RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W ZRG8P40021 1076 aa9.52□□□□□ -0.89
PRE6YOL038W YFL066CP43538 392 aa9.52□□□□□ -0.89
PRE6YOL038W ECL1P48235 211 aa9.52□□□□□ -0.89
PRE6YOL038W MKC7P53379 596 aa9.52□□□□□ -0.89
PRE6YOL038W YMR102CQ03177 834 aa9.52□□□□□ -0.89
PRE6YOL038W URC2Q04411 772 aa9.52□□□□□ -0.89
PRE6YOL038W COX20Q04935 205 aa9.52□□□□□ -0.89
PRE6YOL038W BCP1Q06338 283 aa9.52□□□□□ -0.89
PRE6YOL038W BRX1Q08235 291 aaKnown RBP9.52□□□□□ -0.89
PRE6YOL038W ENB1Q08299 606 aa9.52□□□□□ -0.89
PRE6YOL038W SNX3Q08826 162 aaKnown RBP9.52□□□□□ -0.89
PRE6YOL038W EHD3P28817 500 aa9.51□□□□□ -0.89
PRE6YOL038W MIA40P36046 403 aa9.51□□□□□ -0.89
PRE6YOL038W RSP5P39940 809 aaKnown RBP9.51□□□□□ -0.89
PRE6YOL038W LSM4P40070 187 aaKnown RBP9.51□□□□□ -0.89
PRE6YOL038W MPM1P40364 252 aa9.51□□□□□ -0.89
PRE6YOL038W LYS5P50113 272 aa9.51□□□□□ -0.89
PRE6YOL038W MIG2P53035 382 aa9.51□□□□□ -0.89
PRE6YOL038W TWF1P53250 332 aa9.51□□□□□ -0.89
PRE6YOL038W ASA1Q06822 443 aa9.51□□□□□ -0.89
PRE6YOL038W AVO1Q08236 1176 aa9.51□□□□□ -0.89
PRE6YOL038W YPL225WQ08971 146 aaKnown RBP9.51□□□□□ -0.89
PRE6YOL038W MCP1Q12106 302 aa9.51□□□□□ -0.89
PRE6YOL038W WTM1Q12363 437 aaKnown RBP9.51□□□□□ -0.89
PRE6YOL038W ERD2P18414 219 aa9.5□□□□□ -0.89
PRE6YOL038W PEX6P33760 1030 aa9.5□□□□□ -0.89
PRE6YOL038W MRP8P35719 219 aa9.5□□□□□ -0.89
PRE6YOL038W YGP1P38616 354 aaKnown RBP9.5□□□□□ -0.89
PRE6YOL038W YHR097CP38809 366 aaKnown RBP9.5□□□□□ -0.89
PRE6YOL038W YHR180WP38868 163 aa9.5□□□□□ -0.89
PRE6YOL038W YHR218WP38899 603 aa9.5□□□□□ -0.89
PRE6YOL038W SEN34P39707 275 aa9.5□□□□□ -0.89
PRE6YOL038W YMR265CQ03508 461 aaKnown RBP9.5□□□□□ -0.89
PRE6YOL038W ARO10Q06408 635 aa9.5□□□□□ -0.89
PRE6YOL038W RDL2Q08742 149 aaKnown RBP9.5□□□□□ -0.89
PRE6YOL038W YOR214CQ12282 236 aa9.5□□□□□ -0.89
PRE6YOL038W ATP2P00830 511 aaKnown RBP9.49□□□□□ -0.89
PRE6YOL038W PMR1P13586 950 aa9.49□□□□□ -0.89
PRE6YOL038W ATP7P30902 174 aa9.49□□□□□ -0.89
PRE6YOL038W PDB1P32473 366 aaKnown RBP9.49□□□□□ -0.89
PRE6YOL038W SNM1P40993 198 aa9.49□□□□□ -0.89
PRE6YOL038W YGR201CP42936 225 aa9.49□□□□□ -0.89
PRE6YOL038W YFL051CP43552 160 aa9.49□□□□□ -0.89
PRE6YOL038W YJR142WP47173 342 aa9.49□□□□□ -0.89
PRE6YOL038W SHE4P51534 789 aa9.49□□□□□ -0.89
PRE6YOL038W MON1P53129 644 aa9.49□□□□□ -0.89
PRE6YOL038W KRE28Q04431 385 aa9.49□□□□□ -0.89
PRE6YOL038W OSW1Q08692 278 aa9.49□□□□□ -0.89
PRE6YOL038W MUM3Q08750 479 aa9.49□□□□□ -0.89
PRE6YOL038W YIG1Q08956 461 aa9.49□□□□□ -0.89
PRE6YOL038W NCE102Q12207 173 aaRIP-Chip data9.49□□□□□ -0.89not detected
PRE6YOL038W DFG16Q99234 619 aa9.49□□□□□ -0.89
PRE6YOL038W YOL087CQ99247 1116 aa9.49□□□□□ -0.89
PRE6YOL038W HEM4P06174 275 aa9.48□□□□□ -0.89
PRE6YOL038W GAS1P22146 559 aaKnown RBP9.48□□□□□ -0.89
PRE6YOL038W SAC1P32368 623 aaKnown RBP9.48□□□□□ -0.89
PRE6YOL038W SWH1P35845 1188 aa9.48□□□□□ -0.89
PRE6YOL038W RFC4P40339 323 aaKnown RBP9.48□□□□□ -0.89
PRE6YOL038W MET28P40573 187 aa9.48□□□□□ -0.89
PRE6YOL038W HXT9P40885 567 aa9.48□□□□□ -0.89
PRE6YOL038W MSY1P48527 492 aa9.48□□□□□ -0.89
PRE6YOL038W INN1P53901 409 aa9.48□□□□□ -0.89
PRE6YOL038W HXT11P54862 567 aa9.48□□□□□ -0.89
PRE6YOL038W BTS1Q12051 335 aa9.48□□□□□ -0.89
PRE6YOL038W YDL199CQ12407 687 aa9.48□□□□□ -0.89
PRE6YOL038W PDX1P16451 410 aa9.47□□□□□ -0.89
PRE6YOL038W DBP3P20447 523 aaKnown RBP9.47□□□□□ -0.89
PRE6YOL038W YHL037CP38733 133 aa9.47□□□□□ -0.89
PRE6YOL038W MPC1P53157 130 aaKnown RBP9.47□□□□□ -0.89
PRE6YOL038W YGR126WP53274 230 aa9.47□□□□□ -0.89
PRE6YOL038W TPS1Q00764 495 aaKnown RBP9.47□□□□□ -0.89
PRE6YOL038W YPL039WQ03080 316 aa9.47□□□□□ -0.89
PRE6YOL038W COQ11Q05892 277 aa9.47□□□□□ -0.89
PRE6YOL038W ATG26Q06321 1198 aa9.47□□□□□ -0.89
PRE6YOL038W VPS36Q06696 566 aa9.47□□□□□ -0.89
PRE6YOL038W PSR1Q07800 427 aa9.47□□□□□ -0.89
PRE6YOL038W RRT8Q08219 342 aa9.47□□□□□ -0.89
PRE6YOL038W CRT10Q08226 957 aa9.47□□□□□ -0.89
PRE6YOL038W THP1Q08231 455 aa9.47□□□□□ -0.89
PRE6YOL038W GRE1Q08969 168 aa9.47□□□□□ -0.89
PRE6YOL038W TFS1P14306 219 aa9.46□□□□□ -0.9
PRE6YOL038W RPN2P32565 945 aaKnown RBP9.46□□□□□ -0.9
PRE6YOL038W NIT2P47016 307 aa9.46□□□□□ -0.9
PRE6YOL038W MEP3P53390 489 aa9.46□□□□□ -0.9
PRE6YOL038W ACL4Q03771 387 aa9.46□□□□□ -0.9
PRE6YOL038W RNH202Q05635 350 aa9.46□□□□□ -0.9
PRE6YOL038W MRL1Q06815 381 aa9.46□□□□□ -0.9
PRE6YOL038W RSA1Q08932 381 aa9.46□□□□□ -0.9
PRE6YOL038W YDL109CQ12103 647 aa9.46□□□□□ -0.9
PRE6YOL038W ADF1Q2V2Q1 113 aa9.46□□□□□ -0.9
PRE6YOL038W RAD7P06779 565 aa9.45□□□□□ -0.9
PRE6YOL038W CAR2P07991 424 aaKnown RBP9.45□□□□□ -0.9
PRE6YOL038W UTR1P21373 530 aa9.45□□□□□ -0.9
PRE6YOL038W YCR100CP25606 316 aa9.45□□□□□ -0.9
PRE6YOL038W COS9P36034 407 aa9.45□□□□□ -0.9
PRE6YOL038W RIB1P38066 345 aa9.45□□□□□ -0.9
PRE6YOL038W YEL068CP39977 110 aa9.45□□□□□ -0.9
PRE6YOL038W GAT2P40209 560 aa9.45□□□□□ -0.9
PRE6YOL038W MAM33P40513 266 aa9.45□□□□□ -0.9
PRE6YOL038W IMD4P50094 524 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms