RNA–Protein interactions for RNA: YOR005C

DNL4, Transcript of DNA ligase required for nonhomologous end-joining (NHEJ), yeastyeast

Gene DNL4, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNL4YOR005C TIM8P57744 87 aa2.42□□□□□ -2.02
DNL4YOR005C RHO4Q00246 291 aa2.42□□□□□ -2.02
DNL4YOR005C FMP30Q02883 468 aa2.42□□□□□ -2.02
DNL4YOR005C IRC4Q03036 179 aa2.42□□□□□ -2.02
DNL4YOR005C YDR476CQ03362 224 aa2.42□□□□□ -2.02
DNL4YOR005C PLP1Q04004 230 aa2.42□□□□□ -2.02
DNL4YOR005C YMR087WQ04299 284 aa2.42□□□□□ -2.02
DNL4YOR005C URC2Q04411 772 aa2.42□□□□□ -2.02
DNL4YOR005C SWF1Q04629 336 aa2.42□□□□□ -2.02
DNL4YOR005C PRM6Q04705 352 aa2.42□□□□□ -2.02
DNL4YOR005C YDR222WQ04925 415 aa2.42□□□□□ -2.02
DNL4YOR005C YMR226CQ05016 267 aaKnown RBP2.42□□□□□ -2.02
DNL4YOR005C SSQ1Q05931 657 aaPredicted RBP2.42□□□□□ -2.02
DNL4YOR005C GGA1Q06336 557 aa2.42□□□□□ -2.02
DNL4YOR005C ACF2Q12168 779 aa2.42□□□□□ -2.02
DNL4YOR005C DCP1Q12517 231 aaPredicted RBP2.42□□□□□ -2.02
DNL4YOR005C ADF1Q2V2Q1 113 aa2.42□□□□□ -2.02
DNL4YOR005C FLO1P32768 1537 aa2.41□□□□□ -2.02
DNL4YOR005C BI2P03873 423 aa2.41□□□□□ -2.02
DNL4YOR005C RRT12P25381 491 aa2.41□□□□□ -2.02
DNL4YOR005C GID7P25569 745 aa2.41□□□□□ -2.02
DNL4YOR005C ADY2P25613 283 aa2.41□□□□□ -2.02
DNL4YOR005C PPZ1P26570 692 aa2.41□□□□□ -2.02
DNL4YOR005C CYS4P32582 507 aaKnown RBP2.41□□□□□ -2.02
DNL4YOR005C MRP4P32902 394 aa2.41□□□□□ -2.02
DNL4YOR005C BUD2P33314 1104 aa2.41□□□□□ -2.02
DNL4YOR005C DED81P38707 554 aaKnown RBP2.41□□□□□ -2.02
DNL4YOR005C FMP32P43557 207 aa2.41□□□□□ -2.02
DNL4YOR005C YHC3P47040 408 aa2.41□□□□□ -2.02
DNL4YOR005C VOA1P53262 265 aa2.41□□□□□ -2.02
DNL4YOR005C MPP6P53725 186 aaPredicted RBP2.41□□□□□ -2.02
DNL4YOR005C YPL014WQ02606 381 aa2.41□□□□□ -2.02
DNL4YOR005C ATC1Q04005 294 aa2.41□□□□□ -2.02
DNL4YOR005C APC4Q04601 652 aa2.41□□□□□ -2.02
DNL4YOR005C IVY1Q04934 453 aa2.41□□□□□ -2.02
DNL4YOR005C AAD15Q08361 143 aa2.41□□□□□ -2.02
DNL4YOR005C YPR202WQ08993 238 aa2.41□□□□□ -2.02
DNL4YOR005C AIM45Q12480 344 aaKnown RBP2.41□□□□□ -2.02
DNL4YOR005C ILV1P00927 576 aaKnown RBP2.41□□□□□ -2.02
DNL4YOR005C CDC21P06785 304 aa2.41□□□□□ -2.02
DNL4YOR005C RPL12AP0CX53 165 aaKnown RBP2.41□□□□□ -2.02
DNL4YOR005C RPL12BP0CX54 165 aa2.41□□□□□ -2.02
DNL4YOR005C SAR1P20606 190 aaKnown RBP2.41□□□□□ -2.02
DNL4YOR005C CTR86P25355 563 aa2.41□□□□□ -2.02
DNL4YOR005C MGR1P25573 417 aa2.41□□□□□ -2.02
DNL4YOR005C MGT1P26188 188 aa2.41□□□□□ -2.02
DNL4YOR005C ICL1P28240 557 aaPredicted RBP2.41□□□□□ -2.02
DNL4YOR005C UTR4P32626 227 aa2.41□□□□□ -2.02
DNL4YOR005C CSE1P33307 960 aa2.41□□□□□ -2.02
DNL4YOR005C RCN1P36054 211 aa2.41□□□□□ -2.02
DNL4YOR005C ETR1P38071 380 aa2.41□□□□□ -2.02
DNL4YOR005C SHC1P39000 512 aa2.41□□□□□ -2.02
DNL4YOR005C FAU1P40099 211 aa2.41□□□□□ -2.02
DNL4YOR005C BNA3P47039 444 aaKnown RBP2.41□□□□□ -2.02
DNL4YOR005C BIR1P47134 954 aa2.41□□□□□ -2.02
DNL4YOR005C PMT5P52867 743 aa2.41□□□□□ -2.02
DNL4YOR005C GIP3Q03016 1276 aa2.41□□□□□ -2.02
DNL4YOR005C TVP15Q03860 143 aa2.41□□□□□ -2.02
DNL4YOR005C YDR387CQ04162 555 aa2.41□□□□□ -2.02
DNL4YOR005C AIM33Q04516 312 aa2.41□□□□□ -2.02
DNL4YOR005C ARP10Q04549 284 aa2.41□□□□□ -2.02
DNL4YOR005C SPC2Q04969 178 aa2.41□□□□□ -2.02
DNL4YOR005C BOP2Q06150 570 aa2.41□□□□□ -2.02
DNL4YOR005C ECM7Q06200 448 aa2.41□□□□□ -2.02
DNL4YOR005C YDR262WQ12331 272 aa2.41□□□□□ -2.02
DNL4YOR005C PAA1Q12447 191 aaKnown RBP2.41□□□□□ -2.02
DNL4YOR005C IMA3P0CW40 589 aa2.41□□□□□ -2.02
DNL4YOR005C IMA4P0CW41 589 aa2.41□□□□□ -2.02
DNL4YOR005C TCP1P12612 559 aaKnown RBP2.41□□□□□ -2.02
DNL4YOR005C KIN3P22209 435 aa2.41□□□□□ -2.02
DNL4YOR005C SEC1P30619 724 aaKnown RBP2.41□□□□□ -2.02
DNL4YOR005C ATP7P30902 174 aa2.41□□□□□ -2.02
DNL4YOR005C SNC1P31109 117 aa2.41□□□□□ -2.02
DNL4YOR005C SPR1P32603 445 aa2.41□□□□□ -2.02
DNL4YOR005C FRE1P32791 686 aa2.41□□□□□ -2.02
DNL4YOR005C SPT10P35208 640 aa2.41□□□□□ -2.02
DNL4YOR005C CBP4P37267 147 aa2.41□□□□□ -2.02
DNL4YOR005C LEU5P38702 357 aa2.41□□□□□ -2.02
DNL4YOR005C PRP39P39682 629 aaKnown RBP2.41□□□□□ -2.02
DNL4YOR005C GLG2P47011 380 aa2.41□□□□□ -2.02
DNL4YOR005C STB4P50104 949 aa2.41□□□□□ -2.02
DNL4YOR005C YIF1P53845 314 aaKnown RBP2.41□□□□□ -2.02
DNL4YOR005C YNL146WP53906 100 aa2.41□□□□□ -2.02
DNL4YOR005C GPI17Q04080 534 aa2.41□□□□□ -2.02
DNL4YOR005C TMN2Q04562 672 aa2.41□□□□□ -2.02
DNL4YOR005C YLL007CQ07799 665 aa2.41□□□□□ -2.02
DNL4YOR005C IMA2Q08295 589 aa2.41□□□□□ -2.02
DNL4YOR005C UIP4Q08926 304 aa2.41□□□□□ -2.02
DNL4YOR005C RSA1Q08932 381 aa2.41□□□□□ -2.02
DNL4YOR005C YDR018CQ12185 396 aa2.41□□□□□ -2.02
DNL4YOR005C ATG34Q12292 412 aa2.41□□□□□ -2.02
DNL4YOR005C RKM5Q12367 367 aa2.41□□□□□ -2.02
DNL4YOR005C EMP46Q12396 444 aa2.41□□□□□ -2.02
DNL4YOR005C GPA2P10823 449 aa2.4□□□□□ -2.03
DNL4YOR005C RPB8P20436 146 aa2.4□□□□□ -2.03
DNL4YOR005C VPS3P23643 1011 aa2.4□□□□□ -2.03
DNL4YOR005C RNQ1P25367 405 aa2.4□□□□□ -2.03
DNL4YOR005C HSP30P25619 332 aa2.4□□□□□ -2.03
DNL4YOR005C MSK1P32048 576 aa2.4□□□□□ -2.03
DNL4YOR005C ACH1P32316 526 aa2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 34.2 ms