RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W YLH47Q06493 454 aa4.32□□□□□ -1.72
DEG1YFL001W MRPL35Q06678 367 aa4.32□□□□□ -1.72
DEG1YFL001W VAC14Q06708 880 aa4.32□□□□□ -1.72
DEG1YFL001W YOL075CQ08234 1294 aa4.32□□□□□ -1.72
DEG1YFL001W SNX3Q08826 162 aaKnown RBP4.32□□□□□ -1.72
DEG1YFL001W DCP1Q12517 231 aaPredicted RBP4.32□□□□□ -1.72
DEG1YFL001W YOR338WQ99326 363 aa4.32□□□□□ -1.72
DEG1YFL001W KRE5P22023 1365 aa4.32□□□□□ -1.72
DEG1YFL001W CFT1Q06632 1357 aaKnown RBP4.32□□□□□ -1.72
DEG1YFL001W BCK1Q01389 1478 aa4.32□□□□□ -1.72
DEG1YFL001W UGA1P17649 471 aa4.31□□□□□ -1.72
DEG1YFL001W SAR1P20606 190 aaKnown RBP4.31□□□□□ -1.72
DEG1YFL001W SPS22P25380 463 aa4.31□□□□□ -1.72
DEG1YFL001W MXR2P25566 168 aa4.31□□□□□ -1.72
DEG1YFL001W ZUO1P32527 433 aaKnown RBP4.31□□□□□ -1.72
DEG1YFL001W MNS1P32906 549 aa4.31□□□□□ -1.72
DEG1YFL001W MRPS5P33759 307 aa4.31□□□□□ -1.72
DEG1YFL001W PEX32P38292 413 aa4.31□□□□□ -1.72
DEG1YFL001W JLP2P40206 208 aa4.31□□□□□ -1.72
DEG1YFL001W SEC9P40357 651 aa4.31□□□□□ -1.72
DEG1YFL001W OST1P41543 476 aaKnown RBP4.31□□□□□ -1.72
DEG1YFL001W ABM1P47146 123 aa4.31□□□□□ -1.72
DEG1YFL001W VOA1P53262 265 aa4.31□□□□□ -1.72
DEG1YFL001W COS1P53822 381 aa4.31□□□□□ -1.72
DEG1YFL001W ALF1P53904 254 aa4.31□□□□□ -1.72
DEG1YFL001W HXT11P54862 567 aa4.31□□□□□ -1.72
DEG1YFL001W ERV41Q04651 352 aa4.31□□□□□ -1.72
DEG1YFL001W RTT103Q05543 409 aa4.31□□□□□ -1.72
DEG1YFL001W AFT2Q08957 416 aa4.31□□□□□ -1.72
DEG1YFL001W DAP1Q12091 152 aa4.31□□□□□ -1.72
DEG1YFL001W PAA1Q12447 191 aaKnown RBP4.31□□□□□ -1.72
DEG1YFL001W SET6Q12529 373 aa4.31□□□□□ -1.72
DEG1YFL001W RGS2Q99188 309 aa4.31□□□□□ -1.72
DEG1YFL001W TY1B-NL2Q99337 1749 aaKnown RBP4.31□□□□□ -1.72
DEG1YFL001W RPL18AP0CX49 186 aaKnown RBP4.3□□□□□ -1.72
DEG1YFL001W RPL18BP0CX50 186 aaKnown RBP4.3□□□□□ -1.72
DEG1YFL001W BUD2P33314 1104 aa4.3□□□□□ -1.72
DEG1YFL001W GPX2P38143 162 aa4.3□□□□□ -1.72
DEG1YFL001W RPH1P39956 796 aa4.3□□□□□ -1.72
DEG1YFL001W LOH1P47055 219 aa4.3□□□□□ -1.72
DEG1YFL001W KAP95Q06142 861 aaKnown RBP4.3□□□□□ -1.72
DEG1YFL001W APC2Q12440 853 aa4.3□□□□□ -1.72
DEG1YFL001W FAR1P21268 830 aa4.29□□□□□ -1.72
DEG1YFL001W CIN8P27895 1000 aa4.29□□□□□ -1.72
DEG1YFL001W PAD1P33751 242 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
DEG1YFL001W TIR2P33890 251 aa4.29□□□□□ -1.72
DEG1YFL001W NAT2P37293 288 aa4.29□□□□□ -1.72
DEG1YFL001W YBP1P38315 674 aa4.29□□□□□ -1.72
DEG1YFL001W GEP4P38812 185 aa4.29□□□□□ -1.72
DEG1YFL001W PEX18P38855 283 aa4.29□□□□□ -1.72
DEG1YFL001W CCT4P39078 528 aaKnown RBP4.29□□□□□ -1.72
DEG1YFL001W BTT1P40314 149 aaPredicted RBP4.29□□□□□ -1.72
DEG1YFL001W GTO1P48239 356 aa4.29□□□□□ -1.72
DEG1YFL001W COS10P52924 374 aa4.29□□□□□ -1.72
DEG1YFL001W APC4Q04601 652 aa4.29□□□□□ -1.72
DEG1YFL001W NAT4Q04751 285 aa4.29□□□□□ -1.72
DEG1YFL001W SHS1Q07657 551 aa4.29□□□□□ -1.72
DEG1YFL001W APC5Q08683 685 aa4.29□□□□□ -1.72
DEG1YFL001W THP3Q12049 470 aaKnown RBP4.29□□□□□ -1.72
DEG1YFL001W PHA2P32452 334 aa4.28□□□□□ -1.72
DEG1YFL001W MUD1P32605 298 aaKnown RBP4.28□□□□□ -1.72
DEG1YFL001W YKL070WP36087 169 aa4.28□□□□□ -1.72
DEG1YFL001W MTC6P38849 526 aa4.28□□□□□ -1.72
DEG1YFL001W YGL185CP53100 379 aa4.28□□□□□ -1.72
DEG1YFL001W RRN5Q02983 363 aa4.28□□□□□ -1.72
DEG1YFL001W MDM36Q06820 579 aa4.28□□□□□ -1.72
DEG1YFL001W LDB17Q12342 491 aa4.28□□□□□ -1.72
DEG1YFL001W CAR2P07991 424 aaKnown RBP4.27□□□□□ -1.73
DEG1YFL001W YUR1P26725 428 aa4.27□□□□□ -1.73
DEG1YFL001W MRP4P32902 394 aa4.27□□□□□ -1.73
DEG1YFL001W UTP25P40498 721 aaKnown RBP4.27□□□□□ -1.73
DEG1YFL001W LST7P53237 242 aa4.27□□□□□ -1.73
DEG1YFL001W CWC22P53333 577 aaKnown RBP4.27□□□□□ -1.73
DEG1YFL001W GOR1P53839 350 aa4.27□□□□□ -1.73
DEG1YFL001W NDE2Q07500 545 aa4.27□□□□□ -1.73
DEG1YFL001W GAT3Q07928 141 aa4.27□□□□□ -1.73
DEG1YFL001W NUP192P47054 1683 aa4.27□□□□□ -1.73
DEG1YFL001W TY3B-IQ7LHG5 1498 aaKnown RBP4.27□□□□□ -1.73
DEG1YFL001W STE2D6VTK4 431 aa4.26□□□□□ -1.73
DEG1YFL001W CPR1P14832 162 aaKnown RBP4.26□□□□□ -1.73
DEG1YFL001W ARF2P19146 181 aaKnown RBP4.26□□□□□ -1.73
DEG1YFL001W UTR1P21373 530 aa4.26□□□□□ -1.73
DEG1YFL001W MEK1P24719 497 aaPredicted RBP4.26□□□□□ -1.73
DEG1YFL001W YUH1P35127 236 aa4.26□□□□□ -1.73
DEG1YFL001W IST2P38250 946 aa4.26□□□□□ -1.73
DEG1YFL001W YHK8P38776 514 aa4.26□□□□□ -1.73
DEG1YFL001W ATG7P38862 630 aa4.26□□□□□ -1.73
DEG1YFL001W SEC27P41811 889 aaKnown RBP4.26□□□□□ -1.73
DEG1YFL001W SAD1P43589 448 aa4.26□□□□□ -1.73
DEG1YFL001W NAS6P50086 228 aa4.26□□□□□ -1.73
DEG1YFL001W MND1P53102 219 aa4.26□□□□□ -1.73
DEG1YFL001W TRM112P53738 135 aaPredicted RBP4.26□□□□□ -1.73
DEG1YFL001W BUR2Q05949 395 aa4.26□□□□□ -1.73
DEG1YFL001W RLP24Q07915 199 aaKnown RBP4.26□□□□□ -1.73
DEG1YFL001W AHC1Q12433 566 aa4.26□□□□□ -1.73
DEG1YFL001W USO1P25386 1790 aa4.26□□□□□ -1.73
DEG1YFL001W RAD1P06777 1100 aa4.25□□□□□ -1.73
DEG1YFL001W SSA3P09435 649 aaKnown RBP4.25□□□□□ -1.73
DEG1YFL001W HEM15P16622 393 aa4.25□□□□□ -1.73
DEG1YFL001W MCK1P21965 375 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 83.7 ms