RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A GLG2P47011 380 aa3.09□□□□□ -1.91
YSF3YNL138W-A RSC1P53236 928 aa3.09□□□□□ -1.91
YSF3YNL138W-A DON1Q05610 365 aa3.09□□□□□ -1.91
YSF3YNL138W-A MUM3Q08750 479 aa3.09□□□□□ -1.91
YSF3YNL138W-A YDR262WQ12331 272 aa3.09□□□□□ -1.91
YSF3YNL138W-A ISN1Q99312 450 aa3.09□□□□□ -1.91
YSF3YNL138W-A CPR4P25334 318 aa3.08□□□□□ -1.92
YSF3YNL138W-A TIP1P27654 210 aaPredicted RBP3.08□□□□□ -1.92
YSF3YNL138W-A NAM9P27929 486 aa3.08□□□□□ -1.92
YSF3YNL138W-A DEG1P31115 442 aaKnown RBP3.08□□□□□ -1.92
YSF3YNL138W-A YME2P32843 850 aa3.08□□□□□ -1.92
YSF3YNL138W-A RFC3P38629 340 aa3.08□□□□□ -1.92
YSF3YNL138W-A YAL037WP39728 267 aa3.08□□□□□ -1.92
YSF3YNL138W-A ECM27P47144 725 aa3.08□□□□□ -1.92
YSF3YNL138W-A FRE4P53746 719 aa3.08□□□□□ -1.92
YSF3YNL138W-A MRP51Q02950 344 aa3.08□□□□□ -1.92
YSF3YNL138W-A YDR131CQ03899 556 aa3.08□□□□□ -1.92
YSF3YNL138W-A AIM32Q04689 311 aa3.08□□□□□ -1.92
YSF3YNL138W-A RRP45Q05636 305 aaKnown RBP3.08□□□□□ -1.92
YSF3YNL138W-A PBA1Q05778 276 aa3.08□□□□□ -1.92
YSF3YNL138W-A MDM30Q05930 598 aa3.08□□□□□ -1.92
YSF3YNL138W-A ESA1Q08649 445 aa3.08□□□□□ -1.92
YSF3YNL138W-A VAM3Q12241 283 aa3.08□□□□□ -1.92
YSF3YNL138W-A HSP82P02829 709 aaKnown RBP3.07□□□□□ -1.92
YSF3YNL138W-A YKR104WP0CE69 306 aa3.07□□□□□ -1.92
YSF3YNL138W-A URA4P20051 364 aa3.07□□□□□ -1.92
YSF3YNL138W-A YCR051WP25631 222 aa3.07□□□□□ -1.92
YSF3YNL138W-A SPR1P32603 445 aa3.07□□□□□ -1.92
YSF3YNL138W-A YBL059WP34224 193 aa3.07□□□□□ -1.92
YSF3YNL138W-A RIB5P38145 238 aa3.07□□□□□ -1.92
YSF3YNL138W-A MIX23P38162 196 aa3.07□□□□□ -1.92
YSF3YNL138W-A MST28P39552 234 aa3.07□□□□□ -1.92
YSF3YNL138W-A WWM1P43582 211 aaKnown RBP3.07□□□□□ -1.92
YSF3YNL138W-A IBD2P53892 351 aa3.07□□□□□ -1.92
YSF3YNL138W-A ARP5P53946 755 aa3.07□□□□□ -1.92
YSF3YNL138W-A VAC7P53950 1165 aa3.07□□□□□ -1.92
YSF3YNL138W-A TIM8P57744 87 aa3.07□□□□□ -1.92
YSF3YNL138W-A ELP3Q02908 557 aaKnown RBP3.07□□□□□ -1.92
YSF3YNL138W-A ROY1Q04847 553 aa3.07□□□□□ -1.92
YSF3YNL138W-A APC5Q08683 685 aa3.07□□□□□ -1.92
YSF3YNL138W-A TIM18Q08749 192 aa3.07□□□□□ -1.92
YSF3YNL138W-A ERV2Q12284 196 aa3.07□□□□□ -1.92
YSF3YNL138W-A PEX11Q12462 236 aa3.07□□□□□ -1.92
YSF3YNL138W-A RRP12Q12754 1228 aaKnown RBP3.07□□□□□ -1.92
YSF3YNL138W-A NBL1Q3E7Y6 73 aa3.07□□□□□ -1.92
YSF3YNL138W-A PAB1P04147 577 aaKnown RBP RIP-Chip data3.06□□□□□ -1.92 RIP-Chip
YSF3YNL138W-A OM45P16547 393 aa3.06□□□□□ -1.92
YSF3YNL138W-A SRV2P17555 526 aaKnown RBP3.06□□□□□ -1.92
YSF3YNL138W-A CLC1P17891 233 aa3.06□□□□□ -1.92
YSF3YNL138W-A SCL1P21243 252 aaKnown RBP3.06□□□□□ -1.92
YSF3YNL138W-A RHB1P25378 209 aa3.06□□□□□ -1.92
YSF3YNL138W-A HIR2P32480 875 aa3.06□□□□□ -1.92
YSF3YNL138W-A STB6P36085 766 aa3.06□□□□□ -1.92
YSF3YNL138W-A NTC20P38302 140 aaPredicted RBP3.06□□□□□ -1.92
YSF3YNL138W-A SPT8P38915 602 aa3.06□□□□□ -1.92
YSF3YNL138W-A LYS1P38998 373 aaRIP-Chip data3.06□□□□□ -1.92not detected
YSF3YNL138W-A SSU1P41930 458 aa3.06□□□□□ -1.92
YSF3YNL138W-A NCA3P46955 337 aa3.06□□□□□ -1.92
YSF3YNL138W-A YJR011CP47086 261 aaPredicted RBP3.06□□□□□ -1.92
YSF3YNL138W-A CPR7P47103 393 aa3.06□□□□□ -1.92
YSF3YNL138W-A COS5P47187 383 aa3.06□□□□□ -1.92
YSF3YNL138W-A HXT11P54862 567 aa3.06□□□□□ -1.92
YSF3YNL138W-A RRN11Q04712 507 aa3.06□□□□□ -1.92
YSF3YNL138W-A TAF9Q05027 157 aa3.06□□□□□ -1.92
YSF3YNL138W-A COS7Q07788 383 aa3.06□□□□□ -1.92
YSF3YNL138W-A DIS3Q08162 1001 aaKnown RBP3.06□□□□□ -1.92
YSF3YNL138W-A YLR108CQ12259 485 aa3.06□□□□□ -1.92
YSF3YNL138W-A ORT1Q12375 292 aa3.06□□□□□ -1.92
YSF3YNL138W-A HHF1P02309 103 aaKnown RBP3.05□□□□□ -1.92
YSF3YNL138W-A ILV5P06168 395 aaKnown RBP3.05□□□□□ -1.92
YSF3YNL138W-A BCY1P07278 416 aaKnown RBP3.05□□□□□ -1.92
YSF3YNL138W-A REC107P21651 314 aa3.05□□□□□ -1.92
YSF3YNL138W-A SLY1P22213 666 aa3.05□□□□□ -1.92
YSF3YNL138W-A GRR1P24814 1151 aa3.05□□□□□ -1.92
YSF3YNL138W-A PSO2P30620 661 aa3.05□□□□□ -1.92
YSF3YNL138W-A NIP1P32497 812 aaKnown RBP3.05□□□□□ -1.92
YSF3YNL138W-A TOA1P32773 286 aa3.05□□□□□ -1.92
YSF3YNL138W-A CDC13P32797 924 aaKnown RBP3.05□□□□□ -1.92
YSF3YNL138W-A SOR1P35497 357 aaKnown RBP3.05□□□□□ -1.92
YSF3YNL138W-A YBR137WP38276 179 aa3.05□□□□□ -1.92
YSF3YNL138W-A SDS24P38314 527 aa3.05□□□□□ -1.92
YSF3YNL138W-A SER3P40054 469 aa3.05□□□□□ -1.92
YSF3YNL138W-A PAN6P40459 309 aa3.05□□□□□ -1.92
YSF3YNL138W-A HMS2P47175 358 aa3.05□□□□□ -1.92
YSF3YNL138W-A SSN8P47821 323 aa3.05□□□□□ -1.92
YSF3YNL138W-A MND1P53102 219 aa3.05□□□□□ -1.92
YSF3YNL138W-A RTC4P53850 401 aa3.05□□□□□ -1.92
YSF3YNL138W-A ARO80Q04052 950 aa3.05□□□□□ -1.92
YSF3YNL138W-A PPM1Q04081 328 aa3.05□□□□□ -1.92
YSF3YNL138W-A MRPL35Q06678 367 aa3.05□□□□□ -1.92
YSF3YNL138W-A SOR2Q07786 357 aa3.05□□□□□ -1.92
YSF3YNL138W-A YLR030WQ07967 263 aa3.05□□□□□ -1.92
YSF3YNL138W-A VPS68Q12016 184 aa3.05□□□□□ -1.92
YSF3YNL138W-A AFI1Q99222 893 aa3.05□□□□□ -1.92
YSF3YNL138W-A AI5_BETAQ9ZZX0 354 aa3.05□□□□□ -1.92
YSF3YNL138W-A CDC39P25655 2108 aaKnown RBP3.05□□□□□ -1.92
YSF3YNL138W-A MRPL8P22353 238 aa3.04□□□□□ -1.92
YSF3YNL138W-A ERV1P27882 189 aa3.04□□□□□ -1.92
YSF3YNL138W-A DBF4P32325 704 aa3.04□□□□□ -1.92
YSF3YNL138W-A RPS0AP32905 252 aaKnown RBP3.04□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms