RNA–Protein interactions for RNA: YMR176W

ECM5, Transcript of Subunit of the Snt2C complex, yeastyeast

Gene ECM5, Length 4,236 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM5YMR176W YPI1P43587 155 aa2.18□□□□□ -2.06
ECM5YMR176W YJR085CP47131 105 aaKnown RBP2.18□□□□□ -2.06
ECM5YMR176W MRM2P53123 320 aa2.18□□□□□ -2.06
ECM5YMR176W CWC25P53854 179 aaKnown RBP2.18□□□□□ -2.06
ECM5YMR176W ARO2P28777 376 aaKnown RBP2.18□□□□□ -2.06
ECM5YMR176W VAM7P32912 316 aa2.18□□□□□ -2.06
ECM5YMR176W SPG5P42933 373 aa2.18□□□□□ -2.06
ECM5YMR176W HHF1P02309 103 aaKnown RBP2.18□□□□□ -2.06
ECM5YMR176W CBS2P14905 389 aa2.18□□□□□ -2.06
ECM5YMR176W TRX1P22217 103 aaKnown RBP2.18□□□□□ -2.06
ECM5YMR176W COX14P39103 70 aa2.18□□□□□ -2.06
ECM5YMR176W PAN6P40459 309 aa2.18□□□□□ -2.06
ECM5YMR176W NUP116Q02630 1113 aa2.18□□□□□ -2.06
ECM5YMR176W PEX27Q08580 376 aa2.18□□□□□ -2.06
ECM5YMR176W AHC1Q12433 566 aa2.18□□□□□ -2.06
ECM5YMR176W THR4P16120 514 aaKnown RBP2.18□□□□□ -2.06
ECM5YMR176W MSK1P32048 576 aa2.18□□□□□ -2.06
ECM5YMR176W TDA1Q03533 586 aa2.18□□□□□ -2.06
ECM5YMR176W POP5P28005 173 aa2.17□□□□□ -2.06
ECM5YMR176W NDT80P38830 627 aa2.17□□□□□ -2.06
ECM5YMR176W LIN1P38852 340 aaPredicted RBP2.17□□□□□ -2.06
ECM5YMR176W CCT4P39078 528 aaKnown RBP2.17□□□□□ -2.06
ECM5YMR176W LCB3P47013 409 aa2.17□□□□□ -2.06
ECM5YMR176W GAT3Q07928 141 aa2.17□□□□□ -2.06
ECM5YMR176W YCR024C-BQ3E7Z8 88 aa2.17□□□□□ -2.06
ECM5YMR176W MAS2P11914 482 aa2.17□□□□□ -2.06
ECM5YMR176W TIR2P33890 251 aa2.17□□□□□ -2.06
ECM5YMR176W PTH1P38876 190 aaKnown RBP2.17□□□□□ -2.06
ECM5YMR176W POP2P39008 433 aa2.17□□□□□ -2.06
ECM5YMR176W PTI1P39927 425 aaPredicted RBP2.17□□□□□ -2.06
ECM5YMR176W CWC22P53333 577 aaKnown RBP2.17□□□□□ -2.06
ECM5YMR176W MGR3Q04472 501 aa2.17□□□□□ -2.06
ECM5YMR176W AIM33Q04516 312 aa2.17□□□□□ -2.06
ECM5YMR176W YGK3Q12222 375 aaPredicted RBP2.17□□□□□ -2.06
ECM5YMR176W FAR1P21268 830 aa2.17□□□□□ -2.06
ECM5YMR176W MNS1P32906 549 aa2.17□□□□□ -2.06
ECM5YMR176W YBL028CP38202 106 aa2.17□□□□□ -2.06
ECM5YMR176W LYS12P40495 371 aaKnown RBP2.17□□□□□ -2.06
ECM5YMR176W YIL089WP40500 205 aa2.17□□□□□ -2.06
ECM5YMR176W YGR210CP42942 411 aa2.17□□□□□ -2.06
ECM5YMR176W RRP46P53256 223 aaPredicted RBP2.17□□□□□ -2.06
ECM5YMR176W RRB1Q04225 511 aaKnown RBP2.17□□□□□ -2.06
ECM5YMR176W ZUO1P32527 433 aaKnown RBP2.16□□□□□ -2.06
ECM5YMR176W YIL029CP40538 142 aa2.16□□□□□ -2.06
ECM5YMR176W HRI1Q05905 244 aaKnown RBP2.16□□□□□ -2.06
ECM5YMR176W MAS1P10507 462 aa2.16□□□□□ -2.06
ECM5YMR176W CSE2P33308 149 aa2.16□□□□□ -2.06
ECM5YMR176W GEP4P38812 185 aa2.16□□□□□ -2.06
ECM5YMR176W PRM1P53835 661 aa2.16□□□□□ -2.06
ECM5YMR176W NDE2Q07500 545 aa2.16□□□□□ -2.06
ECM5YMR176W FSH3Q99369 266 aa2.16□□□□□ -2.06
ECM5YMR176W PDR11P40550 1411 aa2.16□□□□□ -2.06
ECM5YMR176W ISY1P21374 235 aaPredicted RBP2.16□□□□□ -2.06
ECM5YMR176W DEG1P31115 442 aaKnown RBP2.16□□□□□ -2.06
ECM5YMR176W SRB2P34162 210 aa2.16□□□□□ -2.06
ECM5YMR176W YMR102CQ03177 834 aa2.16□□□□□ -2.06
ECM5YMR176W ADH2P00331 348 aaKnown RBP2.15□□□□□ -2.06
ECM5YMR176W CHA1P25379 360 aaKnown RBP2.15□□□□□ -2.06
ECM5YMR176W FUN26P31381 517 aa2.15□□□□□ -2.06
ECM5YMR176W SUR1P33300 382 aa2.15□□□□□ -2.06
ECM5YMR176W PAD1P33751 242 aaKnown RBP RIP-Chip data2.15□□□□□ -2.06not detected
ECM5YMR176W KEG1P43614 200 aa2.15□□□□□ -2.06
ECM5YMR176W BNS1P50084 137 aa2.15□□□□□ -2.06
ECM5YMR176W STE23Q06010 1027 aa2.15□□□□□ -2.06
ECM5YMR176W MFG1Q07684 458 aa2.15□□□□□ -2.06
ECM5YMR176W LOT6Q07923 191 aa2.15□□□□□ -2.06
ECM5YMR176W YOR338WQ99326 363 aa2.15□□□□□ -2.06
ECM5YMR176W PET123P17558 318 aa2.15□□□□□ -2.06
ECM5YMR176W DAL2P25335 343 aa2.15□□□□□ -2.06
ECM5YMR176W HMX1P32339 317 aa2.15□□□□□ -2.06
ECM5YMR176W EFB1P32471 206 aaKnown RBP2.15□□□□□ -2.06
ECM5YMR176W ANR2P36090 516 aaPredicted RBP2.15□□□□□ -2.06
ECM5YMR176W SWD3P38123 315 aa2.15□□□□□ -2.06
ECM5YMR176W SPH1Q06160 661 aa2.15□□□□□ -2.06
ECM5YMR176W SMC5Q08204 1093 aa2.15□□□□□ -2.06
ECM5YMR176W SUP35P05453 685 aaKnown RBP2.15□□□□□ -2.07
ECM5YMR176W CLN3P13365 580 aa2.15□□□□□ -2.07
ECM5YMR176W MSI1P13712 422 aa2.15□□□□□ -2.07
ECM5YMR176W MRPL8P22353 238 aa2.15□□□□□ -2.07
ECM5YMR176W PCH2P38126 564 aa2.15□□□□□ -2.07
ECM5YMR176W SNL1P40548 159 aa2.15□□□□□ -2.07
ECM5YMR176W CTK3P46963 296 aaPredicted RBP2.15□□□□□ -2.07
ECM5YMR176W RIF2Q06208 395 aa2.15□□□□□ -2.07
ECM5YMR176W YDL114WQ07530 308 aa2.15□□□□□ -2.07
ECM5YMR176W RPB5P20434 215 aa2.15□□□□□ -2.07
ECM5YMR176W CKI1P20485 582 aa2.15□□□□□ -2.07
ECM5YMR176W HXT2P23585 541 aa2.15□□□□□ -2.07
ECM5YMR176W AIM24P47127 394 aa2.15□□□□□ -2.07
ECM5YMR176W MST27P53176 234 aa2.15□□□□□ -2.07
ECM5YMR176W MTQ1P53944 314 aa2.15□□□□□ -2.07
ECM5YMR176W VPS20Q04272 221 aa2.15□□□□□ -2.07
ECM5YMR176W YMR310CQ04867 317 aaPredicted RBP2.15□□□□□ -2.07
ECM5YMR176W RTN1Q04947 295 aaKnown RBP2.15□□□□□ -2.07
ECM5YMR176W PIS1P06197 220 aaKnown RBP2.14□□□□□ -2.07
ECM5YMR176W RPS0AP32905 252 aaKnown RBP2.14□□□□□ -2.07
ECM5YMR176W SEC27P41811 889 aaKnown RBP2.14□□□□□ -2.07
ECM5YMR176W EAF3Q12432 401 aa2.14□□□□□ -2.07
ECM5YMR176W DET1Q99288 334 aaKnown RBP2.14□□□□□ -2.07
ECM5YMR176W STH1P32597 1359 aa2.14□□□□□ -2.07
ECM5YMR176W RRF1P38771 230 aa2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms