RNA–Protein interactions for RNA: YMR309C

NIP1, Transcript of eIF3c subunit of the eukaryotic translation initiation factor 3 (eIF3), yeastyeast

Gene NIP1, Length 2,439 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP1YMR309C SPO73P40031 143 aa0.35□□□□□ -2.35
NIP1YMR309C SER3P40054 469 aa0.35□□□□□ -2.35
NIP1YMR309C PAC11P40960 533 aa0.35□□□□□ -2.35
NIP1YMR309C CIN2P46670 268 aa0.35□□□□□ -2.35
NIP1YMR309C AIM23P47015 356 aa0.35□□□□□ -2.35
NIP1YMR309C YGR015CP53208 328 aa0.35□□□□□ -2.35
NIP1YMR309C YGR111WP53265 400 aa0.35□□□□□ -2.35
NIP1YMR309C NRM1P53718 249 aa0.35□□□□□ -2.35
NIP1YMR309C MIX17Q03667 156 aa0.35□□□□□ -2.35
NIP1YMR309C API2Q04413 109 aa0.35□□□□□ -2.35
NIP1YMR309C YDR114CQ04597 100 aa0.35□□□□□ -2.35
NIP1YMR309C ERB1Q04660 807 aaKnown RBP0.35□□□□□ -2.35
NIP1YMR309C YLR456WQ06199 204 aa0.35□□□□□ -2.35
NIP1YMR309C DCI1Q08558 271 aa0.35□□□□□ -2.35
NIP1YMR309C YDL211CQ12121 372 aa0.35□□□□□ -2.35
NIP1YMR309C MCT1Q12283 360 aa0.35□□□□□ -2.35
NIP1YMR309C RPS14AP06367 137 aaKnown RBP0.34□□□□□ -2.35
NIP1YMR309C CDC31P06704 161 aaKnown RBP0.34□□□□□ -2.35
NIP1YMR309C RPL23AP0CX41 137 aaKnown RBP0.34□□□□□ -2.35
NIP1YMR309C RPL23BP0CX42 137 aaKnown RBP0.34□□□□□ -2.35
NIP1YMR309C RPL12AP0CX53 165 aaKnown RBP0.34□□□□□ -2.35
NIP1YMR309C RPL12BP0CX54 165 aa0.34□□□□□ -2.35
NIP1YMR309C SCH9P11792 824 aaKnown RBP0.34□□□□□ -2.35
NIP1YMR309C MRPL8P22353 238 aa0.34□□□□□ -2.35
NIP1YMR309C ADK2P26364 225 aa0.34□□□□□ -2.35
NIP1YMR309C URA7P28274 579 aaKnown RBP0.34□□□□□ -2.35
NIP1YMR309C NFU1P32860 256 aa0.34□□□□□ -2.35
NIP1YMR309C YPT35P38815 214 aaKnown RBP0.34□□□□□ -2.35
NIP1YMR309C YHR182WP38870 785 aa0.34□□□□□ -2.35
NIP1YMR309C MNL1P38888 796 aa0.34□□□□□ -2.35
NIP1YMR309C RPS14BP39516 138 aaKnown RBP0.34□□□□□ -2.35
NIP1YMR309C UFE1P41834 346 aa0.34□□□□□ -2.35
NIP1YMR309C BUD13P46947 266 aaPredicted RBP0.34□□□□□ -2.35
NIP1YMR309C YJR030CP47101 745 aa0.34□□□□□ -2.35
NIP1YMR309C YJR054WP47114 497 aa0.34□□□□□ -2.35
NIP1YMR309C TOM22P49334 152 aa0.34□□□□□ -2.35
NIP1YMR309C MDM1Q01846 1127 aa0.34□□□□□ -2.35
NIP1YMR309C RMT2Q03305 412 aa0.34□□□□□ -2.35
NIP1YMR309C PRP3Q03338 469 aaPredicted RBP0.34□□□□□ -2.35
NIP1YMR309C SPC19Q03954 165 aa0.34□□□□□ -2.35
NIP1YMR309C SHS1Q07657 551 aa0.34□□□□□ -2.35
NIP1YMR309C AAD15Q08361 143 aa0.34□□□□□ -2.35
NIP1YMR309C BUD21Q08492 214 aaPredicted RBP0.34□□□□□ -2.35
NIP1YMR309C MMT2Q08970 484 aa0.34□□□□□ -2.35
NIP1YMR309C SCM3Q12334 223 aa0.34□□□□□ -2.35
NIP1YMR309C RNH203Q12338 110 aa0.34□□□□□ -2.35
NIP1YMR309C RPS23AP0CX29 145 aaKnown RBP0.34□□□□□ -2.36
NIP1YMR309C RPS23BP0CX30 145 aa0.34□□□□□ -2.36
NIP1YMR309C CUP2P15315 225 aa0.34□□□□□ -2.36
NIP1YMR309C DAL5P15365 543 aa0.34□□□□□ -2.36
NIP1YMR309C MDH1P17505 334 aaKnown RBP RIP-Chip data0.34□□□□□ -2.36not detected
NIP1YMR309C CPR2P23285 205 aa0.34□□□□□ -2.36
NIP1YMR309C MIR1P23641 311 aaKnown RBP0.34□□□□□ -2.36
NIP1YMR309C CHA1P25379 360 aaKnown RBP0.34□□□□□ -2.36
NIP1YMR309C URA10P30402 227 aa0.34□□□□□ -2.36
NIP1YMR309C ITR2P30606 609 aa0.34□□□□□ -2.36
NIP1YMR309C SSE1P32589 693 aaKnown RBP0.34□□□□□ -2.36
NIP1YMR309C TKL2P33315 681 aa0.34□□□□□ -2.36
NIP1YMR309C PEX5P35056 612 aa0.34□□□□□ -2.36
NIP1YMR309C YKL071WP36086 256 aa0.34□□□□□ -2.36
NIP1YMR309C YKR032WP36127 104 aa0.34□□□□□ -2.36
NIP1YMR309C SHE1P38200 338 aa0.34□□□□□ -2.36
NIP1YMR309C YMR262WP38430 313 aa0.34□□□□□ -2.36
NIP1YMR309C SCC4P40090 624 aa0.34□□□□□ -2.36
NIP1YMR309C COS4P43542 379 aa0.34□□□□□ -2.36
NIP1YMR309C TOS2P50078 622 aa0.34□□□□□ -2.36
NIP1YMR309C PMT5P52867 743 aa0.34□□□□□ -2.36
NIP1YMR309C RRN9P53437 365 aa0.34□□□□□ -2.36
NIP1YMR309C RGM1Q00453 211 aa0.34□□□□□ -2.36
NIP1YMR309C SED5Q01590 340 aa0.34□□□□□ -2.36
NIP1YMR309C VPS72Q03388 795 aa0.34□□□□□ -2.36
NIP1YMR309C URC2Q04411 772 aa0.34□□□□□ -2.36
NIP1YMR309C ARR1Q06596 294 aa0.34□□□□□ -2.36
NIP1YMR309C PGA3Q12746 312 aaKnown RBP0.34□□□□□ -2.36
NIP1YMR309C ISN1Q99312 450 aa0.34□□□□□ -2.36
NIP1YMR309C YOL085CQ99345 113 aa0.34□□□□□ -2.36
NIP1YMR309C CPT1P17898 393 aa0.33□□□□□ -2.36
NIP1YMR309C FRM2P37261 193 aa0.33□□□□□ -2.36
NIP1YMR309C PCH2P38126 564 aa0.33□□□□□ -2.36
NIP1YMR309C ATG12P38316 186 aa0.33□□□□□ -2.36
NIP1YMR309C MOB2P43563 287 aa0.33□□□□□ -2.36
NIP1YMR309C KEG1P43614 200 aa0.33□□□□□ -2.36
NIP1YMR309C ABM1P47146 123 aa0.33□□□□□ -2.36
NIP1YMR309C ASN2P49090 572 aaKnown RBP0.33□□□□□ -2.36
NIP1YMR309C RTT102P53330 157 aa0.33□□□□□ -2.36
NIP1YMR309C PRM1P53835 661 aa0.33□□□□□ -2.36
NIP1YMR309C YDR541CQ03049 344 aa0.33□□□□□ -2.36
NIP1YMR309C GYL1Q04322 720 aa0.33□□□□□ -2.36
NIP1YMR309C VTI1Q04338 217 aa0.33□□□□□ -2.36
NIP1YMR309C APC4Q04601 652 aa0.33□□□□□ -2.36
NIP1YMR309C YDR341CQ05506 607 aaKnown RBP0.33□□□□□ -2.36
NIP1YMR309C GAT3Q07928 141 aa0.33□□□□□ -2.36
NIP1YMR309C RNA1P11745 407 aaKnown RBP0.33□□□□□ -2.36
NIP1YMR309C PDX1P16451 410 aa0.33□□□□□ -2.36
NIP1YMR309C COX10P21592 462 aa0.33□□□□□ -2.36
NIP1YMR309C MSP1P28737 362 aa0.33□□□□□ -2.36
NIP1YMR309C CBF5P33322 483 aaKnown RBP RIP-Chip data0.33□□□□□ -2.36not detected
NIP1YMR309C YKR015CP36111 568 aa0.33□□□□□ -2.36
NIP1YMR309C YBL028CP38202 106 aa0.33□□□□□ -2.36
NIP1YMR309C SPP381P38282 291 aaPredicted RBP0.33□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms