RNA–Protein interactions for RNA: YBR254C

TRS20, Transcript of Core component of transport protein particle (TRAPP) complexes I-III, yeastyeast

Gene TRS20, Length 528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS20YBR254C RPL12BP0CX54 165 aa2.11□□□□□ -2.07
TRS20YBR254C VMA2P16140 517 aaKnown RBP2.11□□□□□ -2.07
TRS20YBR254C DAP2P18962 818 aa2.11□□□□□ -2.07
TRS20YBR254C TRX1P22217 103 aaKnown RBP2.11□□□□□ -2.07
TRS20YBR254C UBA1P22515 1024 aaKnown RBP2.11□□□□□ -2.07
TRS20YBR254C KRR1P25586 316 aaPredicted RBP2.11□□□□□ -2.07
TRS20YBR254C ANP1P32629 500 aa2.11□□□□□ -2.07
TRS20YBR254C AGA2P32781 87 aa2.11□□□□□ -2.07
TRS20YBR254C SKT5P34226 696 aa2.11□□□□□ -2.07
TRS20YBR254C MCR1P36060 302 aaKnown RBP2.11□□□□□ -2.07
TRS20YBR254C SMP1P38128 452 aa2.11□□□□□ -2.07
TRS20YBR254C YIL089WP40500 205 aa2.11□□□□□ -2.07
TRS20YBR254C RPA34P47006 233 aaPredicted RBP2.11□□□□□ -2.07
TRS20YBR254C CPR7P47103 393 aa2.11□□□□□ -2.07
TRS20YBR254C STE24P47154 453 aa2.11□□□□□ -2.07
TRS20YBR254C RRN9P53437 365 aa2.11□□□□□ -2.07
TRS20YBR254C TRM112P53738 135 aaPredicted RBP2.11□□□□□ -2.07
TRS20YBR254C PRP38Q00723 242 aaPredicted RBP2.11□□□□□ -2.07
TRS20YBR254C URC2Q04411 772 aa2.11□□□□□ -2.07
TRS20YBR254C YDR115WQ04598 105 aa2.11□□□□□ -2.07
TRS20YBR254C YDR286CQ05530 114 aa2.11□□□□□ -2.07
TRS20YBR254C YLR177WQ06251 628 aa2.11□□□□□ -2.07
TRS20YBR254C YOR376WQ08900 122 aa2.11□□□□□ -2.07
TRS20YBR254C PGC1Q08959 321 aa2.11□□□□□ -2.07
TRS20YBR254C PCL9Q12477 304 aa2.11□□□□□ -2.07
TRS20YBR254C YOL085CQ99345 113 aa2.11□□□□□ -2.07
TRS20YBR254C STF1P01098 86 aa2.1□□□□□ -2.07
TRS20YBR254C OPI3P05375 206 aa2.1□□□□□ -2.07
TRS20YBR254C TPK3P05986 398 aa2.1□□□□□ -2.07
TRS20YBR254C RDS1P25611 832 aa2.1□□□□□ -2.07
TRS20YBR254C POT1P27796 417 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
TRS20YBR254C TOA1P32773 286 aa2.1□□□□□ -2.07
TRS20YBR254C UIP5P36137 443 aa2.1□□□□□ -2.07
TRS20YBR254C SPP381P38282 291 aaPredicted RBP2.1□□□□□ -2.07
TRS20YBR254C LSM12P38828 187 aaKnown RBP2.1□□□□□ -2.07
TRS20YBR254C FYV8P46949 817 aaKnown RBP2.1□□□□□ -2.07
TRS20YBR254C COQ5P49017 307 aa2.1□□□□□ -2.07
TRS20YBR254C VEL1P53058 206 aa2.1□□□□□ -2.07
TRS20YBR254C MPS2P53159 387 aa2.1□□□□□ -2.07
TRS20YBR254C YNR068CP53754 272 aa2.1□□□□□ -2.07
TRS20YBR254C AQR1P53943 586 aa2.1□□□□□ -2.07
TRS20YBR254C REX2P54964 269 aaKnown RBP2.1□□□□□ -2.07
TRS20YBR254C MSC3Q05812 728 aa2.1□□□□□ -2.07
TRS20YBR254C DBP9Q06218 594 aaKnown RBP2.1□□□□□ -2.07
TRS20YBR254C LDS2Q08218 356 aa2.1□□□□□ -2.07
TRS20YBR254C RNH203Q12338 110 aa2.1□□□□□ -2.07
TRS20YBR254C YOP1Q12402 180 aa2.1□□□□□ -2.07
TRS20YBR254C RPS18AP0CX55 146 aaKnown RBP2.09□□□□□ -2.07
TRS20YBR254C RPS18BP0CX56 146 aaPredicted RBP2.09□□□□□ -2.07
TRS20YBR254C ASP3-2P0CX77 362 aa2.09□□□□□ -2.07
TRS20YBR254C ASP3-3P0CX78 362 aa2.09□□□□□ -2.07
TRS20YBR254C ASP3-4P0CX79 362 aa2.09□□□□□ -2.07
TRS20YBR254C ASP3-1P0CZ17 362 aa2.09□□□□□ -2.07
TRS20YBR254C TAL1P15019 335 aaKnown RBP2.09□□□□□ -2.07
TRS20YBR254C TIR2P33890 251 aa2.09□□□□□ -2.07
TRS20YBR254C SIF2P38262 535 aa2.09□□□□□ -2.07
TRS20YBR254C GEP4P38812 185 aa2.09□□□□□ -2.07
TRS20YBR254C SNL1P40548 159 aa2.09□□□□□ -2.07
TRS20YBR254C CUE3P53137 624 aaKnown RBP2.09□□□□□ -2.07
TRS20YBR254C VAC7P53950 1165 aa2.09□□□□□ -2.07
TRS20YBR254C PEX27Q08580 376 aa2.09□□□□□ -2.07
TRS20YBR254C SCH9P11792 824 aaKnown RBP2.08□□□□□ -2.08
TRS20YBR254C THR4P16120 514 aaKnown RBP2.08□□□□□ -2.08
TRS20YBR254C MRPL8P22353 238 aa2.08□□□□□ -2.08
TRS20YBR254C CHA1P25379 360 aaKnown RBP2.08□□□□□ -2.08
TRS20YBR254C PTK1P36002 662 aaPredicted RBP2.08□□□□□ -2.08
TRS20YBR254C ADH5P38113 351 aaKnown RBP2.08□□□□□ -2.08
TRS20YBR254C POP2P39008 433 aa2.08□□□□□ -2.08
TRS20YBR254C ABM1P47146 123 aa2.08□□□□□ -2.08
TRS20YBR254C TRF5P48561 642 aaKnown RBP2.08□□□□□ -2.08
TRS20YBR254C HST4P53688 370 aa2.08□□□□□ -2.08
TRS20YBR254C PRM1P53835 661 aa2.08□□□□□ -2.08
TRS20YBR254C YNL143CP53908 130 aa2.08□□□□□ -2.08
TRS20YBR254C ASA1Q06822 443 aa2.08□□□□□ -2.08
TRS20YBR254C GLE1Q12315 538 aa2.08□□□□□ -2.08
TRS20YBR254C APC2Q12440 853 aa2.08□□□□□ -2.08
TRS20YBR254C STE3P06783 470 aa2.07□□□□□ -2.08
TRS20YBR254C RNA1P11745 407 aaKnown RBP2.07□□□□□ -2.08
TRS20YBR254C TPM1P17536 199 aaKnown RBP2.07□□□□□ -2.08
TRS20YBR254C PSO2P30620 661 aa2.07□□□□□ -2.08
TRS20YBR254C MSK1P32048 576 aa2.07□□□□□ -2.08
TRS20YBR254C EFB1P32471 206 aaKnown RBP2.07□□□□□ -2.08
TRS20YBR254C YEL043WP32618 956 aa2.07□□□□□ -2.08
TRS20YBR254C ECM34P38728 170 aa2.07□□□□□ -2.08
TRS20YBR254C YHR177WP38867 453 aa2.07□□□□□ -2.08
TRS20YBR254C CIN2P46670 268 aa2.07□□□□□ -2.08
TRS20YBR254C EFM3P47163 339 aa2.07□□□□□ -2.08
TRS20YBR254C PMT5P52867 743 aa2.07□□□□□ -2.08
TRS20YBR254C RPN14P53196 417 aa2.07□□□□□ -2.08
TRS20YBR254C UTP6Q02354 440 aaKnown RBP2.07□□□□□ -2.08
TRS20YBR254C RRB1Q04225 511 aaKnown RBP2.07□□□□□ -2.08
TRS20YBR254C YMR310CQ04867 317 aaPredicted RBP2.07□□□□□ -2.08
TRS20YBR254C PSY3Q12318 242 aa2.07□□□□□ -2.08
TRS20YBR254C YOR338WQ99326 363 aa2.07□□□□□ -2.08
TRS20YBR254C MAS1P10507 462 aa2.06□□□□□ -2.08
TRS20YBR254C HMX1P32339 317 aa2.06□□□□□ -2.08
TRS20YBR254C LYS12P40495 371 aaKnown RBP2.06□□□□□ -2.08
TRS20YBR254C RET3P53600 189 aa2.06□□□□□ -2.08
TRS20YBR254C YMR010WQ03687 405 aa2.06□□□□□ -2.08
TRS20YBR254C ARR1Q06596 294 aa2.06□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms