RNA–Protein interactions for RNA: YFL028C

CAF16, Transcript of Part of evolutionarily-conserved CCR4-NOT regulatory complex, yeastyeast

Gene CAF16, Length 870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF16YFL028C YPL199CQ08954 240 aa4.36□□□□□ -1.71
CAF16YFL028C SGT2Q12118 346 aaKnown RBP4.36□□□□□ -1.71
CAF16YFL028C GIS3Q12418 502 aa4.36□□□□□ -1.71
CAF16YFL028C SFG1Q12507 346 aa4.36□□□□□ -1.71
CAF16YFL028C RPL20AP0CX23 172 aaKnown RBP4.35□□□□□ -1.71
CAF16YFL028C RPL20BP0CX24 172 aaPredicted RBP4.35□□□□□ -1.71
CAF16YFL028C PHO13P19881 312 aa4.35□□□□□ -1.71
CAF16YFL028C ITR1P30605 584 aa4.35□□□□□ -1.71
CAF16YFL028C ATS1P31386 333 aa4.35□□□□□ -1.71
CAF16YFL028C SKN1P33336 771 aa4.35□□□□□ -1.71
CAF16YFL028C PMU1P36069 295 aa4.35□□□□□ -1.71
CAF16YFL028C YHR177WP38867 453 aa4.35□□□□□ -1.71
CAF16YFL028C OSW5P40219 148 aa4.35□□□□□ -1.71
CAF16YFL028C CPR7P47103 393 aa4.35□□□□□ -1.71
CAF16YFL028C PRM1P53835 661 aa4.35□□□□□ -1.71
CAF16YFL028C MPS1P54199 764 aa4.35□□□□□ -1.71
CAF16YFL028C NUP53Q03790 475 aa4.35□□□□□ -1.71
CAF16YFL028C RRP9Q06506 573 aaKnown RBP4.35□□□□□ -1.71
CAF16YFL028C CDD1Q06549 142 aa4.35□□□□□ -1.71
CAF16YFL028C NOP6Q07623 225 aaKnown RBP4.35□□□□□ -1.71
CAF16YFL028C SRL2Q12020 392 aa4.35□□□□□ -1.71
CAF16YFL028C RRT12P25381 491 aa4.34□□□□□ -1.71
CAF16YFL028C SEC1P30619 724 aaKnown RBP4.34□□□□□ -1.71
CAF16YFL028C SUR1P33300 382 aa4.34□□□□□ -1.71
CAF16YFL028C RFS1P38234 210 aaKnown RBP4.34□□□□□ -1.71
CAF16YFL028C MST28P39552 234 aa4.34□□□□□ -1.71
CAF16YFL028C EFM3P47163 339 aa4.34□□□□□ -1.71
CAF16YFL028C SSN8P47821 323 aa4.34□□□□□ -1.71
CAF16YFL028C GPI8P49018 411 aa4.34□□□□□ -1.71
CAF16YFL028C PMT5P52867 743 aa4.34□□□□□ -1.71
CAF16YFL028C MPS2P53159 387 aa4.34□□□□□ -1.71
CAF16YFL028C URC2Q04411 772 aa4.34□□□□□ -1.71
CAF16YFL028C SMA2Q04658 369 aa4.34□□□□□ -1.71
CAF16YFL028C PEX27Q08580 376 aa4.34□□□□□ -1.71
CAF16YFL028C ABP140Q08641 628 aaKnown RBP4.34□□□□□ -1.71
CAF16YFL028C AYT1Q12226 474 aa4.34□□□□□ -1.71
CAF16YFL028C RPL15AP05748 204 aaKnown RBP4.33□□□□□ -1.72
CAF16YFL028C HAP2P06774 265 aa4.33□□□□□ -1.72
CAF16YFL028C RPL12AP0CX53 165 aaKnown RBP4.33□□□□□ -1.72
CAF16YFL028C RPL12BP0CX54 165 aa4.33□□□□□ -1.72
CAF16YFL028C CDC23P16522 626 aa4.33□□□□□ -1.72
CAF16YFL028C SLY1P22213 666 aa4.33□□□□□ -1.72
CAF16YFL028C DAL2P25335 343 aa4.33□□□□□ -1.72
CAF16YFL028C SRB2P34162 210 aa4.33□□□□□ -1.72
CAF16YFL028C RPR2P40571 144 aa4.33□□□□□ -1.72
CAF16YFL028C NOP13P53883 403 aaKnown RBP RIP-Chip data4.33□□□□□ -1.72not detected
CAF16YFL028C YPR078CQ06813 372 aa4.33□□□□□ -1.72
CAF16YFL028C AAD15Q08361 143 aa4.33□□□□□ -1.72
CAF16YFL028C DAP1Q12091 152 aa4.33□□□□□ -1.72
CAF16YFL028C YOR012WQ12351 137 aa4.33□□□□□ -1.72
CAF16YFL028C SET6Q12529 373 aa4.33□□□□□ -1.72
CAF16YFL028C YDR034W-BQ6Q5X2 51 aa4.33□□□□□ -1.72
CAF16YFL028C AI5_BETAQ9ZZX0 354 aa4.33□□□□□ -1.72
CAF16YFL028C ATR1P13090 542 aa4.32□□□□□ -1.72
CAF16YFL028C SAG1P20840 650 aa4.32□□□□□ -1.72
CAF16YFL028C PUT3P25502 979 aaPredicted RBP4.32□□□□□ -1.72
CAF16YFL028C COX13P32799 129 aa4.32□□□□□ -1.72
CAF16YFL028C CSG2P35206 410 aa4.32□□□□□ -1.72
CAF16YFL028C KKQ8P36004 724 aa4.32□□□□□ -1.72
CAF16YFL028C HMT1P38074 348 aa4.32□□□□□ -1.72
CAF16YFL028C ATP3P38077 311 aaKnown RBP4.32□□□□□ -1.72
CAF16YFL028C CAF40P53829 373 aa4.32□□□□□ -1.72
CAF16YFL028C PRO2P54885 456 aaKnown RBP4.32□□□□□ -1.72
CAF16YFL028C ASA1Q06822 443 aa4.32□□□□□ -1.72
CAF16YFL028C PLP2Q12017 286 aa4.32□□□□□ -1.72
CAF16YFL028C RTC5Q12108 567 aaKnown RBP4.32□□□□□ -1.72
CAF16YFL028C MDY2Q12285 212 aa4.32□□□□□ -1.72
CAF16YFL028C HEM2P05373 342 aa4.31□□□□□ -1.72
CAF16YFL028C VPS3P23643 1011 aa4.31□□□□□ -1.72
CAF16YFL028C EFB1P32471 206 aaKnown RBP4.31□□□□□ -1.72
CAF16YFL028C RIB5P38145 238 aa4.31□□□□□ -1.72
CAF16YFL028C RPH1P39956 796 aa4.31□□□□□ -1.72
CAF16YFL028C MEP1P40260 492 aa4.31□□□□□ -1.72
CAF16YFL028C ATM1P40416 690 aa4.31□□□□□ -1.72
CAF16YFL028C OST1P41543 476 aaKnown RBP4.31□□□□□ -1.72
CAF16YFL028C YJR054WP47114 497 aa4.31□□□□□ -1.72
CAF16YFL028C YPL068CQ02749 293 aa4.31□□□□□ -1.72
CAF16YFL028C YML122CQ03207 126 aa4.31□□□□□ -1.72
CAF16YFL028C RRB1Q04225 511 aaKnown RBP4.31□□□□□ -1.72
CAF16YFL028C MGR3Q04472 501 aa4.31□□□□□ -1.72
CAF16YFL028C NCA2Q12374 616 aa4.31□□□□□ -1.72
CAF16YFL028C ATP1P07251 545 aaKnown RBP4.3□□□□□ -1.72
CAF16YFL028C CDC33P07260 213 aaKnown RBP4.3□□□□□ -1.72
CAF16YFL028C DOA1P36037 715 aa4.3□□□□□ -1.72
CAF16YFL028C RRF1P38771 230 aa4.3□□□□□ -1.72
CAF16YFL028C SHQ1P40486 507 aaPredicted RBP4.3□□□□□ -1.72
CAF16YFL028C SNL1P40548 159 aa4.3□□□□□ -1.72
CAF16YFL028C MKT1P40850 830 aaKnown RBP4.3□□□□□ -1.72
CAF16YFL028C STE24P47154 453 aa4.3□□□□□ -1.72
CAF16YFL028C TOS2P50078 622 aa4.3□□□□□ -1.72
CAF16YFL028C GOR1P53839 350 aa4.3□□□□□ -1.72
CAF16YFL028C MZM1Q03429 123 aaPredicted RBP4.3□□□□□ -1.72
CAF16YFL028C ERP1Q05359 219 aaKnown RBP4.3□□□□□ -1.72
CAF16YFL028C SNX3Q08826 162 aaKnown RBP4.3□□□□□ -1.72
CAF16YFL028C RPS3P05750 240 aaKnown RBP4.29□□□□□ -1.72
CAF16YFL028C TPK3P05986 398 aa4.29□□□□□ -1.72
CAF16YFL028C MAS1P10507 462 aa4.29□□□□□ -1.72
CAF16YFL028C ARF1P11076 181 aaKnown RBP4.29□□□□□ -1.72
CAF16YFL028C LOS1P33418 1100 aaPredicted RBP4.29□□□□□ -1.72
CAF16YFL028C SPT10P35208 640 aa4.29□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms