RNA–Protein interactions for RNA: YGR003W

CUL3, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene CUL3, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUL3YGR003W RPL23AP0CX41 137 aaKnown RBP1.03□□□□□ -2.24
CUL3YGR003W RPL23BP0CX42 137 aaKnown RBP1.03□□□□□ -2.24
CUL3YGR003W SCH9P11792 824 aaKnown RBP1.03□□□□□ -2.24
CUL3YGR003W UNG1P12887 359 aa1.03□□□□□ -2.24
CUL3YGR003W PSO2P30620 661 aa1.03□□□□□ -2.24
CUL3YGR003W PTK1P36002 662 aaPredicted RBP1.03□□□□□ -2.24
CUL3YGR003W SOL2P37262 315 aa1.03□□□□□ -2.24
CUL3YGR003W SHE1P38200 338 aa1.03□□□□□ -2.24
CUL3YGR003W YSW1P38280 609 aa1.03□□□□□ -2.24
CUL3YGR003W ATG7P38862 630 aa1.03□□□□□ -2.24
CUL3YGR003W YGR015CP53208 328 aa1.03□□□□□ -2.24
CUL3YGR003W ERO1Q03103 563 aa1.03□□□□□ -2.24
CUL3YGR003W AIM33Q04516 312 aa1.03□□□□□ -2.24
CUL3YGR003W SLF1Q12034 447 aaKnown RBP1.03□□□□□ -2.24
CUL3YGR003W HEM4P06174 275 aa1.03□□□□□ -2.25
CUL3YGR003W CYM1P32898 989 aa1.03□□□□□ -2.25
CUL3YGR003W ADH5P38113 351 aaKnown RBP1.03□□□□□ -2.25
CUL3YGR003W YBR241CP38142 488 aa1.03□□□□□ -2.25
CUL3YGR003W LSM12P38828 187 aaKnown RBP1.03□□□□□ -2.25
CUL3YGR003W RRT13P40042 185 aa1.03□□□□□ -2.25
CUL3YGR003W YGR067CP53243 804 aa1.03□□□□□ -2.25
CUL3YGR003W SUR7P54003 302 aa1.03□□□□□ -2.25
CUL3YGR003W KTR6P54070 446 aa1.03□□□□□ -2.25
CUL3YGR003W MRX11Q03079 207 aa1.03□□□□□ -2.25
CUL3YGR003W AAD15Q08361 143 aa1.03□□□□□ -2.25
CUL3YGR003W SRO7Q12038 1033 aa1.03□□□□□ -2.25
CUL3YGR003W YDL109CQ12103 647 aa1.03□□□□□ -2.25
CUL3YGR003W FRE8Q12209 686 aa1.03□□□□□ -2.25
CUL3YGR003W HTZ1Q12692 134 aaKnown RBP1.03□□□□□ -2.25
CUL3YGR003W YAL067W-AQ8TGK6 75 aa1.03□□□□□ -2.25
CUL3YGR003W MEX67Q99257 599 aaKnown RBP1.03□□□□□ -2.25
CUL3YGR003W BI3Q9ZZW7 517 aa1.03□□□□□ -2.25
CUL3YGR003W FLO11P08640 1367 aa1.02□□□□□ -2.25
CUL3YGR003W SAL1D6W196 494 aa1.02□□□□□ -2.25
CUL3YGR003W MIR1P23641 311 aaKnown RBP1.02□□□□□ -2.25
CUL3YGR003W KAP104P38217 918 aaKnown RBP1.02□□□□□ -2.25
CUL3YGR003W RCK2P38623 610 aa1.02□□□□□ -2.25
CUL3YGR003W SEC9P40357 651 aa1.02□□□□□ -2.25
CUL3YGR003W YFL012WP43580 148 aa1.02□□□□□ -2.25
CUL3YGR003W YJL055WP47044 245 aa1.02□□□□□ -2.25
CUL3YGR003W VEL1P53058 206 aa1.02□□□□□ -2.25
CUL3YGR003W FSH2Q05015 223 aa1.02□□□□□ -2.25
CUL3YGR003W YPS3Q12303 508 aa1.02□□□□□ -2.25
CUL3YGR003W ERP4Q12450 207 aa1.02□□□□□ -2.25
CUL3YGR003W STE7P06784 515 aa1.01□□□□□ -2.25
CUL3YGR003W RPL16AP26784 199 aaKnown RBP1.01□□□□□ -2.25
CUL3YGR003W TPS2P31688 896 aaKnown RBP1.01□□□□□ -2.25
CUL3YGR003W VAM7P32912 316 aa1.01□□□□□ -2.25
CUL3YGR003W YCH1P42937 148 aa1.01□□□□□ -2.25
CUL3YGR003W MLC1P53141 149 aa1.01□□□□□ -2.25
CUL3YGR003W RET3P53600 189 aa1.01□□□□□ -2.25
CUL3YGR003W UTP6Q02354 440 aaKnown RBP1.01□□□□□ -2.25
CUL3YGR003W MCH1Q07376 486 aa1.01□□□□□ -2.25
CUL3YGR003W LCP5P40079 357 aaPredicted RBP1.01□□□□□ -2.25
CUL3YGR003W STB1P42845 420 aa1.01□□□□□ -2.25
CUL3YGR003W AIM23P47015 356 aa1.01□□□□□ -2.25
CUL3YGR003W EFM3P47163 339 aa1.01□□□□□ -2.25
CUL3YGR003W ALF1P53904 254 aa1.01□□□□□ -2.25
CUL3YGR003W TRM82Q03774 444 aa1.01□□□□□ -2.25
CUL3YGR003W SHS1Q07657 551 aa1.01□□□□□ -2.25
CUL3YGR003W HIF1Q12373 385 aa1.01□□□□□ -2.25
CUL3YGR003W COX10P21592 462 aa1□□□□□ -2.25
CUL3YGR003W SSE1P32589 693 aaKnown RBP1□□□□□ -2.25
CUL3YGR003W FMT1P32785 401 aa1□□□□□ -2.25
CUL3YGR003W FRM2P37261 193 aa1□□□□□ -2.25
CUL3YGR003W PEX22P39718 180 aa1□□□□□ -2.25
CUL3YGR003W LYS12P40495 371 aaKnown RBP1□□□□□ -2.25
CUL3YGR003W AIP1P46680 615 aaKnown RBP1□□□□□ -2.25
CUL3YGR003W CPR7P47103 393 aa1□□□□□ -2.25
CUL3YGR003W HST4P53688 370 aa1□□□□□ -2.25
CUL3YGR003W YPR195CQ06594 109 aa1□□□□□ -2.25
CUL3YGR003W YOL029CQ08187 201 aa1□□□□□ -2.25
CUL3YGR003W RPS19AP07280 144 aaKnown RBP1□□□□□ -2.25
CUL3YGR003W RPS19BP07281 144 aaPredicted RBP1□□□□□ -2.25
CUL3YGR003W UTR1P21373 530 aa1□□□□□ -2.25
CUL3YGR003W GRR1P24814 1151 aa1□□□□□ -2.25
CUL3YGR003W MSK1P32048 576 aa1□□□□□ -2.25
CUL3YGR003W CBF5P33322 483 aaKnown RBP RIP-Chip data1□□□□□ -2.25not detected
CUL3YGR003W SEC28P40509 296 aaKnown RBP1□□□□□ -2.25
CUL3YGR003W YJR030CP47101 745 aa1□□□□□ -2.25
CUL3YGR003W LST7P53237 242 aa1□□□□□ -2.25
CUL3YGR003W RNH201P53942 307 aa1□□□□□ -2.25
CUL3YGR003W SLT2Q00772 484 aa1□□□□□ -2.25
CUL3YGR003W SMP3Q04174 516 aa1□□□□□ -2.25
CUL3YGR003W API2Q04413 109 aa1□□□□□ -2.25
CUL3YGR003W YOL075CQ08234 1294 aa1□□□□□ -2.25
CUL3YGR003W YDR018CQ12185 396 aa1□□□□□ -2.25
CUL3YGR003W RPN6Q12377 434 aa1□□□□□ -2.25
CUL3YGR003W AUS1Q08409 1394 aa0.99□□□□□ -2.25
CUL3YGR003W CKI1P20485 582 aa0.99□□□□□ -2.25
CUL3YGR003W FAA1P30624 700 aaKnown RBP0.99□□□□□ -2.25
CUL3YGR003W YPT35P38815 214 aaKnown RBP0.99□□□□□ -2.25
CUL3YGR003W GDI1P39958 451 aaKnown RBP0.99□□□□□ -2.25
CUL3YGR003W EPL1P43572 832 aa0.99□□□□□ -2.25
CUL3YGR003W COQ5P49017 307 aa0.99□□□□□ -2.25
CUL3YGR003W YPL107WQ02873 248 aa0.99□□□□□ -2.25
CUL3YGR003W YMR244WQ04018 355 aa0.99□□□□□ -2.25
CUL3YGR003W CSM3Q04659 317 aa0.99□□□□□ -2.25
CUL3YGR003W TAF10Q12030 206 aa0.99□□□□□ -2.25
CUL3YGR003W SRN2Q99176 213 aa0.99□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms