RNA–Protein interactions for RNA: YFR052W

RPN12, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeast

Gene RPN12, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN12	YFR052W	GPI1	P53306	609 aa		4.62	□□□□□ -1.67
RPN12	YFR052W	CTL1	Q03220	320 aa	Known RBP	4.62	□□□□□ -1.67
RPN12	YFR052W	SPC24	Q04477	213 aa		4.62	□□□□□ -1.67
RPN12	YFR052W	MFG1	Q07684	458 aa		4.62	□□□□□ -1.67
RPN12	YFR052W	GPN2	Q08726	347 aa	Predicted RBP	4.62	□□□□□ -1.67
RPN12	YFR052W	REX3	Q12090	404 aa		4.62	□□□□□ -1.67
RPN12	YFR052W	TAD3	Q9URQ3	322 aa		4.62	□□□□□ -1.67
RPN12	YFR052W	YLR358C	O13565	187 aa		4.61	□□□□□ -1.67
RPN12	YFR052W	TIM9	O74700	87 aa		4.61	□□□□□ -1.67
RPN12	YFR052W	ARF1	P11076	181 aa	Known RBP	4.61	□□□□□ -1.67
RPN12	YFR052W	PMR1	P13586	950 aa		4.61	□□□□□ -1.67
RPN12	YFR052W	CBS1	P14066	229 aa		4.61	□□□□□ -1.67
RPN12	YFR052W	NCP1	P16603	691 aa	Known RBP	4.61	□□□□□ -1.67
RPN12	YFR052W	CLB3	P24870	427 aa		4.61	□□□□□ -1.67
RPN12	YFR052W	YHR218W	P38899	603 aa		4.61	□□□□□ -1.67
RPN12	YFR052W	YEL057C	P39983	233 aa		4.61	□□□□□ -1.67
RPN12	YFR052W	SEC24	P40482	926 aa	Known RBP	4.61	□□□□□ -1.67
RPN12	YFR052W	UBX6	P47049	396 aa		4.61	□□□□□ -1.67
RPN12	YFR052W	NOP9	P47077	666 aa	Known RBP	4.61	□□□□□ -1.67
RPN12	YFR052W	AAD10	P47182	288 aa		4.61	□□□□□ -1.67
RPN12	YFR052W	TOS2	P50078	622 aa		4.61	□□□□□ -1.67
RPN12	YFR052W	GET1	P53192	235 aa		4.61	□□□□□ -1.67
RPN12	YFR052W	TNA1	P53322	534 aa		4.61	□□□□□ -1.67
RPN12	YFR052W	DCP2	P53550	970 aa	Known RBP	4.61	□□□□□ -1.67
RPN12	YFR052W	ATG4	P53867	494 aa		4.61	□□□□□ -1.67
RPN12	YFR052W	MTQ1	P53944	314 aa		4.61	□□□□□ -1.67
RPN12	YFR052W	YLR460C	P54007	376 aa		4.61	□□□□□ -1.67
RPN12	YFR052W	SWP1	Q02795	286 aa		4.61	□□□□□ -1.67
RPN12	YFR052W	YDR541C	Q03049	344 aa		4.61	□□□□□ -1.67
RPN12	YFR052W	RSC9	Q03124	581 aa		4.61	□□□□□ -1.67
RPN12	YFR052W	YMR102C	Q03177	834 aa		4.61	□□□□□ -1.67
RPN12	YFR052W	YKU80	Q04437	629 aa		4.61	□□□□□ -1.67
RPN12	YFR052W	PAL1	Q05518	499 aa	Known RBP	4.61	□□□□□ -1.67
RPN12	YFR052W	SSQ1	Q05931	657 aa	Predicted RBP	4.61	□□□□□ -1.67
RPN12	YFR052W	YPL225W	Q08971	146 aa	Known RBP	4.61	□□□□□ -1.67
RPN12	YFR052W	NPC2	Q12408	173 aa		4.61	□□□□□ -1.67
RPN12	YFR052W	PAR32	Q12515	295 aa	Known RBP	4.61	□□□□□ -1.67
RPN12	YFR052W	ADF1	Q2V2Q1	113 aa		4.61	□□□□□ -1.67
RPN12	YFR052W	RAD7	P06779	565 aa		4.6	□□□□□ -1.67
RPN12	YFR052W	ADE5,7	P07244	802 aa	Known RBP	4.6	□□□□□ -1.67
RPN12	YFR052W	MSS18	P08593	268 aa		4.6	□□□□□ -1.67
RPN12	YFR052W	RNA1	P11745	407 aa	Known RBP	4.6	□□□□□ -1.67
RPN12	YFR052W	GAL3	P13045	520 aa		4.6	□□□□□ -1.67
RPN12	YFR052W	THR1	P17423	357 aa	Known RBP	4.6	□□□□□ -1.67
RPN12	YFR052W	RPS1B	P23248	255 aa	Known RBP	4.6	□□□□□ -1.67
RPN12	YFR052W	CTR86	P25355	563 aa		4.6	□□□□□ -1.67
RPN12	YFR052W	PEX3	P28795	441 aa		4.6	□□□□□ -1.67
RPN12	YFR052W	DEP1	P31385	405 aa		4.6	□□□□□ -1.67
RPN12	YFR052W	DPH5	P32469	300 aa	Predicted RBP	4.6	□□□□□ -1.67
RPN12	YFR052W	PDB1	P32473	366 aa	Known RBP	4.6	□□□□□ -1.67
RPN12	YFR052W	GSH1	P32477	678 aa		4.6	□□□□□ -1.67
RPN12	YFR052W	GDH2	P33327	1092 aa	Known RBP	4.6	□□□□□ -1.67
RPN12	YFR052W	PDX3	P38075	228 aa	Known RBP	4.6	□□□□□ -1.67
RPN12	YFR052W	FZO1	P38297	855 aa		4.6	□□□□□ -1.67
RPN12	YFR052W	BIG1	P38813	335 aa		4.6	□□□□□ -1.67
RPN12	YFR052W	DSS1	P39112	969 aa		4.6	□□□□□ -1.67
RPN12	YFR052W	YNL195C	P40168	261 aa		4.6	□□□□□ -1.67
RPN12	YFR052W	GID8	P40208	455 aa		4.6	□□□□□ -1.67
RPN12	YFR052W	SMK1	P41808	388 aa		4.6	□□□□□ -1.67
RPN12	YFR052W	SHR5	P41912	237 aa		4.6	□□□□□ -1.67
RPN12	YFR052W	ECO1	P43605	281 aa		4.6	□□□□□ -1.67
RPN12	YFR052W	RPE1	P46969	238 aa		4.6	□□□□□ -1.67
RPN12	YFR052W	BIT61	P47041	543 aa		4.6	□□□□□ -1.67
RPN12	YFR052W	RNH70	P53331	553 aa		4.6	□□□□□ -1.67
RPN12	YFR052W	COS6	P53344	381 aa		4.6	□□□□□ -1.67
RPN12	YFR052W	IGO1	P53897	168 aa		4.6	□□□□□ -1.67
RPN12	YFR052W	YPL068C	Q02749	293 aa		4.6	□□□□□ -1.67
RPN12	YFR052W	SRP1	Q02821	542 aa	Known RBP	4.6	□□□□□ -1.67
RPN12	YFR052W	NAN1	Q02931	896 aa	Known RBP	4.6	□□□□□ -1.67
RPN12	YFR052W	FDC1	Q03034	503 aa		4.6	□□□□□ -1.67
RPN12	YFR052W	UGO1	Q03327	502 aa		4.6	□□□□□ -1.67
RPN12	YFR052W	CGI121	Q03705	181 aa	Known RBP	4.6	□□□□□ -1.67
RPN12	YFR052W	SPC2	Q04969	178 aa		4.6	□□□□□ -1.67
RPN12	YFR052W	SPO77	Q06134	477 aa		4.6	□□□□□ -1.67
RPN12	YFR052W	GPI11	Q06636	219 aa		4.6	□□□□□ -1.67
RPN12	YFR052W	RSC58	Q07979	502 aa		4.6	□□□□□ -1.67
RPN12	YFR052W	ULA1	Q12059	462 aa		4.6	□□□□□ -1.67
RPN12	YFR052W	YOR342C	Q12182	319 aa		4.6	□□□□□ -1.67
RPN12	YFR052W	WTM1	Q12363	437 aa	Known RBP	4.6	□□□□□ -1.67
RPN12	YFR052W	RPL24A	P04449	155 aa	Known RBP	4.59	□□□□□ -1.67
RPN12	YFR052W	GPH1	P06738	902 aa	Known RBP	4.59	□□□□□ -1.67
RPN12	YFR052W	REC107	P21651	314 aa		4.59	□□□□□ -1.67
RPN12	YFR052W	NTG1	P31378	399 aa		4.59	□□□□□ -1.67
RPN12	YFR052W	ARP2	P32381	391 aa	Known RBP	4.59	□□□□□ -1.67
RPN12	YFR052W	YOR062C	P36025	268 aa		4.59	□□□□□ -1.67
RPN12	YFR052W	SKG1	P36169	355 aa		4.59	□□□□□ -1.67
RPN12	YFR052W	EXO84	P38261	753 aa		4.59	□□□□□ -1.67
RPN12	YFR052W	TSL1	P38427	1098 aa	Known RBP	4.59	□□□□□ -1.67
RPN12	YFR052W	APE4	P38821	490 aa		4.59	□□□□□ -1.67
RPN12	YFR052W	ALG5	P40350	334 aa		4.59	□□□□□ -1.67
RPN12	YFR052W	YIL169C	P40442	995 aa		4.59	□□□□□ -1.67
RPN12	YFR052W	YFR054C	P43622	192 aa		4.59	□□□□□ -1.67
RPN12	YFR052W	EMC2	P47133	292 aa	Known RBP	4.59	□□□□□ -1.67
RPN12	YFR052W	PGU1	P47180	361 aa		4.59	□□□□□ -1.67
RPN12	YFR052W	HNT2	P49775	206 aa		4.59	□□□□□ -1.67
RPN12	YFR052W	TYW3	P53177	273 aa		4.59	□□□□□ -1.67
RPN12	YFR052W	PBP1	P53297	722 aa	Known RBP	4.59	□□□□□ -1.67
RPN12	YFR052W	HOL1	P53389	586 aa		4.59	□□□□□ -1.67
RPN12	YFR052W	DBP6	P53734	629 aa	Known RBP	4.59	□□□□□ -1.67
RPN12	YFR052W	TPS1	Q00764	495 aa	Known RBP	4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 33.3 ms