RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeastyeast

Gene CMS1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMS1YLR003C YBR241CP38142 488 aa1.99□□□□□ -2.09
CMS1YLR003C RPS14BP39516 138 aaKnown RBP1.99□□□□□ -2.09
CMS1YLR003C HEM14P40012 539 aa1.99□□□□□ -2.09
CMS1YLR003C CTK3P46963 296 aaPredicted RBP1.99□□□□□ -2.09
CMS1YLR003C CUE3P53137 624 aaKnown RBP1.99□□□□□ -2.09
CMS1YLR003C AQR1P53943 586 aa1.99□□□□□ -2.09
CMS1YLR003C VHS1Q03785 461 aa1.99□□□□□ -2.09
CMS1YLR003C ARR1Q06596 294 aa1.99□□□□□ -2.09
CMS1YLR003C NOP6Q07623 225 aaKnown RBP1.99□□□□□ -2.09
CMS1YLR003C STE3P06783 470 aa1.98□□□□□ -2.09
CMS1YLR003C ASP3-2P0CX77 362 aa1.98□□□□□ -2.09
CMS1YLR003C ASP3-3P0CX78 362 aa1.98□□□□□ -2.09
CMS1YLR003C ASP3-4P0CX79 362 aa1.98□□□□□ -2.09
CMS1YLR003C ASP3-1P0CZ17 362 aa1.98□□□□□ -2.09
CMS1YLR003C GIT1P25346 518 aa1.98□□□□□ -2.09
CMS1YLR003C FAA1P30624 700 aaKnown RBP1.98□□□□□ -2.09
CMS1YLR003C DEP1P31385 405 aa1.98□□□□□ -2.09
CMS1YLR003C SMI1P32566 505 aa1.98□□□□□ -2.09
CMS1YLR003C COS9P36034 407 aa1.98□□□□□ -2.09
CMS1YLR003C YPT35P38815 214 aaKnown RBP1.98□□□□□ -2.09
CMS1YLR003C CIN2P46670 268 aa1.98□□□□□ -2.09
CMS1YLR003C RPA34P47006 233 aaPredicted RBP1.98□□□□□ -2.09
CMS1YLR003C YPS5P53057 165 aa1.98□□□□□ -2.09
CMS1YLR003C YNR068CP53754 272 aa1.98□□□□□ -2.09
CMS1YLR003C DNL4Q08387 944 aaPredicted RBP1.98□□□□□ -2.09
CMS1YLR003C DET1Q99288 334 aaKnown RBP1.98□□□□□ -2.09
CMS1YLR003C HEM4P06174 275 aa1.97□□□□□ -2.09
CMS1YLR003C STE7P06784 515 aa1.97□□□□□ -2.09
CMS1YLR003C RPL23AP0CX41 137 aaKnown RBP1.97□□□□□ -2.09
CMS1YLR003C RPL23BP0CX42 137 aaKnown RBP1.97□□□□□ -2.09
CMS1YLR003C CHA1P25379 360 aaKnown RBP1.97□□□□□ -2.09
CMS1YLR003C EFB1P32471 206 aaKnown RBP1.97□□□□□ -2.09
CMS1YLR003C LSM12P38828 187 aaKnown RBP1.97□□□□□ -2.09
CMS1YLR003C YER184CP39961 794 aa1.97□□□□□ -2.09
CMS1YLR003C BIO3P50277 480 aa1.97□□□□□ -2.09
CMS1YLR003C VEL1P53058 206 aa1.97□□□□□ -2.09
CMS1YLR003C RET3P53600 189 aa1.97□□□□□ -2.09
CMS1YLR003C PRM1P53835 661 aa1.97□□□□□ -2.09
CMS1YLR003C YNL143CP53908 130 aa1.97□□□□□ -2.09
CMS1YLR003C RNH201P53942 307 aa1.97□□□□□ -2.09
CMS1YLR003C PRP38Q00723 242 aaPredicted RBP1.97□□□□□ -2.09
CMS1YLR003C UTP6Q02354 440 aaKnown RBP1.97□□□□□ -2.09
CMS1YLR003C GAS2Q06135 555 aa1.97□□□□□ -2.09
CMS1YLR003C DBP9Q06218 594 aaKnown RBP1.97□□□□□ -2.09
CMS1YLR003C YLR177WQ06251 628 aa1.97□□□□□ -2.09
CMS1YLR003C YPR078CQ06813 372 aa1.97□□□□□ -2.09
CMS1YLR003C PML1Q07930 204 aaPredicted RBP1.97□□□□□ -2.09
CMS1YLR003C APC5Q08683 685 aa1.97□□□□□ -2.09
CMS1YLR003C YPQ1Q12010 308 aa1.97□□□□□ -2.09
CMS1YLR003C RFM1Q12192 310 aa1.97□□□□□ -2.09
CMS1YLR003C RPL21BQ12672 160 aaKnown RBP1.97□□□□□ -2.09
CMS1YLR003C YLL053CP0CD98 152 aa1.96□□□□□ -2.1
CMS1YLR003C LDS1P31379 325 aa1.96□□□□□ -2.1
CMS1YLR003C HMX1P32339 317 aa1.96□□□□□ -2.1
CMS1YLR003C ANP1P32629 500 aa1.96□□□□□ -2.1
CMS1YLR003C MRPS9P38120 278 aa1.96□□□□□ -2.1
CMS1YLR003C SEO1P39709 593 aa1.96□□□□□ -2.1
CMS1YLR003C PEX22P39718 180 aa1.96□□□□□ -2.1
CMS1YLR003C RBG1P39729 369 aa1.96□□□□□ -2.1
CMS1YLR003C YIL089WP40500 205 aa1.96□□□□□ -2.1
CMS1YLR003C YNL320WP42840 284 aa1.96□□□□□ -2.1
CMS1YLR003C CDH1P53197 566 aa1.96□□□□□ -2.1
CMS1YLR003C LST7P53237 242 aa1.96□□□□□ -2.1
CMS1YLR003C ECM11Q04110 302 aa1.96□□□□□ -2.1
CMS1YLR003C SRO7Q12038 1033 aa1.96□□□□□ -2.1
CMS1YLR003C ATP16Q12165 160 aa1.96□□□□□ -2.1
CMS1YLR003C SKS1Q12505 502 aa1.96□□□□□ -2.1
CMS1YLR003C THR4P16120 514 aaKnown RBP1.95□□□□□ -2.1
CMS1YLR003C CKI1P20485 582 aa1.95□□□□□ -2.1
CMS1YLR003C OPI1P21957 404 aa1.95□□□□□ -2.1
CMS1YLR003C HXT2P23585 541 aa1.95□□□□□ -2.1
CMS1YLR003C POT1P27796 417 aaKnown RBP RIP-Chip data1.95□□□□□ -2.1not detected
CMS1YLR003C SIF2P38262 535 aa1.95□□□□□ -2.1
CMS1YLR003C ATG7P38862 630 aa1.95□□□□□ -2.1
CMS1YLR003C STB1P42845 420 aa1.95□□□□□ -2.1
CMS1YLR003C YNL146WP53906 100 aa1.95□□□□□ -2.1
CMS1YLR003C VAC7P53950 1165 aa1.95□□□□□ -2.1
CMS1YLR003C SLT2Q00772 484 aa1.95□□□□□ -2.1
CMS1YLR003C NAT4Q04751 285 aa1.95□□□□□ -2.1
CMS1YLR003C YOR376WQ08900 122 aa1.95□□□□□ -2.1
CMS1YLR003C AIM45Q12480 344 aaKnown RBP1.95□□□□□ -2.1
CMS1YLR003C NBL1Q3E7Y6 73 aa1.95□□□□□ -2.1
CMS1YLR003C UBA3Q99344 299 aa1.95□□□□□ -2.1
CMS1YLR003C MAS2P11914 482 aa1.94□□□□□ -2.1
CMS1YLR003C MIR1P23641 311 aaKnown RBP1.94□□□□□ -2.1
CMS1YLR003C RDS1P25611 832 aa1.94□□□□□ -2.1
CMS1YLR003C TOA1P32773 286 aa1.94□□□□□ -2.1
CMS1YLR003C PDC2P32896 925 aa1.94□□□□□ -2.1
CMS1YLR003C VAM7P32912 316 aa1.94□□□□□ -2.1
CMS1YLR003C ALP1P38971 573 aa1.94□□□□□ -2.1
CMS1YLR003C KEG1P43614 200 aa1.94□□□□□ -2.1
CMS1YLR003C AIM23P47015 356 aa1.94□□□□□ -2.1
CMS1YLR003C PGU1P47180 361 aa1.94□□□□□ -2.1
CMS1YLR003C ATP22P50273 684 aaPredicted RBP1.94□□□□□ -2.1
CMS1YLR003C HST1P53685 503 aa1.94□□□□□ -2.1
CMS1YLR003C TPS1Q00764 495 aaKnown RBP1.94□□□□□ -2.1
CMS1YLR003C MRX11Q03079 207 aa1.94□□□□□ -2.1
CMS1YLR003C MCT1Q12283 360 aa1.94□□□□□ -2.1
CMS1YLR003C SFM1Q12314 213 aa1.94□□□□□ -2.1
CMS1YLR003C SFG1Q12507 346 aa1.94□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 97.6 ms