RNA–Protein interactions for RNA: YPR032W

SRO7, Transcript of Effector of Rab GTPase Sec4p, yeastyeast

Gene SRO7, Length 3,102 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRO7YPR032W HOM6P31116 359 aaKnown RBP3.78□□□□□ -1.8
SRO7YPR032W DHR2P36009 735 aaPredicted RBP3.78□□□□□ -1.8
SRO7YPR032W YNK1P36010 153 aaKnown RBP3.78□□□□□ -1.8
SRO7YPR032W ALP1P38971 573 aa3.78□□□□□ -1.8
SRO7YPR032W XDJ1P39102 459 aa3.78□□□□□ -1.8
SRO7YPR032W UIP3P39547 235 aa3.78□□□□□ -1.8
SRO7YPR032W RPN3P40016 523 aaKnown RBP3.78□□□□□ -1.8
SRO7YPR032W FIR1P40020 876 aa3.78□□□□□ -1.8
SRO7YPR032W YIR007WP40566 764 aa3.78□□□□□ -1.8
SRO7YPR032W RPL10P41805 221 aaKnown RBP3.78□□□□□ -1.8
SRO7YPR032W AGX1P43567 385 aa3.78□□□□□ -1.8
SRO7YPR032W MCM22P47167 239 aa3.78□□□□□ -1.8
SRO7YPR032W MNN10P50108 393 aaKnown RBP3.78□□□□□ -1.8
SRO7YPR032W YGL185CP53100 379 aa3.78□□□□□ -1.8
SRO7YPR032W BUD9P53226 547 aa3.78□□□□□ -1.8
SRO7YPR032W YMR087WQ04299 284 aa3.78□□□□□ -1.8
SRO7YPR032W GAD1Q04792 585 aa3.78□□□□□ -1.8
SRO7YPR032W DCR2Q05924 578 aa3.78□□□□□ -1.8
SRO7YPR032W BSC1Q12140 328 aa3.78□□□□□ -1.8
SRO7YPR032W MDY2Q12285 212 aa3.78□□□□□ -1.8
SRO7YPR032W MPD2Q99316 277 aa3.78□□□□□ -1.8
SRO7YPR032W YEL009C-AA0A023PZF2 135 aa3.77□□□□□ -1.81
SRO7YPR032W TIM9O74700 87 aa3.77□□□□□ -1.81
SRO7YPR032W PHO5P00635 467 aa3.77□□□□□ -1.81
SRO7YPR032W HIS5P07172 385 aa3.77□□□□□ -1.81
SRO7YPR032W MET3P08536 511 aa3.77□□□□□ -1.81
SRO7YPR032W SSD1P24276 1250 aaKnown RBP RIP-Chip data3.77□□□□□ -1.81not detected
SRO7YPR032W CDC5P32562 705 aa3.77□□□□□ -1.81
SRO7YPR032W YEF1P32622 495 aa3.77□□□□□ -1.81
SRO7YPR032W TUL1P36096 758 aa3.77□□□□□ -1.81
SRO7YPR032W AFG3P39925 761 aa3.77□□□□□ -1.81
SRO7YPR032W RRG9P40156 214 aa3.77□□□□□ -1.81
SRO7YPR032W GAB1P41733 394 aa3.77□□□□□ -1.81
SRO7YPR032W SNG1P46950 547 aa3.77□□□□□ -1.81
SRO7YPR032W TAX4P47030 604 aa3.77□□□□□ -1.81
SRO7YPR032W LYS20P48570 428 aaKnown RBP3.77□□□□□ -1.81
SRO7YPR032W GPG1P53130 126 aa3.77□□□□□ -1.81
SRO7YPR032W LSB1P53281 241 aa3.77□□□□□ -1.81
SRO7YPR032W TRS31Q03337 283 aa3.77□□□□□ -1.81
SRO7YPR032W RGT2Q12300 763 aa3.77□□□□□ -1.81
SRO7YPR032W RPS9AO13516 197 aaKnown RBP3.77□□□□□ -1.81
SRO7YPR032W SIR2P06700 562 aa3.77□□□□□ -1.81
SRO7YPR032W HAP2P06774 265 aa3.77□□□□□ -1.81
SRO7YPR032W SWI5P08153 709 aa3.77□□□□□ -1.81
SRO7YPR032W NAM2P11325 894 aa3.77□□□□□ -1.81
SRO7YPR032W ART10P18634 518 aaKnown RBP3.77□□□□□ -1.81
SRO7YPR032W TRX2P22803 104 aaKnown RBP3.77□□□□□ -1.81
SRO7YPR032W VPH1P32563 840 aaKnown RBP3.77□□□□□ -1.81
SRO7YPR032W SSH1P38353 490 aaKnown RBP3.77□□□□□ -1.81
SRO7YPR032W RGI1P40043 161 aaPredicted RBP3.77□□□□□ -1.81
SRO7YPR032W PTP3P40048 928 aa3.77□□□□□ -1.81
SRO7YPR032W DOT6P40059 670 aaKnown RBP3.77□□□□□ -1.81
SRO7YPR032W LSM5P40089 93 aaKnown RBP3.77□□□□□ -1.81
SRO7YPR032W BMT5P40493 336 aa3.77□□□□□ -1.81
SRO7YPR032W CFD1P40558 293 aa3.77□□□□□ -1.81
SRO7YPR032W SDT1P53078 280 aa3.77□□□□□ -1.81
SRO7YPR032W SYF2P53277 215 aaPredicted RBP3.77□□□□□ -1.81
SRO7YPR032W RPT4P53549 437 aaKnown RBP3.77□□□□□ -1.81
SRO7YPR032W DUS1P53759 423 aaKnown RBP3.77□□□□□ -1.81
SRO7YPR032W FMP41P53889 259 aaKnown RBP3.77□□□□□ -1.81
SRO7YPR032W CDC14Q00684 551 aa3.77□□□□□ -1.81
SRO7YPR032W CWC27Q02770 301 aa3.77□□□□□ -1.81
SRO7YPR032W HPT1Q04178 221 aaKnown RBP3.77□□□□□ -1.81
SRO7YPR032W CUE4Q04201 117 aaPredicted RBP3.77□□□□□ -1.81
SRO7YPR032W YLR326WQ06170 240 aaKnown RBP3.77□□□□□ -1.81
SRO7YPR032W RAD28Q12021 506 aa3.77□□□□□ -1.81
SRO7YPR032W YLR049CQ12110 428 aa3.77□□□□□ -1.81
SRO7YPR032W RMD5Q12508 421 aa3.77□□□□□ -1.81
SRO7YPR032W PEP4P07267 405 aaKnown RBP3.77□□□□□ -1.81
SRO7YPR032W ATP5P09457 212 aa3.77□□□□□ -1.81
SRO7YPR032W HOM3P10869 527 aa3.77□□□□□ -1.81
SRO7YPR032W MAG1P22134 296 aaKnown RBP3.77□□□□□ -1.81
SRO7YPR032W SEC22P22214 214 aa3.77□□□□□ -1.81
SRO7YPR032W PRE7P23724 241 aaKnown RBP3.77□□□□□ -1.81
SRO7YPR032W OAC1P32332 324 aa3.77□□□□□ -1.81
SRO7YPR032W GCD11P32481 527 aaKnown RBP3.77□□□□□ -1.81
SRO7YPR032W APE3P37302 537 aaKnown RBP3.77□□□□□ -1.81
SRO7YPR032W GIM4P40005 111 aaKnown RBP3.77□□□□□ -1.81
SRO7YPR032W POP1P41812 875 aa3.77□□□□□ -1.81
SRO7YPR032W RRT5P43607 289 aa3.77□□□□□ -1.81
SRO7YPR032W STE24P47154 453 aa3.77□□□□□ -1.81
SRO7YPR032W IBD2P53892 351 aa3.77□□□□□ -1.81
SRO7YPR032W VID22Q05934 901 aa3.77□□□□□ -1.81
SRO7YPR032W PLB3Q08108 686 aa3.77□□□□□ -1.81
SRO7YPR032W YOL114CQ12322 202 aa3.77□□□□□ -1.81
SRO7YPR032W CDC34P14682 295 aa3.76□□□□□ -1.81
SRO7YPR032W CKA1P15790 372 aa3.76□□□□□ -1.81
SRO7YPR032W ERD1P16151 362 aa3.76□□□□□ -1.81
SRO7YPR032W ERD2P18414 219 aa3.76□□□□□ -1.81
SRO7YPR032W STE50P25344 346 aa3.76□□□□□ -1.81
SRO7YPR032W DAL3P32459 195 aa3.76□□□□□ -1.81
SRO7YPR032W COT1P32798 439 aa3.76□□□□□ -1.81
SRO7YPR032W SFK1P35735 353 aa3.76□□□□□ -1.81
SRO7YPR032W GCV3P39726 170 aaPredicted RBP3.76□□□□□ -1.81
SRO7YPR032W MMF1P40185 145 aaKnown RBP3.76□□□□□ -1.81
SRO7YPR032W IME4P41833 600 aa3.76□□□□□ -1.81
SRO7YPR032W NIT2P47016 307 aa3.76□□□□□ -1.81
SRO7YPR032W LOH1P47055 219 aa3.76□□□□□ -1.81
SRO7YPR032W ASN1P49089 572 aaKnown RBP3.76□□□□□ -1.81
SRO7YPR032W TIM21P53220 239 aa3.76□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms