RNA–Protein interactions for RNA: YNL288W

CAF40, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CAF40, Length 1,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF40YNL288W YAP1P19880 650 aaKnown RBP5.63□□□□□ -1.51
CAF40YNL288W SEC62P21825 274 aa5.63□□□□□ -1.51
CAF40YNL288W MCK1P21965 375 aaKnown RBP5.63□□□□□ -1.51
CAF40YNL288W DMC1P25453 334 aa5.63□□□□□ -1.51
CAF40YNL288W ARP2P32381 391 aaKnown RBP5.63□□□□□ -1.51
CAF40YNL288W DPH5P32469 300 aaPredicted RBP5.63□□□□□ -1.51
CAF40YNL288W LHP1P33399 275 aaKnown RBP5.63□□□□□ -1.51
CAF40YNL288W SWH1P35845 1188 aa5.63□□□□□ -1.51
CAF40YNL288W BIG1P38813 335 aa5.63□□□□□ -1.51
CAF40YNL288W YEL020CP39994 560 aa5.63□□□□□ -1.51
CAF40YNL288W ZRG8P40021 1076 aa5.63□□□□□ -1.51
CAF40YNL288W YGR201CP42936 225 aa5.63□□□□□ -1.51
CAF40YNL288W MDV1P47025 714 aa5.63□□□□□ -1.51
CAF40YNL288W BIT61P47041 543 aa5.63□□□□□ -1.51
CAF40YNL288W OCA1P50946 238 aaPredicted RBP5.63□□□□□ -1.51
CAF40YNL288W MAL11P53048 616 aa5.63□□□□□ -1.51
CAF40YNL288W TPC1P53257 314 aa5.63□□□□□ -1.51
CAF40YNL288W RSC9Q03124 581 aa5.63□□□□□ -1.51
CAF40YNL288W RIM13Q03792 727 aa5.63□□□□□ -1.51
CAF40YNL288W RAD30Q04049 632 aa5.63□□□□□ -1.51
CAF40YNL288W HFD1Q04458 532 aa5.63□□□□□ -1.51
CAF40YNL288W YOR214CQ12282 236 aa5.63□□□□□ -1.51
CAF40YNL288W WTM1Q12363 437 aaKnown RBP5.63□□□□□ -1.51
CAF40YNL288W PFK27Q12471 397 aaPredicted RBP5.63□□□□□ -1.51
CAF40YNL288W MF(ALPHA)1P01149 165 aa5.62□□□□□ -1.51
CAF40YNL288W GPI12P23797 304 aa5.62□□□□□ -1.51
CAF40YNL288W NUF2P33895 451 aa5.62□□□□□ -1.51
CAF40YNL288W LOT5P34234 306 aa5.62□□□□□ -1.51
CAF40YNL288W TUL1P36096 758 aa5.62□□□□□ -1.51
CAF40YNL288W PDX3P38075 228 aaKnown RBP5.62□□□□□ -1.51
CAF40YNL288W YBR139WP38109 508 aa5.62□□□□□ -1.51
CAF40YNL288W TAT2P38967 592 aa5.62□□□□□ -1.51
CAF40YNL288W RBG1P39729 369 aa5.62□□□□□ -1.51
CAF40YNL288W ARF3P40994 183 aaRIP-Chip data5.62□□□□□ -1.51not detected
CAF40YNL288W BAP3P41815 604 aa5.62□□□□□ -1.51
CAF40YNL288W IKS1P47042 667 aa5.62□□□□□ -1.51
CAF40YNL288W ILM1P47155 203 aa5.62□□□□□ -1.51
CAF40YNL288W GPI8P49018 411 aa5.62□□□□□ -1.51
CAF40YNL288W TWF1P53250 332 aa5.62□□□□□ -1.51
CAF40YNL288W COS6P53344 381 aa5.62□□□□□ -1.51
CAF40YNL288W YLR460CP54007 376 aa5.62□□□□□ -1.51
CAF40YNL288W NAT4Q04751 285 aa5.62□□□□□ -1.51
CAF40YNL288W DBP9Q06218 594 aaKnown RBP5.62□□□□□ -1.51
CAF40YNL288W ARO10Q06408 635 aa5.62□□□□□ -1.51
CAF40YNL288W RAX1Q08760 435 aa5.62□□□□□ -1.51
CAF40YNL288W YOS9Q99220 542 aa5.62□□□□□ -1.51
CAF40YNL288W RPL20AP0CX23 172 aaKnown RBP5.61□□□□□ -1.51
CAF40YNL288W RPL20BP0CX24 172 aaPredicted RBP5.61□□□□□ -1.51
CAF40YNL288W CLB4P24871 460 aa5.61□□□□□ -1.51
CAF40YNL288W CPR3P25719 182 aa5.61□□□□□ -1.51
CAF40YNL288W YIM1P28625 365 aa5.61□□□□□ -1.51
CAF40YNL288W SER3P40054 469 aa5.61□□□□□ -1.51
CAF40YNL288W SNM1P40993 198 aa5.61□□□□□ -1.51
CAF40YNL288W SWP1Q02795 286 aa5.61□□□□□ -1.51
CAF40YNL288W RRN5Q02983 363 aa5.61□□□□□ -1.51
CAF40YNL288W YAP6Q03935 383 aa5.61□□□□□ -1.51
CAF40YNL288W KRE28Q04431 385 aa5.61□□□□□ -1.51
CAF40YNL288W YPS7Q06325 596 aa5.61□□□□□ -1.51
CAF40YNL288W DCI1Q08558 271 aa5.61□□□□□ -1.51
CAF40YNL288W YOR376WQ08900 122 aa5.61□□□□□ -1.51
CAF40YNL288W PSF1Q12488 208 aa5.61□□□□□ -1.51
CAF40YNL288W GPH1P06738 902 aaKnown RBP5.6□□□□□ -1.51
CAF40YNL288W YCR102CP25608 368 aa5.6□□□□□ -1.51
CAF40YNL288W CWH43P25618 953 aa5.6□□□□□ -1.51
CAF40YNL288W NAM9P27929 486 aa5.6□□□□□ -1.51
CAF40YNL288W HCS1P34243 683 aa5.6□□□□□ -1.51
CAF40YNL288W SHM2P37291 469 aaKnown RBP5.6□□□□□ -1.51
CAF40YNL288W EXO84P38261 753 aa5.6□□□□□ -1.51
CAF40YNL288W PZF1P39933 429 aa5.6□□□□□ -1.51
CAF40YNL288W GID8P40208 455 aa5.6□□□□□ -1.51
CAF40YNL288W MPM1P40364 252 aa5.6□□□□□ -1.51
CAF40YNL288W MET28P40573 187 aa5.6□□□□□ -1.51
CAF40YNL288W SHR5P41912 237 aa5.6□□□□□ -1.51
CAF40YNL288W SNO3P43544 222 aa5.6□□□□□ -1.51
CAF40YNL288W FMP33P46998 180 aa5.6□□□□□ -1.51
CAF40YNL288W RMR1P53060 241 aa5.6□□□□□ -1.51
CAF40YNL288W ERP6P53198 216 aa5.6□□□□□ -1.51
CAF40YNL288W ALG12P53730 551 aa5.6□□□□□ -1.51
CAF40YNL288W YNL181WP53878 407 aa5.6□□□□□ -1.51
CAF40YNL288W SUR7P54003 302 aa5.6□□□□□ -1.51
CAF40YNL288W SPR6Q01684 191 aa5.6□□□□□ -1.51
CAF40YNL288W ATP25Q03153 612 aa5.6□□□□□ -1.51
CAF40YNL288W NUP53Q03790 475 aa5.6□□□□□ -1.51
CAF40YNL288W URC2Q04411 772 aa5.6□□□□□ -1.51
CAF40YNL288W NDL1Q06568 189 aa5.6□□□□□ -1.51
CAF40YNL288W REH1Q06709 432 aa5.6□□□□□ -1.51
CAF40YNL288W PSY3Q12318 242 aa5.6□□□□□ -1.51
CAF40YNL288W YOL159C-AQ3E769 90 aa5.6□□□□□ -1.51
CAF40YNL288W YOR032W-AQ8TGS1 66 aa5.6□□□□□ -1.51
CAF40YNL288W SUI3P09064 285 aaKnown RBP5.59□□□□□ -1.51
CAF40YNL288W KSS1P14681 368 aa5.59□□□□□ -1.51
CAF40YNL288W NTG1P31378 399 aa5.59□□□□□ -1.51
CAF40YNL288W APE2P32454 952 aaKnown RBP5.59□□□□□ -1.51
CAF40YNL288W EMP70P32802 667 aa5.59□□□□□ -1.51
CAF40YNL288W SPC34P36131 295 aa5.59□□□□□ -1.51
CAF40YNL288W ANS1P38832 159 aa5.59□□□□□ -1.51
CAF40YNL288W RCY1P39531 840 aa5.59□□□□□ -1.51
CAF40YNL288W SEC24P40482 926 aaKnown RBP5.59□□□□□ -1.51
CAF40YNL288W SMK1P41808 388 aa5.59□□□□□ -1.51
CAF40YNL288W IRC6P43615 237 aa5.59□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 42.1 ms