RNA–Protein interactions for RNA: YGR135W

PRE9, Transcript of Alpha 3 subunit of the 20S proteasome, yeast

Gene PRE9, Length 777 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRE9	YGR135W	DBF2	P22204	572 aa		4.07	□□□□□ -1.76
PRE9	YGR135W	GIT1	P25346	518 aa		4.07	□□□□□ -1.76
PRE9	YGR135W	PUP3	P25451	205 aa	Known RBP	4.07	□□□□□ -1.76
PRE9	YGR135W	PPZ1	P26570	692 aa		4.07	□□□□□ -1.76
PRE9	YGR135W	PRR1	P28708	518 aa		4.07	□□□□□ -1.76
PRE9	YGR135W	MRPL9	P31334	269 aa		4.07	□□□□□ -1.76
PRE9	YGR135W	SPT14	P32363	452 aa		4.07	□□□□□ -1.76
PRE9	YGR135W	MEI5	P32489	222 aa		4.07	□□□□□ -1.76
PRE9	YGR135W	FRE2	P36033	711 aa		4.07	□□□□□ -1.76
PRE9	YGR135W	GPX2	P38143	162 aa		4.07	□□□□□ -1.76
PRE9	YGR135W	VBA2	P38358	474 aa	Known RBP	4.07	□□□□□ -1.76
PRE9	YGR135W	YHK8	P38776	514 aa		4.07	□□□□□ -1.76
PRE9	YGR135W	VMA7	P39111	118 aa		4.07	□□□□□ -1.76
PRE9	YGR135W	NAS2	P40555	220 aa		4.07	□□□□□ -1.76
PRE9	YGR135W	YFR020W	P43600	232 aa		4.07	□□□□□ -1.76
PRE9	YGR135W	ALB1	P47019	175 aa	Predicted RBP	4.07	□□□□□ -1.76
PRE9	YGR135W	ALT2	P52892	507 aa		4.07	□□□□□ -1.76
PRE9	YGR135W	VPS73	P53142	486 aa	Known RBP	4.07	□□□□□ -1.76
PRE9	YGR135W	CWC25	P53854	179 aa	Known RBP	4.07	□□□□□ -1.76
PRE9	YGR135W	ATG4	P53867	494 aa		4.07	□□□□□ -1.76
PRE9	YGR135W	TOF2	Q02208	771 aa		4.07	□□□□□ -1.76
PRE9	YGR135W	GAS3	Q03655	524 aa		4.07	□□□□□ -1.76
PRE9	YGR135W	PEX12	Q04370	399 aa		4.07	□□□□□ -1.76
PRE9	YGR135W	PLM2	Q04383	521 aa		4.07	□□□□□ -1.76
PRE9	YGR135W	ECM7	Q06200	448 aa		4.07	□□□□□ -1.76
PRE9	YGR135W	GPI11	Q06636	219 aa		4.07	□□□□□ -1.76
PRE9	YGR135W	DIS3	Q08162	1001 aa	Known RBP	4.07	□□□□□ -1.76
PRE9	YGR135W	UAF30	Q08747	228 aa		4.07	□□□□□ -1.76
PRE9	YGR135W	GTT2	Q12390	233 aa		4.07	□□□□□ -1.76
PRE9	YGR135W	PFK27	Q12471	397 aa	Predicted RBP	4.07	□□□□□ -1.76
PRE9	YGR135W	FMP16	Q12497	93 aa		4.07	□□□□□ -1.76
PRE9	YGR135W	YDL007C-A	Q2V2Q0	85 aa		4.07	□□□□□ -1.76
PRE9	YGR135W	SAS5	Q99314	248 aa		4.07	□□□□□ -1.76
PRE9	YGR135W	GPH1	P06738	902 aa	Known RBP	4.06	□□□□□ -1.76
PRE9	YGR135W	ADE5,7	P07244	802 aa	Known RBP	4.06	□□□□□ -1.76
PRE9	YGR135W	ALG7	P07286	448 aa		4.06	□□□□□ -1.76
PRE9	YGR135W	GRX2	P17695	143 aa	Known RBP	4.06	□□□□□ -1.76
PRE9	YGR135W	DAP2	P18962	818 aa		4.06	□□□□□ -1.76
PRE9	YGR135W	SAT4	P25333	603 aa	Known RBP	4.06	□□□□□ -1.76
PRE9	YGR135W	BOS1	P25385	244 aa		4.06	□□□□□ -1.76
PRE9	YGR135W	YCR090C	P25654	182 aa	Known RBP	4.06	□□□□□ -1.76
PRE9	YGR135W	IDH2	P28241	369 aa	Known RBP	4.06	□□□□□ -1.76
PRE9	YGR135W	NDI1	P32340	513 aa		4.06	□□□□□ -1.76
PRE9	YGR135W	MRPL6	P32904	214 aa		4.06	□□□□□ -1.76
PRE9	YGR135W	YKL063C	P35725	167 aa		4.06	□□□□□ -1.76
PRE9	YGR135W	ARN2	P38724	620 aa		4.06	□□□□□ -1.76
PRE9	YGR135W	ELO1	P39540	310 aa		4.06	□□□□□ -1.76
PRE9	YGR135W	COA1	P40452	197 aa		4.06	□□□□□ -1.76
PRE9	YGR135W	GUF1	P46943	645 aa		4.06	□□□□□ -1.76
PRE9	YGR135W	AIM23	P47015	356 aa		4.06	□□□□□ -1.76
PRE9	YGR135W	NET1	P47035	1189 aa		4.06	□□□□□ -1.76
PRE9	YGR135W	SNX4	P47057	423 aa		4.06	□□□□□ -1.76
PRE9	YGR135W	YJR154W	P47181	346 aa		4.06	□□□□□ -1.76
PRE9	YGR135W	BPL1	P48445	690 aa	Predicted RBP	4.06	□□□□□ -1.76
PRE9	YGR135W	STB4	P50104	949 aa		4.06	□□□□□ -1.76
PRE9	YGR135W	MRPL50	P53724	139 aa		4.06	□□□□□ -1.76
PRE9	YGR135W	CPR8	P53728	308 aa		4.06	□□□□□ -1.76
PRE9	YGR135W	IMP4	P53941	290 aa	Known RBP	4.06	□□□□□ -1.76
PRE9	YGR135W	PRP38	Q00723	242 aa	Predicted RBP	4.06	□□□□□ -1.76
PRE9	YGR135W	TIM44	Q01852	431 aa		4.06	□□□□□ -1.76
PRE9	YGR135W	SKO1	Q02100	647 aa		4.06	□□□□□ -1.76
PRE9	YGR135W	HPT1	Q04178	221 aa	Known RBP	4.06	□□□□□ -1.76
PRE9	YGR135W	RAD33	Q04231	177 aa		4.06	□□□□□ -1.76
PRE9	YGR135W	SHS1	Q07657	551 aa		4.06	□□□□□ -1.76
PRE9	YGR135W	AEP3	Q12089	606 aa		4.06	□□□□□ -1.76
PRE9	YGR135W	RTC5	Q12108	567 aa	Known RBP	4.06	□□□□□ -1.76
PRE9	YGR135W	YGK3	Q12222	375 aa	Predicted RBP	4.06	□□□□□ -1.76
PRE9	YGR135W	RTR2	Q12378	196 aa		4.06	□□□□□ -1.76
PRE9	YGR135W	YPR1	Q12458	312 aa		4.06	□□□□□ -1.76
PRE9	YGR135W	YPL247C	Q12523	523 aa		4.06	□□□□□ -1.76
PRE9	YGR135W	YKL018C-A	Q3E7A7	99 aa		4.06	□□□□□ -1.76
PRE9	YGR135W	FKS1	P38631	1876 aa	Known RBP	4.06	□□□□□ -1.76
PRE9	YGR135W	THP2	O13539	261 aa	Known RBP	4.05	□□□□□ -1.76
PRE9	YGR135W	RPL4A	P10664	362 aa	Known RBP	4.05	□□□□□ -1.76
PRE9	YGR135W	RPL24B	P24000	155 aa	Known RBP	4.05	□□□□□ -1.76
PRE9	YGR135W	BUB2	P26448	306 aa	Predicted RBP	4.05	□□□□□ -1.76
PRE9	YGR135W	NTG1	P31378	399 aa		4.05	□□□□□ -1.76
PRE9	YGR135W	ASF2	P32448	525 aa	Predicted RBP	4.05	□□□□□ -1.76
PRE9	YGR135W	SUR1	P33300	382 aa		4.05	□□□□□ -1.76
PRE9	YGR135W	SHP1	P34223	423 aa		4.05	□□□□□ -1.76
PRE9	YGR135W	YPT53	P36019	220 aa		4.05	□□□□□ -1.76
PRE9	YGR135W	SNU114	P36048	1008 aa	Known RBP	4.05	□□□□□ -1.76
PRE9	YGR135W	MCR1	P36060	302 aa	Known RBP	4.05	□□□□□ -1.76
PRE9	YGR135W	GLG1	P36143	616 aa		4.05	□□□□□ -1.76
PRE9	YGR135W	FMP23	P38231	175 aa		4.05	□□□□□ -1.76
PRE9	YGR135W	MMS4	P38257	691 aa		4.05	□□□□□ -1.76
PRE9	YGR135W	IPI1	P38803	334 aa	Predicted RBP	4.05	□□□□□ -1.76
PRE9	YGR135W	YHR131C	P38835	850 aa		4.05	□□□□□ -1.76
PRE9	YGR135W	ATG7	P38862	630 aa		4.05	□□□□□ -1.76
PRE9	YGR135W	YER137C	P40083	148 aa	Known RBP	4.05	□□□□□ -1.76
PRE9	YGR135W	UTP18	P40362	594 aa	Predicted RBP	4.05	□□□□□ -1.76
PRE9	YGR135W	GCD10	P41814	478 aa		4.05	□□□□□ -1.76
PRE9	YGR135W	COS4	P43542	379 aa		4.05	□□□□□ -1.76
PRE9	YGR135W	RPL4B	P49626	362 aa	Known RBP	4.05	□□□□□ -1.76
PRE9	YGR135W	KEL2	P50090	882 aa		4.05	□□□□□ -1.76
PRE9	YGR135W	BIO3	P50277	480 aa		4.05	□□□□□ -1.76
PRE9	YGR135W	PDR16	P53860	351 aa	Known RBP	4.05	□□□□□ -1.76
PRE9	YGR135W	AQR1	P53943	586 aa		4.05	□□□□□ -1.76
PRE9	YGR135W	RMI1	Q02685	241 aa		4.05	□□□□□ -1.76
PRE9	YGR135W	GRX5	Q02784	150 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 36.6 ms