RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W MTR2P34232 184 aaKnown RBP5.63□□□□□ -1.51
PRE3YJL001W RIM2P38127 377 aa5.63□□□□□ -1.51
PRE3YJL001W SPP381P38282 291 aaPredicted RBP5.63□□□□□ -1.51
PRE3YJL001W RIX1P38883 763 aaPredicted RBP5.63□□□□□ -1.51
PRE3YJL001W HRB1P38922 454 aaKnown RBP RIP-Chip data5.63□□□□□ -1.51not detected
PRE3YJL001W MNN5P46982 586 aa5.63□□□□□ -1.51
PRE3YJL001W PGU1P47180 361 aa5.63□□□□□ -1.51
PRE3YJL001W RCF2P53721 224 aa5.63□□□□□ -1.51
PRE3YJL001W SLM2P53955 656 aa5.63□□□□□ -1.51
PRE3YJL001W USA1Q03714 838 aa5.63□□□□□ -1.51
PRE3YJL001W GIS1Q03833 894 aa5.63□□□□□ -1.51
PRE3YJL001W YLR446WQ06204 433 aa5.63□□□□□ -1.51
PRE3YJL001W BLM10P43583 2143 aa5.63□□□□□ -1.51
PRE3YJL001W CBS2P14905 389 aa5.62□□□□□ -1.51
PRE3YJL001W HSC82P15108 705 aaKnown RBP5.62□□□□□ -1.51
PRE3YJL001W MCK1P21965 375 aaKnown RBP5.62□□□□□ -1.51
PRE3YJL001W MTC7P32633 139 aa5.62□□□□□ -1.51
PRE3YJL001W RSM22P36056 628 aa5.62□□□□□ -1.51
PRE3YJL001W TUL1P36096 758 aa5.62□□□□□ -1.51
PRE3YJL001W VPS51P36116 164 aa5.62□□□□□ -1.51
PRE3YJL001W TDP1P38319 544 aa5.62□□□□□ -1.51
PRE3YJL001W YMR262WP38430 313 aa5.62□□□□□ -1.51
PRE3YJL001W MET18P40469 1032 aa5.62□□□□□ -1.51
PRE3YJL001W FMP32P43557 207 aa5.62□□□□□ -1.51
PRE3YJL001W PEF1P53238 335 aa5.62□□□□□ -1.51
PRE3YJL001W MKC7P53379 596 aa5.62□□□□□ -1.51
PRE3YJL001W NCE102Q12207 173 aaRIP-Chip data5.62□□□□□ -1.51not detected
PRE3YJL001W YKL033W-AQ86ZR7 236 aa5.62□□□□□ -1.51
PRE3YJL001W ERD1P16151 362 aa5.61□□□□□ -1.51
PRE3YJL001W AAC3P18238 307 aa5.61□□□□□ -1.51
PRE3YJL001W RPB5P20434 215 aa5.61□□□□□ -1.51
PRE3YJL001W CWH43P25618 953 aa5.61□□□□□ -1.51
PRE3YJL001W BUB2P26448 306 aaPredicted RBP5.61□□□□□ -1.51
PRE3YJL001W HSP150P32478 413 aa5.61□□□□□ -1.51
PRE3YJL001W GLG1P36143 616 aa5.61□□□□□ -1.51
PRE3YJL001W SWD1P39706 426 aa5.61□□□□□ -1.51
PRE3YJL001W SOK1P40317 901 aa5.61□□□□□ -1.51
PRE3YJL001W PTR3P43606 678 aa5.61□□□□□ -1.51
PRE3YJL001W MAD3P47074 515 aa5.61□□□□□ -1.51
PRE3YJL001W HOS2P53096 452 aaPredicted RBP5.61□□□□□ -1.51
PRE3YJL001W MOT3P54785 490 aaKnown RBP5.61□□□□□ -1.51
PRE3YJL001W YDR124WQ04608 324 aa5.61□□□□□ -1.51
PRE3YJL001W RRG7Q08774 242 aaPredicted RBP5.61□□□□□ -1.51
PRE3YJL001W NTO1Q12311 748 aa5.61□□□□□ -1.51
PRE3YJL001W NKP1Q12493 238 aa5.61□□□□□ -1.51
PRE3YJL001W YPR096CO13587 100 aa5.6□□□□□ -1.51
PRE3YJL001W CBP2P03874 630 aaPredicted RBP5.6□□□□□ -1.51
PRE3YJL001W BAR1P12630 587 aa5.6□□□□□ -1.51
PRE3YJL001W RPI1P23250 407 aaKnown RBP5.6□□□□□ -1.51
PRE3YJL001W YIM1P28625 365 aa5.6□□□□□ -1.51
PRE3YJL001W LOT5P34234 306 aa5.6□□□□□ -1.51
PRE3YJL001W TPO5P36029 618 aa5.6□□□□□ -1.51
PRE3YJL001W COS111P38308 924 aa5.6□□□□□ -1.51
PRE3YJL001W YGP1P38616 354 aaKnown RBP5.6□□□□□ -1.51
PRE3YJL001W BZZ1P38822 633 aa5.6□□□□□ -1.51
PRE3YJL001W AIM2P39721 246 aa5.6□□□□□ -1.51
PRE3YJL001W PIG2P40187 538 aa5.6□□□□□ -1.51
PRE3YJL001W YIL077CP40508 320 aa5.6□□□□□ -1.51
PRE3YJL001W URB2P47108 1174 aa5.6□□□□□ -1.51
PRE3YJL001W BUL1P48524 976 aa5.6□□□□□ -1.51
PRE3YJL001W YNR071CP53757 342 aa5.6□□□□□ -1.51
PRE3YJL001W YPL071CQ02864 156 aa5.6□□□□□ -1.51
PRE3YJL001W PAL1Q05518 499 aaKnown RBP5.6□□□□□ -1.51
PRE3YJL001W GLO2Q05584 274 aa5.6□□□□□ -1.51
PRE3YJL001W DCR2Q05924 578 aa5.6□□□□□ -1.51
PRE3YJL001W VPS74Q06385 345 aa5.6□□□□□ -1.51
PRE3YJL001W DBP10Q12389 995 aaKnown RBP5.6□□□□□ -1.51
PRE3YJL001W PSF1Q12488 208 aa5.6□□□□□ -1.51
PRE3YJL001W SKS1Q12505 502 aa5.6□□□□□ -1.51
PRE3YJL001W BPH1P25356 2167 aa5.59□□□□□ -1.51
PRE3YJL001W ARF1P11076 181 aaKnown RBP5.59□□□□□ -1.51
PRE3YJL001W FEN2P25621 512 aaKnown RBP5.59□□□□□ -1.51
PRE3YJL001W SSO1P32867 290 aa5.59□□□□□ -1.51
PRE3YJL001W MAL32P38158 584 aa5.59□□□□□ -1.51
PRE3YJL001W CDS1P38221 457 aa5.59□□□□□ -1.51
PRE3YJL001W EXO84P38261 753 aa5.59□□□□□ -1.51
PRE3YJL001W AST2P39945 430 aaKnown RBP5.59□□□□□ -1.51
PRE3YJL001W ARB1P40024 610 aaKnown RBP5.59□□□□□ -1.51
PRE3YJL001W IMA5P40884 581 aa5.59□□□□□ -1.51
PRE3YJL001W NAS6P50086 228 aa5.59□□□□□ -1.51
PRE3YJL001W KEL2P50090 882 aa5.59□□□□□ -1.51
PRE3YJL001W IRC15Q02733 499 aa5.59□□□□□ -1.51
PRE3YJL001W YMR310CQ04867 317 aaPredicted RBP5.59□□□□□ -1.51
PRE3YJL001W HRI1Q05905 244 aaKnown RBP5.59□□□□□ -1.51
PRE3YJL001W RDR1Q08904 546 aa5.59□□□□□ -1.51
PRE3YJL001W FRE5Q08908 694 aa5.59□□□□□ -1.51
PRE3YJL001W FDH1Q08911 376 aa5.59□□□□□ -1.51
PRE3YJL001W TRM13Q12383 476 aa5.59□□□□□ -1.51
PRE3YJL001W MDN1Q12019 4910 aaKnown RBP5.59□□□□□ -1.51
PRE3YJL001W CDC36P06100 191 aaPredicted RBP5.58□□□□□ -1.52
PRE3YJL001W PET111P08468 800 aa5.58□□□□□ -1.52
PRE3YJL001W ERG4P25340 473 aa5.58□□□□□ -1.52
PRE3YJL001W CAT2P32796 670 aaKnown RBP5.58□□□□□ -1.52
PRE3YJL001W HIS7P33734 552 aaKnown RBP5.58□□□□□ -1.52
PRE3YJL001W HSM3P38348 480 aa5.58□□□□□ -1.52
PRE3YJL001W STP2P38704 541 aa5.58□□□□□ -1.52
PRE3YJL001W PTH1P38876 190 aaKnown RBP5.58□□□□□ -1.52
PRE3YJL001W FAR3P46671 204 aa5.58□□□□□ -1.52
PRE3YJL001W LIA1P47120 325 aaKnown RBP5.58□□□□□ -1.52
PRE3YJL001W PHO23P50947 330 aa5.58□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 23 ms