RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C BFR1P38934 470 aaKnown RBP RIP-Chip data2.23□□□□□ -2.05not detected
VPS13YLL040C ERV29P53337 310 aa2.23□□□□□ -2.05
VPS13YLL040C MSS11Q03825 758 aa2.23□□□□□ -2.05
VPS13YLL040C EAF1Q06337 982 aa2.23□□□□□ -2.05
VPS13YLL040C HUA2Q12134 243 aa2.23□□□□□ -2.05
VPS13YLL040C PCL9Q12477 304 aa2.23□□□□□ -2.05
VPS13YLL040C PNO1Q99216 274 aaKnown RBP2.23□□□□□ -2.05
VPS13YLL040C ARG3P05150 338 aa2.23□□□□□ -2.05
VPS13YLL040C SCL1P21243 252 aaKnown RBP2.23□□□□□ -2.05
VPS13YLL040C NAM9P27929 486 aa2.23□□□□□ -2.05
VPS13YLL040C YKL102CP34249 101 aa2.23□□□□□ -2.05
VPS13YLL040C ICS2P38284 255 aa2.23□□□□□ -2.05
VPS13YLL040C RRF1P38771 230 aa2.23□□□□□ -2.05
VPS13YLL040C YHR177WP38867 453 aa2.23□□□□□ -2.05
VPS13YLL040C ALK1P43633 760 aaKnown RBP2.23□□□□□ -2.05
VPS13YLL040C RRN9P53437 365 aa2.23□□□□□ -2.05
VPS13YLL040C TRM13Q12383 476 aa2.23□□□□□ -2.05
VPS13YLL040C DAL81P21657 970 aa2.23□□□□□ -2.05
VPS13YLL040C MRPL32P25348 183 aa2.23□□□□□ -2.05
VPS13YLL040C GEX1P25596 615 aa2.23□□□□□ -2.05
VPS13YLL040C RFA2P26754 273 aaKnown RBP2.23□□□□□ -2.05
VPS13YLL040C FUN19P28003 413 aaPredicted RBP2.23□□□□□ -2.05
VPS13YLL040C MRS6P32864 603 aaKnown RBP2.23□□□□□ -2.05
VPS13YLL040C LST4P34239 828 aa2.23□□□□□ -2.05
VPS13YLL040C GEX2P36173 615 aa2.23□□□□□ -2.05
VPS13YLL040C BMT5P40493 336 aa2.23□□□□□ -2.05
VPS13YLL040C GTT1P40582 234 aa2.23□□□□□ -2.05
VPS13YLL040C YJR030CP47101 745 aa2.23□□□□□ -2.05
VPS13YLL040C BOP2Q06150 570 aa2.23□□□□□ -2.05
VPS13YLL040C RSC3Q06639 885 aa2.23□□□□□ -2.05
VPS13YLL040C ATG40Q99325 256 aa2.23□□□□□ -2.05
VPS13YLL040C MAS2P11914 482 aa2.23□□□□□ -2.05
VPS13YLL040C MCK1P21965 375 aaKnown RBP2.23□□□□□ -2.05
VPS13YLL040C RPA135P22138 1203 aaKnown RBP2.23□□□□□ -2.05
VPS13YLL040C PRP28P23394 588 aa2.23□□□□□ -2.05
VPS13YLL040C PRE9P23638 258 aaKnown RBP2.23□□□□□ -2.05
VPS13YLL040C RAD27P26793 382 aa2.23□□□□□ -2.05
VPS13YLL040C PTC1P35182 281 aa2.23□□□□□ -2.05
VPS13YLL040C SHE2P36068 246 aaKnown RBP RIP-Chip data2.23□□□□□ -2.05not detected
VPS13YLL040C NIF3P53081 288 aa2.23□□□□□ -2.05
VPS13YLL040C BUD9P53226 547 aa2.23□□□□□ -2.05
VPS13YLL040C YGR127WP53275 312 aa2.23□□□□□ -2.05
VPS13YLL040C SCS7Q03529 384 aa2.23□□□□□ -2.05
VPS13YLL040C TEN1Q07921 160 aa2.23□□□□□ -2.05
VPS13YLL040C YIM1P28625 365 aa2.23□□□□□ -2.05
VPS13YLL040C FAT1P38225 669 aa2.23□□□□□ -2.05
VPS13YLL040C TRS20P38334 175 aa2.23□□□□□ -2.05
VPS13YLL040C HEM14P40012 539 aa2.23□□□□□ -2.05
VPS13YLL040C VRG4P40107 337 aa2.23□□□□□ -2.05
VPS13YLL040C POP1P41812 875 aa2.23□□□□□ -2.05
VPS13YLL040C SSN8P47821 323 aa2.23□□□□□ -2.05
VPS13YLL040C COS1P53822 381 aa2.23□□□□□ -2.05
VPS13YLL040C ASM4Q05166 528 aa2.23□□□□□ -2.05
VPS13YLL040C DDC1Q08949 612 aa2.23□□□□□ -2.05
VPS13YLL040C ITR1P30605 584 aa2.22□□□□□ -2.05
VPS13YLL040C CLB6P32943 380 aa2.22□□□□□ -2.05
VPS13YLL040C MRPL27P36526 146 aaPredicted RBP2.22□□□□□ -2.05
VPS13YLL040C APT2P36973 181 aa2.22□□□□□ -2.05
VPS13YLL040C HRB1P38922 454 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
VPS13YLL040C CDC1P40986 491 aa2.22□□□□□ -2.05
VPS13YLL040C LSM8P47093 109 aaKnown RBP2.22□□□□□ -2.05
VPS13YLL040C MRPL13Q02204 264 aa2.22□□□□□ -2.05
VPS13YLL040C LEE1Q02799 301 aaKnown RBP2.22□□□□□ -2.05
VPS13YLL040C PEX25Q02969 394 aa2.22□□□□□ -2.05
VPS13YLL040C HED1Q03937 162 aa2.22□□□□□ -2.05
VPS13YLL040C SPR28Q04921 423 aa2.22□□□□□ -2.05
VPS13YLL040C KEI1Q06346 221 aa2.22□□□□□ -2.05
VPS13YLL040C GAL1P04385 528 aa2.22□□□□□ -2.05
VPS13YLL040C GRR1P24814 1151 aa2.22□□□□□ -2.05
VPS13YLL040C SRB5P32585 307 aa2.22□□□□□ -2.05
VPS13YLL040C SFK1P35735 353 aa2.22□□□□□ -2.05
VPS13YLL040C MAL32P38158 584 aa2.22□□□□□ -2.05
VPS13YLL040C SPC25P40014 221 aa2.22□□□□□ -2.05
VPS13YLL040C MPP6P53725 186 aaPredicted RBP2.22□□□□□ -2.05
VPS13YLL040C YNR065CP53751 1116 aa2.22□□□□□ -2.05
VPS13YLL040C LAP3Q01532 483 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
VPS13YLL040C INA17Q02888 182 aa2.22□□□□□ -2.05
VPS13YLL040C PLB2Q03674 706 aa2.22□□□□□ -2.05
VPS13YLL040C SRN2Q99176 213 aa2.22□□□□□ -2.05
VPS13YLL040C ATP3P38077 311 aaKnown RBP2.22□□□□□ -2.05
VPS13YLL040C SWC4P53201 476 aa2.22□□□□□ -2.05
VPS13YLL040C ACS1Q01574 713 aa2.22□□□□□ -2.05
VPS13YLL040C MAP1Q01662 387 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
VPS13YLL040C YLR224WQ05947 369 aa2.22□□□□□ -2.05
VPS13YLL040C FMP16Q12497 93 aa2.22□□□□□ -2.05
VPS13YLL040C MTR10Q99189 972 aa2.22□□□□□ -2.05
VPS13YLL040C CKS1P20486 150 aaKnown RBP2.22□□□□□ -2.05
VPS13YLL040C BUD5P25300 642 aaPredicted RBP2.22□□□□□ -2.05
VPS13YLL040C LRE1P25579 583 aaKnown RBP2.22□□□□□ -2.05
VPS13YLL040C KAP122P32767 1081 aa2.22□□□□□ -2.05
VPS13YLL040C ECM31P38122 312 aa2.22□□□□□ -2.05
VPS13YLL040C RTC2P38279 296 aa2.22□□□□□ -2.05
VPS13YLL040C YBR238CP38330 731 aaKnown RBP2.22□□□□□ -2.05
VPS13YLL040C QDR2P40474 542 aa2.22□□□□□ -2.05
VPS13YLL040C PHB1P40961 287 aa2.22□□□□□ -2.05
VPS13YLL040C PRM10P42946 383 aa2.22□□□□□ -2.05
VPS13YLL040C PMT5P52867 743 aa2.22□□□□□ -2.05
VPS13YLL040C RSM10Q03201 203 aa2.22□□□□□ -2.05
VPS13YLL040C CWC21Q03375 135 aaKnown RBP2.22□□□□□ -2.05
VPS13YLL040C MAK32P23060 363 aa2.22□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms