RNA–Protein interactions for RNA: YDR079C-A

TFB5, Transcript of Component of RNA polymerase II general transcription factor TFIIH, yeastyeast

Gene TFB5, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB5YDR079C-A RMT2Q03305 412 aa-0.2□□□□□ -2.44
TFB5YDR079C-A MZM1Q03429 123 aaPredicted RBP-0.2□□□□□ -2.44
TFB5YDR079C-A SNX41Q04053 625 aa-0.2□□□□□ -2.44
TFB5YDR079C-A IOC4Q04213 475 aa-0.2□□□□□ -2.44
TFB5YDR079C-A HSP31Q04432 237 aa-0.2□□□□□ -2.44
TFB5YDR079C-A YDR278CQ05612 105 aa-0.2□□□□□ -2.44
TFB5YDR079C-A ECM38Q05902 660 aaPredicted RBP-0.2□□□□□ -2.44
TFB5YDR079C-A YLR179CQ06252 201 aaKnown RBP-0.2□□□□□ -2.44
TFB5YDR079C-A SKG3Q06315 1026 aa-0.2□□□□□ -2.44
TFB5YDR079C-A MLC2Q06580 163 aa-0.2□□□□□ -2.44
TFB5YDR079C-A IPK1Q06667 281 aa-0.2□□□□□ -2.44
TFB5YDR079C-A PRP11Q07350 266 aaPredicted RBP-0.2□□□□□ -2.44
TFB5YDR079C-A NOP6Q07623 225 aaKnown RBP-0.2□□□□□ -2.44
TFB5YDR079C-A TEN1Q07921 160 aa-0.2□□□□□ -2.44
TFB5YDR079C-A IRC23Q08416 157 aa-0.2□□□□□ -2.44
TFB5YDR079C-A YNG1Q08465 219 aa-0.2□□□□□ -2.44
TFB5YDR079C-A APC5Q08683 685 aa-0.2□□□□□ -2.44
TFB5YDR079C-A YOR376WQ08900 122 aa-0.2□□□□□ -2.44
TFB5YDR079C-A FIT2Q08906 153 aa-0.2□□□□□ -2.44
TFB5YDR079C-A TIR4Q12218 487 aaPredicted RBP-0.2□□□□□ -2.44
TFB5YDR079C-A FOL3Q12676 427 aaPredicted RBP-0.2□□□□□ -2.44
TFB5YDR079C-A YBL112CQ3E7Y4 105 aa-0.2□□□□□ -2.44
TFB5YDR079C-A NOP14Q99207 810 aaKnown RBP-0.2□□□□□ -2.44
TFB5YDR079C-A Q0017Q9ZZX8 53 aa-0.2□□□□□ -2.44
TFB5YDR079C-A TY1B-BLQ12490 1755 aa-0.2□□□□□ -2.44
TFB5YDR079C-A RRP5Q05022 1729 aaKnown RBP-0.21□□□□□ -2.44
TFB5YDR079C-A TY1B-DR6P0C2I3 1755 aa-0.21□□□□□ -2.44
TFB5YDR079C-A TY1B-LR2P0C2I5 1755 aa-0.21□□□□□ -2.44
TFB5YDR079C-A TY1B-LR3P0C2I6 1755 aaKnown RBP-0.21□□□□□ -2.44
TFB5YDR079C-A TY1B-PR2P0C2J0 1756 aa-0.21□□□□□ -2.44
TFB5YDR079C-A TY1B-PR3P0C2J1 1755 aaKnown RBP-0.21□□□□□ -2.44
TFB5YDR079C-A TY1B-JR1P47098 1755 aa-0.21□□□□□ -2.44
TFB5YDR079C-A TY1B-ML2Q03434 1755 aaKnown RBP-0.21□□□□□ -2.44
TFB5YDR079C-A TY1B-ER1Q03612 1755 aa-0.21□□□□□ -2.44
TFB5YDR079C-A TY1B-BRQ12193 1756 aa-0.21□□□□□ -2.44
TFB5YDR079C-A TY1B-OLQ12273 1755 aa-0.21□□□□□ -2.44
TFB5YDR079C-A TY1B-PLQ12414 1755 aaKnown RBP-0.21□□□□□ -2.44
TFB5YDR079C-A TY4B-HP0C2J7 1802 aa-0.21□□□□□ -2.44
TFB5YDR079C-A Q0255P03881 472 aa-0.21□□□□□ -2.44
TFB5YDR079C-A GAL1P04385 528 aa-0.21□□□□□ -2.44
TFB5YDR079C-A GAL7P08431 366 aa-0.21□□□□□ -2.44
TFB5YDR079C-A YDR034C-AP0C289 58 aa-0.21□□□□□ -2.44
TFB5YDR079C-A YKR104WP0CE69 306 aa-0.21□□□□□ -2.44
TFB5YDR079C-A RPS24AP0CX31 135 aaKnown RBP-0.21□□□□□ -2.44
TFB5YDR079C-A RPS24BP0CX32 135 aaKnown RBP-0.21□□□□□ -2.44
TFB5YDR079C-A SAM1P10659 382 aaKnown RBP-0.21□□□□□ -2.44
TFB5YDR079C-A TIR1P10863 254 aa-0.21□□□□□ -2.44
TFB5YDR079C-A PEP5P12868 1029 aa-0.21□□□□□ -2.44
TFB5YDR079C-A HSC82P15108 705 aaKnown RBP-0.21□□□□□ -2.44
TFB5YDR079C-A NCP1P16603 691 aaKnown RBP-0.21□□□□□ -2.44
TFB5YDR079C-A STF2P16965 84 aa-0.21□□□□□ -2.44
TFB5YDR079C-A PRP2P20095 876 aaPredicted RBP-0.21□□□□□ -2.44
TFB5YDR079C-A SLY1P22213 666 aa-0.21□□□□□ -2.44
TFB5YDR079C-A SPO13P23624 291 aa-0.21□□□□□ -2.44
TFB5YDR079C-A ERG8P24521 451 aa-0.21□□□□□ -2.44
TFB5YDR079C-A TY2A-CP25383 438 aa-0.21□□□□□ -2.44
TFB5YDR079C-A DAL80P26343 269 aa-0.21□□□□□ -2.44
TFB5YDR079C-A SUA7P29055 345 aaPredicted RBP-0.21□□□□□ -2.44
TFB5YDR079C-A MEI4P29467 408 aa-0.21□□□□□ -2.44
TFB5YDR079C-A ITR1P30605 584 aa-0.21□□□□□ -2.44
TFB5YDR079C-A FAA1P30624 700 aaKnown RBP-0.21□□□□□ -2.44
TFB5YDR079C-A OCH1P31755 480 aa-0.21□□□□□ -2.44
TFB5YDR079C-A DBF4P32325 704 aa-0.21□□□□□ -2.44
TFB5YDR079C-A KAR9P32526 644 aa-0.21□□□□□ -2.44
TFB5YDR079C-A MNS1P32906 549 aa-0.21□□□□□ -2.44
TFB5YDR079C-A TGL1P34163 548 aa-0.21□□□□□ -2.44
TFB5YDR079C-A TVP38P36164 337 aa-0.21□□□□□ -2.44
TFB5YDR079C-A TCM62P38228 572 aaKnown RBP-0.21□□□□□ -2.44
TFB5YDR079C-A TRM7P38238 310 aaKnown RBP-0.21□□□□□ -2.44
TFB5YDR079C-A ECM8P38246 354 aa-0.21□□□□□ -2.44
TFB5YDR079C-A IST2P38250 946 aa-0.21□□□□□ -2.44
TFB5YDR079C-A YHI9P38765 294 aa-0.21□□□□□ -2.44
TFB5YDR079C-A ATG7P38862 630 aa-0.21□□□□□ -2.44
TFB5YDR079C-A NAB3P38996 802 aaKnown RBP RIP-Chip data-0.21□□□□□ -2.44not detected
TFB5YDR079C-A LYS1P38998 373 aaRIP-Chip data-0.21□□□□□ -2.44not detected
TFB5YDR079C-A NPT1P39683 429 aaKnown RBP-0.21□□□□□ -2.44
TFB5YDR079C-A FLC2P39719 783 aa-0.21□□□□□ -2.44
TFB5YDR079C-A RRT13P40042 185 aa-0.21□□□□□ -2.44
TFB5YDR079C-A PRM5P40476 318 aa-0.21□□□□□ -2.44
TFB5YDR079C-A ARF3P40994 183 aaRIP-Chip data-0.21□□□□□ -2.44not detected
TFB5YDR079C-A POP1P41812 875 aa-0.21□□□□□ -2.44
TFB5YDR079C-A PRM10P42946 383 aa-0.21□□□□□ -2.44
TFB5YDR079C-A YFL051CP43552 160 aa-0.21□□□□□ -2.44
TFB5YDR079C-A LAM5P43560 674 aa-0.21□□□□□ -2.44
TFB5YDR079C-A VTC2P43585 828 aa-0.21□□□□□ -2.44
TFB5YDR079C-A YFH7P43591 353 aa-0.21□□□□□ -2.44
TFB5YDR079C-A ECO1P43605 281 aa-0.21□□□□□ -2.44
TFB5YDR079C-A TRS85P46944 698 aa-0.21□□□□□ -2.44
TFB5YDR079C-A CPR7P47103 393 aa-0.21□□□□□ -2.44
TFB5YDR079C-A YIP5P53108 310 aa-0.21□□□□□ -2.44
TFB5YDR079C-A YGL149WP53116 101 aa-0.21□□□□□ -2.44
TFB5YDR079C-A TOS8P53147 276 aa-0.21□□□□□ -2.44
TFB5YDR079C-A MMS2P53152 137 aa-0.21□□□□□ -2.44
TFB5YDR079C-A CDH1P53197 566 aa-0.21□□□□□ -2.44
TFB5YDR079C-A YGR111WP53265 400 aa-0.21□□□□□ -2.44
TFB5YDR079C-A BUD32P53323 261 aa-0.21□□□□□ -2.44
TFB5YDR079C-A CAB4P53332 305 aa-0.21□□□□□ -2.44
TFB5YDR079C-A ARE2P53629 642 aaKnown RBP-0.21□□□□□ -2.44
TFB5YDR079C-A SMM1P53720 384 aaKnown RBP-0.21□□□□□ -2.44
TFB5YDR079C-A GOR1P53839 350 aa-0.21□□□□□ -2.44
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms