RNA–Protein interactions for RNA: YOL117W

RRI2, Transcript of Subunit of the COP9 signalosome (CSN) complex, yeastyeast

Gene RRI2, Length 1,938 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRI2YOL117W UNG1P12887 359 aa2.16□□□□□ -2.06
RRI2YOL117W DBR1P24309 405 aaKnown RBP2.16□□□□□ -2.06
RRI2YOL117W GRR1P24814 1151 aa2.16□□□□□ -2.06
RRI2YOL117W RPL16AP26784 199 aaKnown RBP2.16□□□□□ -2.06
RRI2YOL117W PMT2P31382 759 aa2.16□□□□□ -2.06
RRI2YOL117W MSK1P32048 576 aa2.16□□□□□ -2.06
RRI2YOL117W EFB1P32471 206 aaKnown RBP2.16□□□□□ -2.06
RRI2YOL117W DTR1P38125 572 aa2.16□□□□□ -2.06
RRI2YOL117W SMP1P38128 452 aa2.16□□□□□ -2.06
RRI2YOL117W SHE1P38200 338 aa2.16□□□□□ -2.06
RRI2YOL117W RXT2P38255 430 aa2.16□□□□□ -2.06
RRI2YOL117W LYS12P40495 371 aaKnown RBP2.16□□□□□ -2.06
RRI2YOL117W ATP22P50273 684 aaPredicted RBP2.16□□□□□ -2.06
RRI2YOL117W UTP6Q02354 440 aaKnown RBP2.16□□□□□ -2.06
RRI2YOL117W IES4Q08561 116 aa2.16□□□□□ -2.06
RRI2YOL117W SLM3Q12093 417 aa2.16□□□□□ -2.06
RRI2YOL117W YDL109CQ12103 647 aa2.16□□□□□ -2.06
RRI2YOL117W RAX2Q12465 1220 aa2.16□□□□□ -2.06
RRI2YOL117W UBA1P22515 1024 aaKnown RBP2.15□□□□□ -2.06
RRI2YOL117W LDS1P31379 325 aa2.15□□□□□ -2.06
RRI2YOL117W SSE1P32589 693 aaKnown RBP2.15□□□□□ -2.06
RRI2YOL117W YKR015CP36111 568 aa2.15□□□□□ -2.06
RRI2YOL117W SOL2P37262 315 aa2.15□□□□□ -2.06
RRI2YOL117W BMT2P38278 337 aa2.15□□□□□ -2.06
RRI2YOL117W FLC3P53121 802 aa2.15□□□□□ -2.06
RRI2YOL117W YGR015CP53208 328 aa2.15□□□□□ -2.06
RRI2YOL117W YNR068CP53754 272 aa2.15□□□□□ -2.06
RRI2YOL117W APJ1P53940 528 aa2.15□□□□□ -2.06
RRI2YOL117W SHS1Q07657 551 aa2.15□□□□□ -2.06
RRI2YOL117W RPL6BP05739 176 aaKnown RBP2.15□□□□□ -2.07
RRI2YOL117W ADH5P38113 351 aaKnown RBP2.15□□□□□ -2.07
RRI2YOL117W PEX22P39718 180 aa2.15□□□□□ -2.07
RRI2YOL117W YJR054WP47114 497 aa2.15□□□□□ -2.07
RRI2YOL117W EFM3P47163 339 aa2.15□□□□□ -2.07
RRI2YOL117W RPL6AQ02326 176 aaKnown RBP2.15□□□□□ -2.07
RRI2YOL117W RMI1Q02685 241 aa2.15□□□□□ -2.07
RRI2YOL117W AIM33Q04516 312 aa2.15□□□□□ -2.07
RRI2YOL117W FSH2Q05015 223 aa2.15□□□□□ -2.07
RRI2YOL117W TIR4Q12218 487 aaPredicted RBP2.15□□□□□ -2.07
RRI2YOL117W YDR061WQ12298 539 aa2.15□□□□□ -2.07
RRI2YOL117W HMS1Q12398 434 aa2.15□□□□□ -2.07
RRI2YOL117W PUT4P15380 627 aa2.14□□□□□ -2.07
RRI2YOL117W MIR1P23641 311 aaKnown RBP2.14□□□□□ -2.07
RRI2YOL117W DAD2P36162 133 aa2.14□□□□□ -2.07
RRI2YOL117W SHE3P38272 425 aaKnown RBP2.14□□□□□ -2.07
RRI2YOL117W RCK2P38623 610 aa2.14□□□□□ -2.07
RRI2YOL117W PEX27Q08580 376 aa2.14□□□□□ -2.07
RRI2YOL117W RDS1P25611 832 aa2.13□□□□□ -2.07
RRI2YOL117W WSS1P38838 269 aa2.13□□□□□ -2.07
RRI2YOL117W SEC9P40357 651 aa2.13□□□□□ -2.07
RRI2YOL117W CDH1P53197 566 aa2.13□□□□□ -2.07
RRI2YOL117W YGR067CP53243 804 aa2.13□□□□□ -2.07
RRI2YOL117W SUR7P54003 302 aa2.13□□□□□ -2.07
RRI2YOL117W YPL107WQ02873 248 aa2.13□□□□□ -2.07
RRI2YOL117W SCS7Q03529 384 aa2.13□□□□□ -2.07
RRI2YOL117W YDR115WQ04598 105 aa2.13□□□□□ -2.07
RRI2YOL117W TFB5Q3E7C1 72 aaPredicted RBP2.13□□□□□ -2.07
RRI2YOL117W FSH3Q99369 266 aa2.13□□□□□ -2.07
RRI2YOL117W YBL028CP38202 106 aa2.13□□□□□ -2.07
RRI2YOL117W GDT1P38301 280 aaPredicted RBP2.13□□□□□ -2.07
RRI2YOL117W ATG7P38862 630 aa2.13□□□□□ -2.07
RRI2YOL117W AIM23P47015 356 aa2.13□□□□□ -2.07
RRI2YOL117W LST7P53237 242 aa2.13□□□□□ -2.07
RRI2YOL117W TRM82Q03774 444 aa2.13□□□□□ -2.07
RRI2YOL117W FRE8Q12209 686 aa2.13□□□□□ -2.07
RRI2YOL117W YOR012WQ12351 137 aa2.13□□□□□ -2.07
RRI2YOL117W FRE6Q12473 712 aa2.13□□□□□ -2.07
RRI2YOL117W CKI1P20485 582 aa2.12□□□□□ -2.07
RRI2YOL117W CYM1P32898 989 aa2.12□□□□□ -2.07
RRI2YOL117W YBR241CP38142 488 aa2.12□□□□□ -2.07
RRI2YOL117W WSC4P38739 605 aa2.12□□□□□ -2.07
RRI2YOL117W YHR122WP38829 231 aa2.12□□□□□ -2.07
RRI2YOL117W YFL012WP43580 148 aa2.12□□□□□ -2.07
RRI2YOL117W BIO3P50277 480 aa2.12□□□□□ -2.07
RRI2YOL117W RCF1Q03713 159 aa2.12□□□□□ -2.07
RRI2YOL117W YOL075CQ08234 1294 aa2.12□□□□□ -2.07
RRI2YOL117W THR4P16120 514 aaKnown RBP2.11□□□□□ -2.07
RRI2YOL117W FHL1P39521 936 aa2.11□□□□□ -2.07
RRI2YOL117W CWC22P53333 577 aaKnown RBP2.11□□□□□ -2.07
RRI2YOL117W SLT2Q00772 484 aa2.11□□□□□ -2.07
RRI2YOL117W MCH1Q07376 486 aa2.11□□□□□ -2.07
RRI2YOL117W SRO7Q12038 1033 aa2.11□□□□□ -2.07
RRI2YOL117W LDB17Q12342 491 aa2.11□□□□□ -2.07
RRI2YOL117W RPS14AP06367 137 aaKnown RBP2.11□□□□□ -2.07
RRI2YOL117W IST2P38250 946 aa2.11□□□□□ -2.07
RRI2YOL117W RPS14BP39516 138 aaKnown RBP2.11□□□□□ -2.07
RRI2YOL117W YCH1P42937 148 aa2.11□□□□□ -2.07
RRI2YOL117W EOS1P53938 366 aa2.11□□□□□ -2.07
RRI2YOL117W GAS2Q06135 555 aa2.11□□□□□ -2.07
RRI2YOL117W UBA3Q99344 299 aa2.11□□□□□ -2.07
RRI2YOL117W POT1P27796 417 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
RRI2YOL117W MRPS5P33759 307 aa2.1□□□□□ -2.07
RRI2YOL117W PTK1P36002 662 aaPredicted RBP2.1□□□□□ -2.07
RRI2YOL117W COS9P36034 407 aa2.1□□□□□ -2.07
RRI2YOL117W YPT35P38815 214 aaKnown RBP2.1□□□□□ -2.07
RRI2YOL117W SNL1P40548 159 aa2.1□□□□□ -2.07
RRI2YOL117W MPS2P53159 387 aa2.1□□□□□ -2.07
RRI2YOL117W YNL143CP53908 130 aa2.1□□□□□ -2.07
RRI2YOL117W RNH201P53942 307 aa2.1□□□□□ -2.07
RRI2YOL117W YMR010WQ03687 405 aa2.1□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms