RNA–Protein interactions for RNA: YNL224C

SQS1, Transcript of Protein that stimulates the ATPase and helicase activities of Prp43p, yeast

Gene SQS1, Length 2,304 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SQS1	YNL224C	GLC8	P41818	229 aa		3.13	□□□□□ -1.91
SQS1	YNL224C	YGR210C	P42942	411 aa		3.13	□□□□□ -1.91
SQS1	YNL224C	SBH2	P52871	88 aa		3.13	□□□□□ -1.91
SQS1	YNL224C	YPR003C	P53394	754 aa		3.13	□□□□□ -1.91
SQS1	YNL224C	YNR062C	P53748	327 aa		3.13	□□□□□ -1.91
SQS1	YNL224C	YLR460C	P54007	376 aa		3.13	□□□□□ -1.91
SQS1	YNL224C	TPS1	Q00764	495 aa	Known RBP	3.13	□□□□□ -1.91
SQS1	YNL224C	AAT1	Q01802	451 aa		3.13	□□□□□ -1.91
SQS1	YNL224C	TRM82	Q03774	444 aa		3.13	□□□□□ -1.91
SQS1	YNL224C	GPI17	Q04080	534 aa		3.13	□□□□□ -1.91
SQS1	YNL224C	MRPL51	Q06090	140 aa	Predicted RBP	3.13	□□□□□ -1.91
SQS1	YNL224C	RIM20	Q12033	661 aa		3.13	□□□□□ -1.91
SQS1	YNL224C	YLR046C	Q12253	270 aa		3.13	□□□□□ -1.91
SQS1	YNL224C	AIM45	Q12480	344 aa	Known RBP	3.13	□□□□□ -1.91
SQS1	YNL224C	KCS1	Q12494	1050 aa		3.13	□□□□□ -1.91
SQS1	YNL224C	YKL183C-A	Q3E765	70 aa		3.13	□□□□□ -1.91
SQS1	YNL224C	COB	P00163	385 aa		3.12	□□□□□ -1.91
SQS1	YNL224C	CDC28	P00546	298 aa	Known RBP	3.12	□□□□□ -1.91
SQS1	YNL224C	TPI1	P00942	248 aa	Known RBP	3.12	□□□□□ -1.91
SQS1	YNL224C	ADK1	P07170	222 aa	Known RBP	3.12	□□□□□ -1.91
SQS1	YNL224C	PHO13	P19881	312 aa		3.12	□□□□□ -1.91
SQS1	YNL224C	PHO80	P20052	293 aa		3.12	□□□□□ -1.91
SQS1	YNL224C	BET2	P20133	325 aa		3.12	□□□□□ -1.91
SQS1	YNL224C	CAT2	P32796	670 aa	Known RBP	3.12	□□□□□ -1.91
SQS1	YNL224C	YKR051W	P36142	418 aa		3.12	□□□□□ -1.91
SQS1	YNL224C	UTP30	P36144	274 aa	Known RBP	3.12	□□□□□ -1.91
SQS1	YNL224C	TCM62	P38228	572 aa	Known RBP	3.12	□□□□□ -1.91
SQS1	YNL224C	TOS1	P38288	455 aa		3.12	□□□□□ -1.91
SQS1	YNL224C	VPS52	P39904	641 aa		3.12	□□□□□ -1.91
SQS1	YNL224C	PGD1	P40356	397 aa		3.12	□□□□□ -1.91
SQS1	YNL224C	YIR035C	P40579	254 aa		3.12	□□□□□ -1.91
SQS1	YNL224C	GNA1	P43577	159 aa	Predicted RBP	3.12	□□□□□ -1.91
SQS1	YNL224C	RPA43	P46669	326 aa		3.12	□□□□□ -1.91
SQS1	YNL224C	DOC1	P53068	250 aa		3.12	□□□□□ -1.91
SQS1	YNL224C	NAM8	Q00539	523 aa	Known RBP	3.12	□□□□□ -1.91
SQS1	YNL224C	YDR124W	Q04608	324 aa		3.12	□□□□□ -1.91
SQS1	YNL224C	ENT4	Q07872	247 aa		3.12	□□□□□ -1.91
SQS1	YNL224C	OXR1	Q08952	273 aa		3.12	□□□□□ -1.91
SQS1	YNL224C	POM33	Q12164	279 aa		3.12	□□□□□ -1.91
SQS1	YNL224C	RKI1	Q12189	258 aa		3.12	□□□□□ -1.91
SQS1	YNL224C	PKH2	Q12236	1081 aa	Known RBP	3.12	□□□□□ -1.91
SQS1	YNL224C	HRT3	Q12347	344 aa		3.12	□□□□□ -1.91
SQS1	YNL224C	EFG1	Q3E705	233 aa	Known RBP	3.12	□□□□□ -1.91
SQS1	YNL224C	DFG16	Q99234	619 aa		3.12	□□□□□ -1.91
SQS1	YNL224C	PUT1	P09368	476 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	DDI2	P0CH63	225 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	DDI3	P0CH64	225 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	CPT1	P17898	393 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	NFS1	P25374	497 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	DEG1	P31115	442 aa	Known RBP	3.11	□□□□□ -1.91
SQS1	YNL224C	AEP1	P32493	518 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	MRPL4	P36517	319 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	FLR1	P38124	548 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	YBL086C	P38177	466 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	SMB1	P40018	196 aa	Known RBP	3.11	□□□□□ -1.91
SQS1	YNL224C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	3.11	□□□□□ -1.91	not detected
SQS1	YNL224C	MRPL49	P40858	161 aa	Predicted RBP	3.11	□□□□□ -1.91
SQS1	YNL224C	MRX5	P47007	382 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	FLC3	P53121	802 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	VPS73	P53142	486 aa	Known RBP	3.11	□□□□□ -1.91
SQS1	YNL224C	YGR017W	P53210	297 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	SMX3	P54999	86 aa	Predicted RBP	3.11	□□□□□ -1.91
SQS1	YNL224C	YCL001W-A	P87012	153 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	KIN4	Q01919	800 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	ODC1	Q03028	310 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	RKM2	Q03942	479 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	CTK1	Q03957	528 aa	Known RBP	3.11	□□□□□ -1.91
SQS1	YNL224C	LEA1	Q08963	238 aa	Predicted RBP	3.11	□□□□□ -1.91
SQS1	YNL224C	YPL257W	Q08974	193 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	YPR027C	Q12079	277 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	RRI1	Q12468	440 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	TSC13	Q99190	310 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	KRE5	P22023	1365 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	PSK1	P31374	1356 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	LTE1	P07866	1435 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	MDS3	P53094	1487 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	RAD10	P06838	210 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	ATP10	P18496	279 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	SPO11	P23179	398 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	ELO2	P25358	347 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	LDS1	P31379	325 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	VMA5	P31412	392 aa	Known RBP	3.11	□□□□□ -1.91
SQS1	YNL224C	RAD23	P32628	398 aa	Known RBP	3.11	□□□□□ -1.91
SQS1	YNL224C	UGP1	P32861	499 aa	Known RBP	3.11	□□□□□ -1.91
SQS1	YNL224C	PRX1	P34227	261 aa	Known RBP	3.11	□□□□□ -1.91
SQS1	YNL224C	RER2	P35196	286 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	YKL162C	P36052	402 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	BNA4	P38169	460 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	EXO5	P38289	585 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	MIC12	P38341	106 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	SRP14	P38985	146 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	YNL194C	P40169	301 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	YFL054C	P43549	646 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	GUF1	P46943	645 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	ZAP1	P47043	880 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	YJL043W	P47053	257 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	GPI14	P47088	403 aa	Known RBP	3.11	□□□□□ -1.91
SQS1	YNL224C	YPT11	P48559	417 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	NIF3	P53081	288 aa		3.11	□□□□□ -1.91
SQS1	YNL224C	STD1	Q02794	444 aa		3.11	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms