RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR38, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR38snR38 GRH1Q04410 372 aaKnown RBP-1.04□□□□□ -2.58
snR38snR38 MMR1Q06324 491 aa-1.04□□□□□ -2.58
snR38snR38 DCN1Q12395 269 aa-1.04□□□□□ -2.58
snR38snR38 PAB1P04147 577 aaKnown RBP RIP-Chip data-1.05□□□□□ -2.58not detected
snR38snR38 GAL80P04387 435 aa-1.05□□□□□ -2.58
snR38snR38 ATP1P07251 545 aaKnown RBP-1.05□□□□□ -2.58
snR38snR38 RIP1P08067 215 aa-1.05□□□□□ -2.58
snR38snR38 CBS1P14066 229 aa-1.05□□□□□ -2.58
snR38snR38 SLM5P25345 492 aaKnown RBP-1.05□□□□□ -2.58
snR38snR38 RPL16AP26784 199 aaKnown RBP-1.05□□□□□ -2.58
snR38snR38 PTP2P29461 750 aa-1.05□□□□□ -2.58
snR38snR38 MRS6P32864 603 aaKnown RBP-1.05□□□□□ -2.58
snR38snR38 SFC1P33303 322 aa-1.05□□□□□ -2.58
snR38snR38 ZRT3P34240 503 aa-1.05□□□□□ -2.58
snR38snR38 TAE1P38340 232 aa-1.05□□□□□ -2.58
snR38snR38 PAF1P38351 445 aa-1.05□□□□□ -2.58
snR38snR38 UTP25P40498 721 aaKnown RBP-1.05□□□□□ -2.58
snR38snR38 MRPL49P40858 161 aaPredicted RBP-1.05□□□□□ -2.58
snR38snR38 AIM23P47015 356 aa-1.05□□□□□ -2.58
snR38snR38 YGR066CP53242 292 aa-1.05□□□□□ -2.58
snR38snR38 SPR6Q01684 191 aa-1.05□□□□□ -2.58
snR38snR38 MMT1Q03218 510 aa-1.05□□□□□ -2.58
snR38snR38 VID22Q05934 901 aa-1.05□□□□□ -2.58
snR38snR38 HSP42Q12329 375 aa-1.05□□□□□ -2.58
snR38snR38 RPL2AP0CX45 254 aaKnown RBP-1.06□□□□□ -2.58
snR38snR38 RPL2BP0CX46 254 aaKnown RBP-1.06□□□□□ -2.58
snR38snR38 NSP1P14907 823 aaKnown RBP-1.06□□□□□ -2.58
snR38snR38 KAR3P17119 729 aa-1.06□□□□□ -2.58
snR38snR38 VPS1P21576 704 aaKnown RBP-1.06□□□□□ -2.58
snR38snR38 VTC1P40046 129 aaRIP-Chip data-1.06□□□□□ -2.58not detected
snR38snR38 LYS14P40971 790 aa-1.06□□□□□ -2.58
snR38snR38 PIR5P46999 287 aa-1.06□□□□□ -2.58
snR38snR38 YGL118CP53132 145 aa-1.06□□□□□ -2.58
snR38snR38 INP1Q03694 420 aa-1.06□□□□□ -2.58
snR38snR38 SNO4Q04902 237 aa-1.06□□□□□ -2.58
snR38snR38 HSP33Q08914 237 aaKnown RBP-1.06□□□□□ -2.58
snR38snR38 HSP32Q08992 237 aa-1.06□□□□□ -2.58
snR38snR38 YDR018CQ12185 396 aa-1.06□□□□□ -2.58
snR38snR38 BUG1Q12191 341 aa-1.06□□□□□ -2.58
snR38snR38 NOP58Q12499 511 aaKnown RBP-1.06□□□□□ -2.58
snR38snR38 YTA7P40340 1379 aa-1.07□□□□□ -2.58
snR38snR38 VPS63O13549 108 aa-1.07□□□□□ -2.58
snR38snR38 MDH1P17505 334 aaKnown RBP RIP-Chip data-1.07□□□□□ -2.58not detected
snR38snR38 MIR1P23641 311 aaKnown RBP-1.07□□□□□ -2.58
snR38snR38 CHA1P25379 360 aaKnown RBP-1.07□□□□□ -2.58
snR38snR38 YCR102CP25608 368 aa-1.07□□□□□ -2.58
snR38snR38 KRE6P32486 720 aa-1.07□□□□□ -2.58
snR38snR38 SMF2P38778 549 aa-1.07□□□□□ -2.58
snR38snR38 ICE2P40499 491 aa-1.07□□□□□ -2.58
snR38snR38 YGL114WP53134 725 aa-1.07□□□□□ -2.58
snR38snR38 MET14Q02196 202 aa-1.07□□□□□ -2.58
snR38snR38 SVL3Q03088 825 aaKnown RBP-1.07□□□□□ -2.58
snR38snR38 MPD2Q99316 277 aa-1.07□□□□□ -2.58
snR38snR38 GAL1P04385 528 aa-1.08□□□□□ -2.58
snR38snR38 PPH21P23594 369 aa-1.08□□□□□ -2.58
snR38snR38 DOA4P32571 926 aa-1.08□□□□□ -2.58
snR38snR38 CAT2P32796 670 aaKnown RBP-1.08□□□□□ -2.58
snR38snR38 YKL187CP34231 750 aa-1.08□□□□□ -2.58
snR38snR38 RFC3P38629 340 aa-1.08□□□□□ -2.58
snR38snR38 YHL041WP38730 149 aa-1.08□□□□□ -2.58
snR38snR38 RRG9P40156 214 aa-1.08□□□□□ -2.58
snR38snR38 LCB2P40970 561 aa-1.08□□□□□ -2.58
snR38snR38 CIN2P46670 268 aa-1.08□□□□□ -2.58
snR38snR38 MND1P53102 219 aa-1.08□□□□□ -2.58
snR38snR38 YGR117CP53270 476 aa-1.08□□□□□ -2.58
snR38snR38 BIO4P53630 237 aa-1.08□□□□□ -2.58
snR38snR38 KTR5P53966 522 aaPredicted RBP-1.08□□□□□ -2.58
snR38snR38 YSA1Q01976 231 aa-1.08□□□□□ -2.58
snR38snR38 URH1Q04179 340 aa-1.08□□□□□ -2.58
snR38snR38 TAP42Q04372 366 aa-1.08□□□□□ -2.58
snR38snR38 YDL109CQ12103 647 aa-1.08□□□□□ -2.58
snR38snR38 PRR2Q12310 699 aa-1.08□□□□□ -2.58
snR38snR38 YJR112W-AQ3E743 109 aa-1.08□□□□□ -2.58
snR38snR38 YML133CQ03099 1374 aa-1.08□□□□□ -2.58
snR38snR38 YLL067CQ07888 1374 aa-1.08□□□□□ -2.58
snR38snR38 YLL066CQ99208 1374 aa-1.08□□□□□ -2.58
snR38snR38 HIS3P06633 220 aa-1.09□□□□□ -2.58
snR38snR38 SSC1P0CS90 654 aaKnown RBP-1.09□□□□□ -2.58
snR38snR38 DPM1P14020 267 aaKnown RBP-1.09□□□□□ -2.58
snR38snR38 RHB1P25378 209 aa-1.09□□□□□ -2.58
snR38snR38 GRX4P32642 244 aa-1.09□□□□□ -2.58
snR38snR38 SLC1P33333 303 aa-1.09□□□□□ -2.58
snR38snR38 MCR1P36060 302 aaKnown RBP-1.09□□□□□ -2.58
snR38snR38 YKL071WP36086 256 aa-1.09□□□□□ -2.58
snR38snR38 YHL026CP38740 315 aa-1.09□□□□□ -2.58
snR38snR38 ACA1P39970 489 aa-1.09□□□□□ -2.58
snR38snR38 KAP123P40069 1113 aaKnown RBP-1.09□□□□□ -2.58
snR38snR38 RPL13BP40212 199 aaKnown RBP-1.09□□□□□ -2.58
snR38snR38 RSM27P53305 110 aa-1.09□□□□□ -2.58
snR38snR38 FOL1P53848 824 aa-1.09□□□□□ -2.58
snR38snR38 YOR292CQ08743 309 aa-1.09□□□□□ -2.58
snR38snR38 RPL13AQ12690 199 aaPredicted RBP-1.09□□□□□ -2.58
snR38snR38 PUT1P09368 476 aa-1.1□□□□□ -2.59
snR38snR38 RPL23AP0CX41 137 aaKnown RBP-1.1□□□□□ -2.59
snR38snR38 RPL23BP0CX42 137 aaKnown RBP-1.1□□□□□ -2.59
snR38snR38 ALG1P16661 449 aa-1.1□□□□□ -2.59
snR38snR38 IMP2'P32351 346 aa-1.1□□□□□ -2.59
snR38snR38 HXT3P32466 567 aaKnown RBP-1.1□□□□□ -2.59
snR38snR38 YBR219CP38317 127 aa-1.1□□□□□ -2.59
snR38snR38 RPS0BP46654 252 aaKnown RBP-1.1□□□□□ -2.59
Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms