RNA–Protein interactions for RNA: YNL022C

RCM1, Transcript of rRNA m5C methyltransferase, yeast

Gene RCM1, Length 1,473 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCM1	YNL022C	SMM1	P53720	384 aa	Known RBP	4.11	□□□□□ -1.75
RCM1	YNL022C	YDR541C	Q03049	344 aa		4.11	□□□□□ -1.75
RCM1	YNL022C	ATC1	Q04005	294 aa		4.11	□□□□□ -1.75
RCM1	YNL022C	NRT1	Q08485	598 aa		4.11	□□□□□ -1.75
RCM1	YNL022C	YLR053C	Q12026	108 aa		4.11	□□□□□ -1.75
RCM1	YNL022C	YLR111W	Q12528	110 aa		4.11	□□□□□ -1.75
RCM1	YNL022C	SRN2	Q99176	213 aa		4.11	□□□□□ -1.75
RCM1	YNL022C	ARG80	P07249	177 aa		4.11	□□□□□ -1.75
RCM1	YNL022C	SCH9	P11792	824 aa	Known RBP	4.11	□□□□□ -1.75
RCM1	YNL022C	GCD2	P12754	651 aa	Predicted RBP	4.11	□□□□□ -1.75
RCM1	YNL022C	ATP10	P18496	279 aa		4.11	□□□□□ -1.75
RCM1	YNL022C	RPB8	P20436	146 aa		4.11	□□□□□ -1.75
RCM1	YNL022C	NUP1	P20676	1076 aa		4.11	□□□□□ -1.75
RCM1	YNL022C	SGV1	P23293	657 aa	Known RBP	4.11	□□□□□ -1.75
RCM1	YNL022C	CLB2	P24869	491 aa		4.11	□□□□□ -1.75
RCM1	YNL022C	URA10	P30402	227 aa		4.11	□□□□□ -1.75
RCM1	YNL022C	SUA5	P32579	426 aa		4.11	□□□□□ -1.75
RCM1	YNL022C	RPT5	P33297	434 aa	Known RBP	4.11	□□□□□ -1.75
RCM1	YNL022C	RFS1	P38234	210 aa	Known RBP	4.11	□□□□□ -1.75
RCM1	YNL022C	YHR210C	P38893	341 aa		4.11	□□□□□ -1.75
RCM1	YNL022C	PCF11	P39081	626 aa	Predicted RBP	4.11	□□□□□ -1.75
RCM1	YNL022C	PRM9	P39551	298 aa		4.11	□□□□□ -1.75
RCM1	YNL022C	YAT2	P40017	923 aa		4.11	□□□□□ -1.75
RCM1	YNL022C	SNO3	P43544	222 aa		4.11	□□□□□ -1.75
RCM1	YNL022C	LYS20	P48570	428 aa	Known RBP	4.11	□□□□□ -1.75
RCM1	YNL022C	ASN2	P49090	572 aa	Known RBP	4.11	□□□□□ -1.75
RCM1	YNL022C	ROG1	P53118	685 aa		4.11	□□□□□ -1.75
RCM1	YNL022C	DSL1	P53847	754 aa		4.11	□□□□□ -1.75
RCM1	YNL022C	RNY1	Q02933	434 aa	Known RBP	4.11	□□□□□ -1.75
RCM1	YNL022C	SEG1	Q04279	960 aa		4.11	□□□□□ -1.75
RCM1	YNL022C	MSC3	Q05812	728 aa		4.11	□□□□□ -1.75
RCM1	YNL022C	ARR2	Q06597	130 aa		4.11	□□□□□ -1.75
RCM1	YNL022C	CMS1	Q07897	291 aa	Known RBP	4.11	□□□□□ -1.75
RCM1	YNL022C	RDR1	Q08904	546 aa		4.11	□□□□□ -1.75
RCM1	YNL022C	YOL107W	Q12239	342 aa		4.11	□□□□□ -1.75
RCM1	YNL022C	EFG1	Q3E705	233 aa	Known RBP	4.11	□□□□□ -1.75
RCM1	YNL022C	CBP2	P03874	630 aa	Predicted RBP	4.1	□□□□□ -1.75
RCM1	YNL022C	LEU4	P06208	619 aa	Known RBP	4.1	□□□□□ -1.75
RCM1	YNL022C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
RCM1	YNL022C	RRN10	P38204	145 aa		4.1	□□□□□ -1.75
RCM1	YNL022C	TCM62	P38228	572 aa	Known RBP	4.1	□□□□□ -1.75
RCM1	YNL022C	RFC3	P38629	340 aa		4.1	□□□□□ -1.75
RCM1	YNL022C	MNN9	P39107	395 aa	Known RBP	4.1	□□□□□ -1.75
RCM1	YNL022C	ERV46	P39727	415 aa		4.1	□□□□□ -1.75
RCM1	YNL022C	YEL028W	P39989	153 aa		4.1	□□□□□ -1.75
RCM1	YNL022C	EDC3	P39998	551 aa	Known RBP	4.1	□□□□□ -1.75
RCM1	YNL022C	CIN1	P40987	1014 aa		4.1	□□□□□ -1.75
RCM1	YNL022C	PNC1	P53184	216 aa	Known RBP	4.1	□□□□□ -1.75
RCM1	YNL022C	SLT2	Q00772	484 aa		4.1	□□□□□ -1.75
RCM1	YNL022C	HER2	Q03557	464 aa		4.1	□□□□□ -1.75
RCM1	YNL022C	NDL1	Q06568	189 aa		4.1	□□□□□ -1.75
RCM1	YNL022C	SWC7	Q06707	132 aa		4.1	□□□□□ -1.75
RCM1	YNL022C	AAD15	Q08361	143 aa		4.1	□□□□□ -1.75
RCM1	YNL022C	SLD7	Q08457	257 aa		4.1	□□□□□ -1.75
RCM1	YNL022C	VPS63	O13549	108 aa		4.09	□□□□□ -1.75
RCM1	YNL022C	CDC36	P06100	191 aa	Predicted RBP	4.09	□□□□□ -1.75
RCM1	YNL022C	GPA2	P10823	449 aa		4.09	□□□□□ -1.75
RCM1	YNL022C	TYR1	P20049	452 aa		4.09	□□□□□ -1.75
RCM1	YNL022C	URE2	P23202	354 aa	Known RBP	4.09	□□□□□ -1.75
RCM1	YNL022C	SEC14	P24280	304 aa	Known RBP	4.09	□□□□□ -1.75
RCM1	YNL022C	YCL068C	P25593	260 aa		4.09	□□□□□ -1.75
RCM1	YNL022C	SIN4	P32259	974 aa		4.09	□□□□□ -1.75
RCM1	YNL022C	CYM1	P32898	989 aa		4.09	□□□□□ -1.75
RCM1	YNL022C	URA8	P38627	578 aa	Predicted RBP	4.09	□□□□□ -1.75
RCM1	YNL022C	VRG4	P40107	337 aa		4.09	□□□□□ -1.75
RCM1	YNL022C	PEP8	P40335	379 aa		4.09	□□□□□ -1.75
RCM1	YNL022C	IAH1	P41734	238 aa		4.09	□□□□□ -1.75
RCM1	YNL022C	IRC7	P43623	340 aa		4.09	□□□□□ -1.75
RCM1	YNL022C	EFM3	P47163	339 aa		4.09	□□□□□ -1.75
RCM1	YNL022C	UBP8	P50102	471 aa		4.09	□□□□□ -1.75
RCM1	YNL022C	PYK2	P52489	506 aa	Known RBP	4.09	□□□□□ -1.75
RCM1	YNL022C	TAF6	P53040	516 aa		4.09	□□□□□ -1.75
RCM1	YNL022C	URC2	Q04411	772 aa		4.09	□□□□□ -1.75
RCM1	YNL022C	RRN11	Q04712	507 aa		4.09	□□□□□ -1.75
RCM1	YNL022C	POS5	Q06892	414 aa		4.09	□□□□□ -1.75
RCM1	YNL022C	TAD3	Q9URQ3	322 aa		4.09	□□□□□ -1.75
RCM1	YNL022C	COX5A	P00424	153 aa		4.08	□□□□□ -1.76
RCM1	YNL022C	HIS1	P00498	297 aa	Known RBP	4.08	□□□□□ -1.76
RCM1	YNL022C	SCEI	P03882	235 aa		4.08	□□□□□ -1.76
RCM1	YNL022C	ATP1	P07251	545 aa	Known RBP	4.08	□□□□□ -1.76
RCM1	YNL022C	MAS1	P10507	462 aa		4.08	□□□□□ -1.76
RCM1	YNL022C	DAL81	P21657	970 aa		4.08	□□□□□ -1.76
RCM1	YNL022C	MEI5	P32489	222 aa		4.08	□□□□□ -1.76
RCM1	YNL022C	MSN2	P33748	704 aa		4.08	□□□□□ -1.76
RCM1	YNL022C	MED8	P38304	223 aa		4.08	□□□□□ -1.76
RCM1	YNL022C	ARN1	P38731	627 aa		4.08	□□□□□ -1.76
RCM1	YNL022C	UBA4	P38820	440 aa		4.08	□□□□□ -1.76
RCM1	YNL022C	BZZ1	P38822	633 aa		4.08	□□□□□ -1.76
RCM1	YNL022C	SSO2	P39926	295 aa		4.08	□□□□□ -1.76
RCM1	YNL022C	YRB2	P40517	327 aa		4.08	□□□□□ -1.76
RCM1	YNL022C	YIL060W	P40519	144 aa		4.08	□□□□□ -1.76
RCM1	YNL022C	YIR016W	P40572	265 aa		4.08	□□□□□ -1.76
RCM1	YNL022C	YHC3	P47040	408 aa		4.08	□□□□□ -1.76
RCM1	YNL022C	TMA22	P47089	198 aa	Predicted RBP	4.08	□□□□□ -1.76
RCM1	YNL022C	IMD3	P50095	523 aa	Known RBP	4.08	□□□□□ -1.76
RCM1	YNL022C	MPS2	P53159	387 aa		4.08	□□□□□ -1.76
RCM1	YNL022C	TIM13	P53299	105 aa		4.08	□□□□□ -1.76
RCM1	YNL022C	TRM112	P53738	135 aa	Predicted RBP	4.08	□□□□□ -1.76
RCM1	YNL022C	ASI1	P54074	624 aa		4.08	□□□□□ -1.76
RCM1	YNL022C	PIR3	Q03180	325 aa		4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms