RNA–Protein interactions for RNA: YIL156W

UBP7, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeast

Gene UBP7, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP7	YIL156W	YEL020C	P39994	560 aa		4.63	□□□□□ -1.67
UBP7	YIL156W	FAU1	P40099	211 aa		4.63	□□□□□ -1.67
UBP7	YIL156W	RMR1	P53060	241 aa		4.63	□□□□□ -1.67
UBP7	YIL156W	CMC2	Q3E7A4	109 aa		4.63	□□□□□ -1.67
UBP7	YIL156W	HIS4	P00815	799 aa	Known RBP	4.63	□□□□□ -1.67
UBP7	YIL156W	RHO1	P06780	209 aa	Known RBP	4.63	□□□□□ -1.67
UBP7	YIL156W	VMA5	P31412	392 aa	Known RBP	4.63	□□□□□ -1.67
UBP7	YIL156W	DOA1	P36037	715 aa		4.63	□□□□□ -1.67
UBP7	YIL156W	IMD3	P50095	523 aa	Known RBP	4.63	□□□□□ -1.67
UBP7	YIL156W	PCP1	P53259	346 aa		4.63	□□□□□ -1.67
UBP7	YIL156W	BIO4	P53630	237 aa		4.63	□□□□□ -1.67
UBP7	YIL156W	CUS2	P53830	285 aa	Predicted RBP	4.63	□□□□□ -1.67
UBP7	YIL156W	RVB1	Q03940	463 aa	Known RBP	4.63	□□□□□ -1.67
UBP7	YIL156W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
UBP7	YIL156W	MRPS5	P33759	307 aa		4.62	□□□□□ -1.67
UBP7	YIL156W	PRS4	P38063	326 aa	Predicted RBP	4.62	□□□□□ -1.67
UBP7	YIL156W	HMS2	P47175	358 aa		4.62	□□□□□ -1.67
UBP7	YIL156W	NAS6	P50086	228 aa		4.62	□□□□□ -1.67
UBP7	YIL156W	RHO4	Q00246	291 aa		4.62	□□□□□ -1.67
UBP7	YIL156W	SDO1	Q07953	250 aa	Known RBP	4.62	□□□□□ -1.67
UBP7	YIL156W	RPS2	P25443	254 aa	Known RBP	4.62	□□□□□ -1.67
UBP7	YIL156W	HRR25	P29295	494 aa	Known RBP	4.62	□□□□□ -1.67
UBP7	YIL156W	PHB2	P50085	310 aa		4.62	□□□□□ -1.67
UBP7	YIL156W	REX4	Q08237	289 aa		4.62	□□□□□ -1.67
UBP7	YIL156W	SAM4	Q08985	325 aa	Known RBP	4.62	□□□□□ -1.67
UBP7	YIL156W	UTR1	P21373	530 aa		4.61	□□□□□ -1.67
UBP7	YIL156W	UTR4	P32626	227 aa		4.61	□□□□□ -1.67
UBP7	YIL156W	PFS1	P38872	237 aa		4.61	□□□□□ -1.67
UBP7	YIL156W	SOL4	P53315	255 aa		4.61	□□□□□ -1.67
UBP7	YIL156W	MRPL50	P53724	139 aa		4.61	□□□□□ -1.67
UBP7	YIL156W	LAG2	Q92325	660 aa		4.61	□□□□□ -1.67
UBP7	YIL156W	YOR338W	Q99326	363 aa		4.61	□□□□□ -1.67
UBP7	YIL156W	GEA1	P47102	1408 aa	Predicted RBP	4.61	□□□□□ -1.67
UBP7	YIL156W	TMT1	P32643	299 aa		4.61	□□□□□ -1.67
UBP7	YIL156W	RFC4	P40339	323 aa	Known RBP	4.61	□□□□□ -1.67
UBP7	YIL156W	COX16	P47081	118 aa		4.61	□□□□□ -1.67
UBP7	YIL156W	SSN8	P47821	323 aa		4.61	□□□□□ -1.67
UBP7	YIL156W	ORC5	P50874	479 aa		4.61	□□□□□ -1.67
UBP7	YIL156W	AIM39	Q08223	395 aa		4.61	□□□□□ -1.67
UBP7	YIL156W	GAL4	P04386	881 aa		4.61	□□□□□ -1.67
UBP7	YIL156W	PUT3	P25502	979 aa	Predicted RBP	4.61	□□□□□ -1.67
UBP7	YIL156W	VAM7	P32912	316 aa		4.61	□□□□□ -1.67
UBP7	YIL156W	SHO1	P40073	367 aa		4.61	□□□□□ -1.67
UBP7	YIL156W	KIN3	P22209	435 aa		4.6	□□□□□ -1.67
UBP7	YIL156W	RPL24B	P24000	155 aa	Known RBP	4.6	□□□□□ -1.67
UBP7	YIL156W	TOA2	P32774	122 aa		4.6	□□□□□ -1.67
UBP7	YIL156W	MRPL10	P36520	322 aa		4.6	□□□□□ -1.67
UBP7	YIL156W	ISC1	P40015	477 aa	Known RBP	4.6	□□□□□ -1.67
UBP7	YIL156W	PHO23	P50947	330 aa		4.6	□□□□□ -1.67
UBP7	YIL156W	GPI1	P53306	609 aa		4.6	□□□□□ -1.67
UBP7	YIL156W	YMR034C	Q05131	434 aa	Predicted RBP	4.6	□□□□□ -1.67
UBP7	YIL156W	FUS2	Q05670	677 aa		4.6	□□□□□ -1.67
UBP7	YIL156W	YDL218W	Q07629	317 aa		4.6	□□□□□ -1.67
UBP7	YIL156W	MSH5	Q12175	901 aa		4.6	□□□□□ -1.67
UBP7	YIL156W	RAD9	P14737	1309 aa		4.6	□□□□□ -1.67
UBP7	YIL156W	HEM2	P05373	342 aa		4.6	□□□□□ -1.67
UBP7	YIL156W	CDC33	P07260	213 aa	Known RBP	4.6	□□□□□ -1.67
UBP7	YIL156W	DAL82	P21705	255 aa		4.6	□□□□□ -1.67
UBP7	YIL156W	BUB3	P26449	341 aa		4.6	□□□□□ -1.67
UBP7	YIL156W	POP5	P28005	173 aa		4.6	□□□□□ -1.67
UBP7	YIL156W	PTR2	P32901	601 aa		4.6	□□□□□ -1.67
UBP7	YIL156W	TOD6	P34219	525 aa		4.6	□□□□□ -1.67
UBP7	YIL156W	TSA1	P34760	196 aa	Known RBP	4.6	□□□□□ -1.67
UBP7	YIL156W	COA1	P40452	197 aa		4.6	□□□□□ -1.67
UBP7	YIL156W	AIM24	P47127	394 aa		4.6	□□□□□ -1.67
UBP7	YIL156W	YNL247W	P53852	767 aa	Known RBP	4.6	□□□□□ -1.67
UBP7	YIL156W	ADH6	Q04894	360 aa	Known RBP	4.6	□□□□□ -1.67
UBP7	YIL156W	TPK3	P05986	398 aa		4.59	□□□□□ -1.67
UBP7	YIL156W	RAD1	P06777	1100 aa		4.59	□□□□□ -1.67
UBP7	YIL156W	RPB8	P20436	146 aa		4.59	□□□□□ -1.67
UBP7	YIL156W	VPS1	P21576	704 aa	Known RBP	4.59	□□□□□ -1.67
UBP7	YIL156W	MNS1	P32906	549 aa		4.59	□□□□□ -1.67
UBP7	YIL156W	FLO10	P36170	1169 aa		4.59	□□□□□ -1.67
UBP7	YIL156W	PHO90	P39535	881 aa		4.59	□□□□□ -1.67
UBP7	YIL156W	SLM1	P40485	686 aa		4.59	□□□□□ -1.67
UBP7	YIL156W	TAF6	P53040	516 aa		4.59	□□□□□ -1.67
UBP7	YIL156W	GIM5	Q04493	163 aa		4.59	□□□□□ -1.67
UBP7	YIL156W	BER1	Q06688	274 aa	Known RBP	4.59	□□□□□ -1.67
UBP7	YIL156W	SSK1	Q07084	712 aa		4.59	□□□□□ -1.67
UBP7	YIL156W	ORT1	Q12375	292 aa		4.59	□□□□□ -1.67
UBP7	YIL156W	RRI1	Q12468	440 aa		4.59	□□□□□ -1.67
UBP7	YIL156W	BI2	P03873	423 aa		4.59	□□□□□ -1.67
UBP7	YIL156W	ATP1	P07251	545 aa	Known RBP	4.59	□□□□□ -1.67
UBP7	YIL156W	SNC1	P31109	117 aa		4.59	□□□□□ -1.67
UBP7	YIL156W	COX13	P32799	129 aa		4.59	□□□□□ -1.67
UBP7	YIL156W	AGP3	P43548	558 aa		4.59	□□□□□ -1.67
UBP7	YIL156W	GLG2	P47011	380 aa		4.59	□□□□□ -1.67
UBP7	YIL156W	STB4	P50104	949 aa		4.59	□□□□□ -1.67
UBP7	YIL156W	SEH1	P53011	349 aa	Known RBP	4.59	□□□□□ -1.67
UBP7	YIL156W	TRM112	P53738	135 aa	Predicted RBP	4.59	□□□□□ -1.67
UBP7	YIL156W	EAF7	P53911	425 aa	Known RBP	4.59	□□□□□ -1.67
UBP7	YIL156W	IVY1	Q04934	453 aa		4.59	□□□□□ -1.67
UBP7	YIL156W	YPQ1	Q12010	308 aa		4.59	□□□□□ -1.67
UBP7	YIL156W	YBL111C	Q3E7Y5	667 aa		4.59	□□□□□ -1.67
UBP7	YIL156W	RIB1	P38066	345 aa		4.59	□□□□□ -1.68
UBP7	YIL156W	YBR056W	P38081	501 aa		4.59	□□□□□ -1.68
UBP7	YIL156W	ATG7	P38862	630 aa		4.59	□□□□□ -1.68
UBP7	YIL156W	YGR210C	P42942	411 aa		4.59	□□□□□ -1.68
UBP7	YIL156W	LIF1	P53150	421 aa		4.59	□□□□□ -1.68
UBP7	YIL156W	CDA2	Q06703	312 aa		4.59	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 15 ms