RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W UBC8P28263 218 aa6.22□□□□□ -1.41
NUP49YGL172W MDJ1P35191 511 aa6.22□□□□□ -1.41
NUP49YGL172W ECM1P39715 212 aa6.22□□□□□ -1.41
NUP49YGL172W LEM3P42838 414 aa6.22□□□□□ -1.41
NUP49YGL172W CAK1P43568 368 aaPredicted RBP6.22□□□□□ -1.41
NUP49YGL172W GPI8P49018 411 aa6.22□□□□□ -1.41
NUP49YGL172W TOS2P50078 622 aa6.22□□□□□ -1.41
NUP49YGL172W SEH1P53011 349 aaKnown RBP6.22□□□□□ -1.41
NUP49YGL172W DBP6P53734 629 aaKnown RBP6.22□□□□□ -1.41
NUP49YGL172W YLR460CP54007 376 aa6.22□□□□□ -1.41
NUP49YGL172W REH1Q06709 432 aa6.22□□□□□ -1.41
NUP49YGL172W YOR376WQ08900 122 aa6.22□□□□□ -1.41
NUP49YGL172W MRX4Q12467 430 aa6.22□□□□□ -1.41
NUP49YGL172W FBA1P14540 359 aaKnown RBP6.21□□□□□ -1.42
NUP49YGL172W KGD1P20967 1014 aaKnown RBP6.21□□□□□ -1.42
NUP49YGL172W SAC1P32368 623 aaKnown RBP6.21□□□□□ -1.42
NUP49YGL172W EMP70P32802 667 aa6.21□□□□□ -1.42
NUP49YGL172W GID8P40208 455 aa6.21□□□□□ -1.42
NUP49YGL172W SNL1P40548 159 aa6.21□□□□□ -1.42
NUP49YGL172W SNM1P40993 198 aa6.21□□□□□ -1.42
NUP49YGL172W SMK1P41808 388 aa6.21□□□□□ -1.42
NUP49YGL172W SHR5P41912 237 aa6.21□□□□□ -1.42
NUP49YGL172W IRC6P43615 237 aa6.21□□□□□ -1.42
NUP49YGL172W YPL068CQ02749 293 aa6.21□□□□□ -1.42
NUP49YGL172W YDR541CQ03049 344 aa6.21□□□□□ -1.42
NUP49YGL172W HOT1Q03213 719 aa6.21□□□□□ -1.42
NUP49YGL172W YDR239CQ03780 787 aa6.21□□□□□ -1.42
NUP49YGL172W ENT2Q05785 613 aa6.21□□□□□ -1.42
NUP49YGL172W ARV1Q06541 321 aa6.21□□□□□ -1.42
NUP49YGL172W VPS36Q06696 566 aa6.21□□□□□ -1.42
NUP49YGL172W CYK3Q07533 885 aa6.21□□□□□ -1.42
NUP49YGL172W RAX1Q08760 435 aa6.21□□□□□ -1.42
NUP49YGL172W VIK1Q12045 647 aa6.21□□□□□ -1.42
NUP49YGL172W PAR32Q12515 295 aaKnown RBP6.21□□□□□ -1.42
NUP49YGL172W AI1P03875 834 aa6.2□□□□□ -1.42
NUP49YGL172W RPA135P22138 1203 aaKnown RBP6.2□□□□□ -1.42
NUP49YGL172W IDH1P28834 360 aaKnown RBP RIP-Chip data6.2□□□□□ -1.42not detected
NUP49YGL172W APE2P32454 952 aaKnown RBP6.2□□□□□ -1.42
NUP49YGL172W SEF1P34228 1148 aa6.2□□□□□ -1.42
NUP49YGL172W HCS1P34243 683 aa6.2□□□□□ -1.42
NUP49YGL172W ALG3P38179 458 aa6.2□□□□□ -1.42
NUP49YGL172W THO1P40040 218 aaKnown RBP6.2□□□□□ -1.42
NUP49YGL172W NUP57P48837 541 aa6.2□□□□□ -1.42
NUP49YGL172W SKP1P52286 194 aa6.2□□□□□ -1.42
NUP49YGL172W NCE101Q02820 53 aa6.2□□□□□ -1.42
NUP49YGL172W YPL107WQ02873 248 aa6.2□□□□□ -1.42
NUP49YGL172W RNH202Q05635 350 aa6.2□□□□□ -1.42
NUP49YGL172W LOT6Q07923 191 aa6.2□□□□□ -1.42
NUP49YGL172W MEU1Q07938 337 aaKnown RBP RIP-Chip data6.2□□□□□ -1.42not detected
NUP49YGL172W RSA1Q08932 381 aa6.2□□□□□ -1.42
NUP49YGL172W YOR214CQ12282 236 aa6.2□□□□□ -1.42
NUP49YGL172W TAF3Q12297 353 aa6.2□□□□□ -1.42
NUP49YGL172W ARF1P11076 181 aaKnown RBP6.19□□□□□ -1.42
NUP49YGL172W KSS1P14681 368 aa6.19□□□□□ -1.42
NUP49YGL172W NCP1P16603 691 aaKnown RBP6.19□□□□□ -1.42
NUP49YGL172W PBN1P25580 416 aa6.19□□□□□ -1.42
NUP49YGL172W POL4P25615 582 aa6.19□□□□□ -1.42
NUP49YGL172W AHP1P38013 176 aaKnown RBP6.19□□□□□ -1.42
NUP49YGL172W OM14P38325 134 aa6.19□□□□□ -1.42
NUP49YGL172W RCY1P39531 840 aa6.19□□□□□ -1.42
NUP49YGL172W YAR028WP39548 234 aa6.19□□□□□ -1.42
NUP49YGL172W AST2P39945 430 aaKnown RBP6.19□□□□□ -1.42
NUP49YGL172W FAR7P43592 221 aa6.19□□□□□ -1.42
NUP49YGL172W GPG1P53130 126 aa6.19□□□□□ -1.42
NUP49YGL172W MPC1P53157 130 aaKnown RBP6.19□□□□□ -1.42
NUP49YGL172W MEP3P53390 489 aa6.19□□□□□ -1.42
NUP49YGL172W YMR226CQ05016 267 aaKnown RBP6.19□□□□□ -1.42
NUP49YGL172W SEI1Q06058 285 aa6.19□□□□□ -1.42
NUP49YGL172W YDL211CQ12121 372 aa6.19□□□□□ -1.42
NUP49YGL172W MSL5Q12186 476 aaKnown RBP RIP-Chip data6.19□□□□□ -1.42not detected
NUP49YGL172W YLR126CQ12288 251 aa6.19□□□□□ -1.42
NUP49YGL172W NPC2Q12408 173 aa6.19□□□□□ -1.42
NUP49YGL172W HBN1Q96VH4 193 aa6.19□□□□□ -1.42
NUP49YGL172W SIR3P06701 978 aa6.18□□□□□ -1.42
NUP49YGL172W ATR1P13090 542 aa6.18□□□□□ -1.42
NUP49YGL172W SEC62P21825 274 aa6.18□□□□□ -1.42
NUP49YGL172W YCR102CP25608 368 aa6.18□□□□□ -1.42
NUP49YGL172W HSP150P32478 413 aa6.18□□□□□ -1.42
NUP49YGL172W HBS1P32769 611 aaKnown RBP6.18□□□□□ -1.42
NUP49YGL172W SNU114P36048 1008 aaKnown RBP6.18□□□□□ -1.42
NUP49YGL172W MED8P38304 223 aa6.18□□□□□ -1.42
NUP49YGL172W YHR097CP38809 366 aaKnown RBP6.18□□□□□ -1.42
NUP49YGL172W SER3P40054 469 aa6.18□□□□□ -1.42
NUP49YGL172W YNL195CP40168 261 aa6.18□□□□□ -1.42
NUP49YGL172W PRM8P53174 237 aa6.18□□□□□ -1.42
NUP49YGL172W ATG21Q02887 496 aa6.18□□□□□ -1.42
NUP49YGL172W RSN1Q03516 953 aa6.18□□□□□ -1.42
NUP49YGL172W URC2Q04411 772 aa6.18□□□□□ -1.42
NUP49YGL172W PAL1Q05518 499 aaKnown RBP6.18□□□□□ -1.42
NUP49YGL172W YOL024WQ08172 172 aa6.18□□□□□ -1.42
NUP49YGL172W YOS9Q99220 542 aa6.18□□□□□ -1.42
NUP49YGL172W TAD3Q9URQ3 322 aa6.18□□□□□ -1.42
NUP49YGL172W RHO1P06780 209 aaKnown RBP6.17□□□□□ -1.42
NUP49YGL172W ADE5,7P07244 802 aaKnown RBP6.17□□□□□ -1.42
NUP49YGL172W YOL163WP0CF20 169 aa6.17□□□□□ -1.42
NUP49YGL172W MRPL6P32904 214 aa6.17□□□□□ -1.42
NUP49YGL172W YPT7P32939 208 aa6.17□□□□□ -1.42
NUP49YGL172W YKL107WP34251 309 aa6.17□□□□□ -1.42
NUP49YGL172W KAE1P36132 386 aa6.17□□□□□ -1.42
NUP49YGL172W NSG1P38837 291 aa6.17□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 75.9 ms