKnown RBP9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Baiap3Q80TT2 1134 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Phf20Q8BLG0 1010 aaKnown RBP9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Nlrp4aQ8BU40 982 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Dpp9Q8BVG4 862 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 UvragQ8K245 698 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 LrgukQ9D5S7 820 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Tmod3Q9JHJ0 352 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Cdkl2Q9QUK0 568 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Anapc7Q9WVM3 565 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Adgrb2Q8CGM1 1561 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Itpripl1A2ASA8 547 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Prr5lA2AVJ5 370 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Olfr552E9Q545 317 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Copb2O55029 905 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 PorP37040 678 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Gucy2cQ3UWA6 1072 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Ddx55Q6ZPL9 600 aaKnown RBP9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 CntrobQ8CB62 887 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Tmem63cQ8CBX0 802 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Rmnd1Q8CI78 450 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Lmbrd1Q8K0B2 537 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Tmem134Q8R0J4 195 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Dnajc28Q8VCE1 385 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Zkscan3Q91VW9 553 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 FtcdQ91XD4 541 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 EtfbQ9DCW4 255 aaKnown RBP9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Cpb2Q9JHH6 422 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Fads3Q9JJE7 449 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 Stk32bQ9JJX8 414 aa9.73□□□□□ -0.85
Ccdc47-201ENSMUST00000002043 GdaQ9R111 454 aa9.73□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 19.3 ms