RNA–Protein interactions for RNA: YOL054W

PSH1, Transcript of E3 ubiquitin ligase targeting centromere-binding protein Cse4p, yeastyeast

Gene PSH1, Length 1,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PSH1YOL054W MPS1P54199 764 aa5.34□□□□□ -1.55
PSH1YOL054W PFA5Q03289 374 aa5.34□□□□□ -1.55
PSH1YOL054W TY2A-DR2Q03483 438 aa5.34□□□□□ -1.55
PSH1YOL054W TRS23Q03784 219 aa5.34□□□□□ -1.55
PSH1YOL054W YLR345WQ06137 509 aa5.34□□□□□ -1.55
PSH1YOL054W ARR1Q06596 294 aa5.34□□□□□ -1.55
PSH1YOL054W GSH2Q08220 491 aa5.34□□□□□ -1.55
PSH1YOL054W SAM4Q08985 325 aaKnown RBP5.34□□□□□ -1.55
PSH1YOL054W TY2A-BQ12260 438 aa5.34□□□□□ -1.55
PSH1YOL054W RBD2Q12270 262 aa5.34□□□□□ -1.55
PSH1YOL054W TY2A-OR2Q12293 438 aa5.34□□□□□ -1.55
PSH1YOL054W BBP1Q12365 385 aa5.34□□□□□ -1.55
PSH1YOL054W TY2A-DR1Q12392 438 aa5.34□□□□□ -1.55
PSH1YOL054W AHC1Q12433 566 aa5.34□□□□□ -1.55
PSH1YOL054W TY2A-OR1Q12439 438 aa5.34□□□□□ -1.55
PSH1YOL054W SNF8Q12483 233 aa5.34□□□□□ -1.55
PSH1YOL054W HTZ1Q12692 134 aaKnown RBP5.34□□□□□ -1.55
PSH1YOL054W YDR034W-BQ6Q5X2 51 aa5.34□□□□□ -1.55
PSH1YOL054W PNO1Q99216 274 aaKnown RBP5.34□□□□□ -1.55
PSH1YOL054W TY2A-DR3Q99303 438 aa5.34□□□□□ -1.55
PSH1YOL054W CAP2P13517 287 aa5.33□□□□□ -1.56
PSH1YOL054W RPL24BP24000 155 aaKnown RBP5.33□□□□□ -1.56
PSH1YOL054W HSP30P25619 332 aa5.33□□□□□ -1.56
PSH1YOL054W SPT14P32363 452 aa5.33□□□□□ -1.56
PSH1YOL054W HIR2P32480 875 aa5.33□□□□□ -1.56
PSH1YOL054W TIP20P33891 701 aa5.33□□□□□ -1.56
PSH1YOL054W GLG1P36143 616 aa5.33□□□□□ -1.56
PSH1YOL054W BMT2P38278 337 aa5.33□□□□□ -1.56
PSH1YOL054W PCL6P40038 420 aa5.33□□□□□ -1.56
PSH1YOL054W PRE6P40303 254 aaKnown RBP5.33□□□□□ -1.56
PSH1YOL054W AIM22P47051 409 aa5.33□□□□□ -1.56
PSH1YOL054W CSL4P53859 292 aaPredicted RBP5.33□□□□□ -1.56
PSH1YOL054W YNL143CP53908 130 aa5.33□□□□□ -1.56
PSH1YOL054W NUP49Q02199 472 aa5.33□□□□□ -1.56
PSH1YOL054W GRX5Q02784 150 aa5.33□□□□□ -1.56
PSH1YOL054W YML108WQ03759 105 aa5.33□□□□□ -1.56
PSH1YOL054W VHS1Q03785 461 aa5.33□□□□□ -1.56
PSH1YOL054W FIN1Q03898 291 aa5.33□□□□□ -1.56
PSH1YOL054W COA4Q05809 96 aa5.33□□□□□ -1.56
PSH1YOL054W RAD34Q06665 692 aa5.33□□□□□ -1.56
PSH1YOL054W GRS2Q06817 618 aa5.33□□□□□ -1.56
PSH1YOL054W IRC10Q08118 586 aa5.33□□□□□ -1.56
PSH1YOL054W RRT8Q08219 342 aa5.33□□□□□ -1.56
PSH1YOL054W ACF2Q12168 779 aa5.33□□□□□ -1.56
PSH1YOL054W YOR012WQ12351 137 aa5.33□□□□□ -1.56
PSH1YOL054W ERG27Q12452 347 aaKnown RBP5.33□□□□□ -1.56
PSH1YOL054W YCL012CQ8J0M4 134 aa5.33□□□□□ -1.56
PSH1YOL054W YER175W-AQ8TGU4 54 aa5.33□□□□□ -1.56
PSH1YOL054W TOR1P35169 2470 aa5.33□□□□□ -1.56
PSH1YOL054W DBF2P22204 572 aa5.32□□□□□ -1.56
PSH1YOL054W YCR016WP25617 290 aaKnown RBP5.32□□□□□ -1.56
PSH1YOL054W ALY1P36117 915 aa5.32□□□□□ -1.56
PSH1YOL054W GMH1P36125 273 aa5.32□□□□□ -1.56
PSH1YOL054W UTP30P36144 274 aaKnown RBP5.32□□□□□ -1.56
PSH1YOL054W MRPL40P36534 297 aa5.32□□□□□ -1.56
PSH1YOL054W ARA1P38115 344 aa5.32□□□□□ -1.56
PSH1YOL054W YHK8P38776 514 aa5.32□□□□□ -1.56
PSH1YOL054W IPI1P38803 334 aaPredicted RBP5.32□□□□□ -1.56
PSH1YOL054W ATG7P38862 630 aa5.32□□□□□ -1.56
PSH1YOL054W AFG3P39925 761 aa5.32□□□□□ -1.56
PSH1YOL054W PAC11P40960 533 aa5.32□□□□□ -1.56
PSH1YOL054W PMT6P42934 759 aa5.32□□□□□ -1.56
PSH1YOL054W SER2P42941 309 aa5.32□□□□□ -1.56
PSH1YOL054W FET5P43561 622 aa5.32□□□□□ -1.56
PSH1YOL054W GAT1P43574 510 aa5.32□□□□□ -1.56
PSH1YOL054W GOR1P53839 350 aa5.32□□□□□ -1.56
PSH1YOL054W SMX3P54999 86 aaPredicted RBP5.32□□□□□ -1.56
PSH1YOL054W TIM11P81449 96 aaPredicted RBP5.32□□□□□ -1.56
PSH1YOL054W NGL2Q03264 515 aaKnown RBP5.32□□□□□ -1.56
PSH1YOL054W YMD8Q03697 442 aa5.32□□□□□ -1.56
PSH1YOL054W ATG38Q05789 226 aaKnown RBP5.32□□□□□ -1.56
PSH1YOL054W SYO1Q07395 620 aa5.32□□□□□ -1.56
PSH1YOL054W NFI1Q12216 726 aa5.32□□□□□ -1.56
PSH1YOL054W SUT2Q12286 268 aa5.32□□□□□ -1.56
PSH1YOL054W YLR126CQ12288 251 aa5.32□□□□□ -1.56
PSH1YOL054W GTT2Q12390 233 aa5.32□□□□□ -1.56
PSH1YOL054W PEX11Q12462 236 aa5.32□□□□□ -1.56
PSH1YOL054W MHT1Q12525 324 aa5.32□□□□□ -1.56
PSH1YOL054W STE3P06783 470 aa5.31□□□□□ -1.56
PSH1YOL054W UNG1P12887 359 aa5.31□□□□□ -1.56
PSH1YOL054W MDH1P17505 334 aaKnown RBP RIP-Chip data5.31□□□□□ -1.56not detected
PSH1YOL054W RRP7P25368 297 aaPredicted RBP5.31□□□□□ -1.56
PSH1YOL054W CNE1P27825 502 aa5.31□□□□□ -1.56
PSH1YOL054W MRPL9P31334 269 aa5.31□□□□□ -1.56
PSH1YOL054W YPT52P36018 234 aaKnown RBP5.31□□□□□ -1.56
PSH1YOL054W PAN6P40459 309 aa5.31□□□□□ -1.56
PSH1YOL054W UFE1P41834 346 aa5.31□□□□□ -1.56
PSH1YOL054W MAK3Q03503 176 aa5.31□□□□□ -1.56
PSH1YOL054W HER2Q03557 464 aa5.31□□□□□ -1.56
PSH1YOL054W YMR206WQ03695 313 aa5.31□□□□□ -1.56
PSH1YOL054W SPC19Q03954 165 aa5.31□□□□□ -1.56
PSH1YOL054W VPS74Q06385 345 aa5.31□□□□□ -1.56
PSH1YOL054W SWA2Q06677 668 aa5.31□□□□□ -1.56
PSH1YOL054W BAG7Q12128 409 aa5.31□□□□□ -1.56
PSH1YOL054W RPN5Q12250 445 aaKnown RBP5.31□□□□□ -1.56
PSH1YOL054W RRP42Q12277 265 aaPredicted RBP5.31□□□□□ -1.56
PSH1YOL054W YPR096CO13587 100 aa5.3□□□□□ -1.56
PSH1YOL054W CDC21P06785 304 aa5.3□□□□□ -1.56
PSH1YOL054W YAR066WP0CX18 203 aa5.3□□□□□ -1.56
PSH1YOL054W YHR214WP0CX19 203 aa5.3□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms