RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR2	YDL042C	LCB3	P47013	409 aa		4.95	□□□□□ -1.62
SIR2	YDL042C	AIM24	P47127	394 aa		4.95	□□□□□ -1.62
SIR2	YDL042C	YMR102C	Q03177	834 aa		4.95	□□□□□ -1.62
SIR2	YDL042C	TPM1	P17536	199 aa	Known RBP	4.94	□□□□□ -1.62
SIR2	YDL042C	SPT10	P35208	640 aa		4.94	□□□□□ -1.62
SIR2	YDL042C	ALF1	P53904	254 aa		4.94	□□□□□ -1.62
SIR2	YDL042C	UTP6	Q02354	440 aa	Known RBP	4.94	□□□□□ -1.62
SIR2	YDL042C	SMC5	Q08204	1093 aa		4.94	□□□□□ -1.62
SIR2	YDL042C	PEX27	Q08580	376 aa		4.94	□□□□□ -1.62
SIR2	YDL042C	YGK3	Q12222	375 aa	Predicted RBP	4.94	□□□□□ -1.62
SIR2	YDL042C	EAF3	Q12432	401 aa		4.94	□□□□□ -1.62
SIR2	YDL042C	AHC1	Q12433	566 aa		4.94	□□□□□ -1.62
SIR2	YDL042C	PIS1	P06197	220 aa	Known RBP	4.93	□□□□□ -1.62
SIR2	YDL042C	CLN3	P13365	580 aa		4.93	□□□□□ -1.62
SIR2	YDL042C	SMI1	P32566	505 aa		4.93	□□□□□ -1.62
SIR2	YDL042C	CSE2	P33308	149 aa		4.93	□□□□□ -1.62
SIR2	YDL042C	YHK8	P38776	514 aa		4.93	□□□□□ -1.62
SIR2	YDL042C	GEP4	P38812	185 aa		4.93	□□□□□ -1.62
SIR2	YDL042C	MAM33	P40513	266 aa		4.93	□□□□□ -1.62
SIR2	YDL042C	RPA34	P47006	233 aa	Predicted RBP	4.93	□□□□□ -1.62
SIR2	YDL042C	TRM112	P53738	135 aa	Predicted RBP	4.93	□□□□□ -1.62
SIR2	YDL042C	YNL143C	P53908	130 aa		4.93	□□□□□ -1.62
SIR2	YDL042C	RRG7	Q08774	242 aa	Predicted RBP	4.93	□□□□□ -1.62
SIR2	YDL042C	FDH1	Q08911	376 aa		4.93	□□□□□ -1.62
SIR2	YDL042C	SFG1	Q12507	346 aa		4.93	□□□□□ -1.62
SIR2	YDL042C	YCR024C-B	Q3E7Z8	88 aa		4.93	□□□□□ -1.62
SIR2	YDL042C	CUE3	P53137	624 aa	Known RBP	4.92	□□□□□ -1.62
SIR2	YDL042C	AQR1	P53943	586 aa		4.92	□□□□□ -1.62
SIR2	YDL042C	PML1	Q07930	204 aa	Predicted RBP	4.92	□□□□□ -1.62
SIR2	YDL042C	ADH2	P00331	348 aa	Known RBP	4.92	□□□□□ -1.62
SIR2	YDL042C	OSM1	P21375	501 aa	Known RBP	4.92	□□□□□ -1.62
SIR2	YDL042C	RDS1	P25611	832 aa		4.92	□□□□□ -1.62
SIR2	YDL042C	ANP1	P32629	500 aa		4.92	□□□□□ -1.62
SIR2	YDL042C	ADA2	Q02336	434 aa		4.92	□□□□□ -1.62
SIR2	YDL042C	TDA1	Q03533	586 aa		4.92	□□□□□ -1.62
SIR2	YDL042C	PRM6	Q04705	352 aa		4.92	□□□□□ -1.62
SIR2	YDL042C	RTN1	Q04947	295 aa	Known RBP	4.92	□□□□□ -1.62
SIR2	YDL042C	IRC25	Q07951	179 aa		4.92	□□□□□ -1.62
SIR2	YDL042C	PSY3	Q12318	242 aa		4.92	□□□□□ -1.62
SIR2	YDL042C	NBL1	Q3E7Y6	73 aa		4.92	□□□□□ -1.62
SIR2	YDL042C	RAD5	P32849	1169 aa	Predicted RBP	4.91	□□□□□ -1.62
SIR2	YDL042C	TIR2	P33890	251 aa		4.91	□□□□□ -1.62
SIR2	YDL042C	UIP5	P36137	443 aa		4.91	□□□□□ -1.62
SIR2	YDL042C	HAC1	P41546	238 aa		4.91	□□□□□ -1.62
SIR2	YDL042C	RIF2	Q06208	395 aa		4.91	□□□□□ -1.62
SIR2	YDL042C	MSI1	P13712	422 aa		4.9	□□□□□ -1.62
SIR2	YDL042C	MSK1	P32048	576 aa		4.9	□□□□□ -1.62
SIR2	YDL042C	YEL043W	P32618	956 aa		4.9	□□□□□ -1.62
SIR2	YDL042C	SWD3	P38123	315 aa		4.9	□□□□□ -1.62
SIR2	YDL042C	SNL1	P40548	159 aa		4.9	□□□□□ -1.62
SIR2	YDL042C	MPS2	P53159	387 aa		4.9	□□□□□ -1.62
SIR2	YDL042C	HRT3	Q12347	344 aa		4.9	□□□□□ -1.62
SIR2	YDL042C	RIM15	P43565	1770 aa		4.9	□□□□□ -1.63
SIR2	YDL042C	STE3	P06783	470 aa		4.89	□□□□□ -1.63
SIR2	YDL042C	EFM3	P47163	339 aa		4.89	□□□□□ -1.63
SIR2	YDL042C	RET3	P53600	189 aa		4.89	□□□□□ -1.63
SIR2	YDL042C	IZH2	Q12442	317 aa		4.89	□□□□□ -1.63
SIR2	YDL042C	HTZ1	Q12692	134 aa	Known RBP	4.89	□□□□□ -1.63
SIR2	YDL042C	TAL1	P15019	335 aa	Known RBP	4.89	□□□□□ -1.63
SIR2	YDL042C	PTK1	P36002	662 aa	Predicted RBP	4.89	□□□□□ -1.63
SIR2	YDL042C	YIL089W	P40500	205 aa		4.89	□□□□□ -1.63
SIR2	YDL042C	ABM1	P47146	123 aa		4.89	□□□□□ -1.63
SIR2	YDL042C	YPR078C	Q06813	372 aa		4.89	□□□□□ -1.63
SIR2	YDL042C	JID1	Q12350	301 aa		4.89	□□□□□ -1.63
SIR2	YDL042C	RPB5	P20434	215 aa		4.88	□□□□□ -1.63
SIR2	YDL042C	MRPL8	P22353	238 aa		4.88	□□□□□ -1.63
SIR2	YDL042C	DBR1	P24309	405 aa	Known RBP	4.88	□□□□□ -1.63
SIR2	YDL042C	MRPL10	P36520	322 aa		4.88	□□□□□ -1.63
SIR2	YDL042C	LYS12	P40495	371 aa	Known RBP	4.88	□□□□□ -1.63
SIR2	YDL042C	NAS2	P40555	220 aa		4.88	□□□□□ -1.63
SIR2	YDL042C	FYV8	P46949	817 aa	Known RBP	4.88	□□□□□ -1.63
SIR2	YDL042C	MST27	P53176	234 aa		4.88	□□□□□ -1.63
SIR2	YDL042C	PDR16	P53860	351 aa	Known RBP	4.88	□□□□□ -1.63
SIR2	YDL042C	YOR338W	Q99326	363 aa		4.88	□□□□□ -1.63
SIR2	YDL042C	THR4	P16120	514 aa	Known RBP	4.87	□□□□□ -1.63
SIR2	YDL042C	VMA2	P16140	517 aa	Known RBP	4.87	□□□□□ -1.63
SIR2	YDL042C	ISY1	P21374	235 aa	Predicted RBP	4.87	□□□□□ -1.63
SIR2	YDL042C	RVS161	P25343	265 aa	Known RBP	4.87	□□□□□ -1.63
SIR2	YDL042C	YHR131C	P38835	850 aa		4.87	□□□□□ -1.63
SIR2	YDL042C	SEC27	P41811	889 aa	Known RBP	4.87	□□□□□ -1.63
SIR2	YDL042C	YFR057W	P43625	151 aa		4.87	□□□□□ -1.63
SIR2	YDL042C	YPR091C	Q06833	770 aa		4.87	□□□□□ -1.63
SIR2	YDL042C	FCY22	Q12119	530 aa		4.87	□□□□□ -1.63
SIR2	YDL042C	YOR012W	Q12351	137 aa		4.87	□□□□□ -1.63
SIR2	YDL042C	MAS1	P10507	462 aa		4.86	□□□□□ -1.63
SIR2	YDL042C	TRX1	P22217	103 aa	Known RBP	4.86	□□□□□ -1.63
SIR2	YDL042C	KRR1	P25586	316 aa	Predicted RBP	4.86	□□□□□ -1.63
SIR2	YDL042C	ECM8	P38246	354 aa		4.86	□□□□□ -1.63
SIR2	YDL042C	PRM1	P53835	661 aa		4.86	□□□□□ -1.63
SIR2	YDL042C	MEX67	Q99257	599 aa	Known RBP	4.86	□□□□□ -1.63
SIR2	YDL042C	SAG1	P20840	650 aa		4.86	□□□□□ -1.63
SIR2	YDL042C	EFB1	P32471	206 aa	Known RBP	4.86	□□□□□ -1.63
SIR2	YDL042C	BIR1	P47134	954 aa		4.86	□□□□□ -1.63
SIR2	YDL042C	YMR310C	Q04867	317 aa	Predicted RBP	4.86	□□□□□ -1.63
SIR2	YDL042C	PAL1	Q05518	499 aa	Known RBP	4.86	□□□□□ -1.63
SIR2	YDL042C	FSH3	Q99369	266 aa		4.86	□□□□□ -1.63
SIR2	YDL042C	MAS2	P11914	482 aa		4.85	□□□□□ -1.63
SIR2	YDL042C	YEL045C	P32616	141 aa		4.85	□□□□□ -1.63
SIR2	YDL042C	AIM10	P39965	576 aa	Known RBP	4.85	□□□□□ -1.63
SIR2	YDL042C	AIM33	Q04516	312 aa		4.85	□□□□□ -1.63

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