RNA–Protein interactions for RNA: YBR175W

SWD3, Transcript of Essential subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD3, Length 948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD3YBR175W ARF2P19146 181 aaKnown RBP2.67□□□□□ -1.98
SWD3YBR175W FAR1P21268 830 aa2.67□□□□□ -1.98
SWD3YBR175W MRPL8P22353 238 aa2.67□□□□□ -1.98
SWD3YBR175W YCP4P25349 247 aaKnown RBP2.67□□□□□ -1.98
SWD3YBR175W RRT12P25381 491 aa2.67□□□□□ -1.98
SWD3YBR175W COQ3P27680 312 aa2.67□□□□□ -1.98
SWD3YBR175W RME1P32338 300 aaKnown RBP2.67□□□□□ -1.98
SWD3YBR175W MEI5P32489 222 aa2.67□□□□□ -1.98
SWD3YBR175W TMT1P32643 299 aa2.67□□□□□ -1.98
SWD3YBR175W FRE2P36033 711 aa2.67□□□□□ -1.98
SWD3YBR175W RPC37P36121 282 aa2.67□□□□□ -1.98
SWD3YBR175W MAL32P38158 584 aa2.67□□□□□ -1.98
SWD3YBR175W CCT4P39078 528 aaKnown RBP2.67□□□□□ -1.98
SWD3YBR175W YRB2P40517 327 aa2.67□□□□□ -1.98
SWD3YBR175W IRC7P43623 340 aa2.67□□□□□ -1.98
SWD3YBR175W TRF5P48561 642 aaKnown RBP2.67□□□□□ -1.98
SWD3YBR175W TAF6P53040 516 aa2.67□□□□□ -1.98
SWD3YBR175W HOP2P53187 214 aa2.67□□□□□ -1.98
SWD3YBR175W PXR1P53335 271 aaPredicted RBP2.67□□□□□ -1.98
SWD3YBR175W MAL12P53341 584 aa2.67□□□□□ -1.98
SWD3YBR175W RRN9P53437 365 aa2.67□□□□□ -1.98
SWD3YBR175W YNL234WP53857 426 aa2.67□□□□□ -1.98
SWD3YBR175W SNZ1Q03148 297 aa2.67□□□□□ -1.98
SWD3YBR175W HER2Q03557 464 aa2.67□□□□□ -1.98
SWD3YBR175W ENT5Q03769 411 aaKnown RBP2.67□□□□□ -1.98
SWD3YBR175W BNA7Q04066 261 aa2.67□□□□□ -1.98
SWD3YBR175W YLR283WQ05867 314 aa2.67□□□□□ -1.98
SWD3YBR175W BNA5Q05979 453 aa2.67□□□□□ -1.98
SWD3YBR175W BER1Q06688 274 aaKnown RBP2.67□□□□□ -1.98
SWD3YBR175W PAM18Q07914 168 aa2.67□□□□□ -1.98
SWD3YBR175W THI20Q08224 551 aa2.67□□□□□ -1.98
SWD3YBR175W YPQ1Q12010 308 aa2.67□□□□□ -1.98
SWD3YBR175W ICT1Q12385 394 aa2.67□□□□□ -1.98
SWD3YBR175W YOP1Q12402 180 aa2.67□□□□□ -1.98
SWD3YBR175W ARP6Q12509 438 aa2.67□□□□□ -1.98
SWD3YBR175W YPR117WQ06116 2489 aa2.66□□□□□ -1.98
SWD3YBR175W PGK1P00560 416 aaKnown RBP2.66□□□□□ -1.98
SWD3YBR175W AMD1P15274 810 aaKnown RBP2.66□□□□□ -1.98
SWD3YBR175W MET16P18408 261 aaPredicted RBP2.66□□□□□ -1.98
SWD3YBR175W EXO70P19658 623 aa2.66□□□□□ -1.98
SWD3YBR175W YCR100CP25606 316 aa2.66□□□□□ -1.98
SWD3YBR175W ZIP1P31111 875 aa2.66□□□□□ -1.98
SWD3YBR175W ECM15P35195 104 aa2.66□□□□□ -1.98
SWD3YBR175W YNK1P36010 153 aaKnown RBP2.66□□□□□ -1.98
SWD3YBR175W RSM22P36056 628 aa2.66□□□□□ -1.98
SWD3YBR175W SPC34P36131 295 aa2.66□□□□□ -1.98
SWD3YBR175W AIM29P36154 155 aa2.66□□□□□ -1.98
SWD3YBR175W YPK3P38070 525 aa2.66□□□□□ -1.98
SWD3YBR175W IST2P38250 946 aa2.66□□□□□ -1.98
SWD3YBR175W SLX1P38324 304 aa2.66□□□□□ -1.98
SWD3YBR175W BIG1P38813 335 aa2.66□□□□□ -1.98
SWD3YBR175W YHR182WP38870 785 aa2.66□□□□□ -1.98
SWD3YBR175W FHL1P39521 936 aa2.66□□□□□ -1.98
SWD3YBR175W COA1P40452 197 aa2.66□□□□□ -1.98
SWD3YBR175W CSM2P40465 213 aa2.66□□□□□ -1.98
SWD3YBR175W SLM1P40485 686 aa2.66□□□□□ -1.98
SWD3YBR175W YIR014WP40570 242 aa2.66□□□□□ -1.98
SWD3YBR175W AGP3P43548 558 aa2.66□□□□□ -1.98
SWD3YBR175W GAT1P43574 510 aa2.66□□□□□ -1.98
SWD3YBR175W VPS25P47142 202 aa2.66□□□□□ -1.98
SWD3YBR175W AZR1P50080 613 aa2.66□□□□□ -1.98
SWD3YBR175W SEH1P53011 349 aaKnown RBP2.66□□□□□ -1.98
SWD3YBR175W LST7P53237 242 aa2.66□□□□□ -1.98
SWD3YBR175W OKP1P53298 406 aa2.66□□□□□ -1.98
SWD3YBR175W YNR048WP53740 393 aa2.66□□□□□ -1.98
SWD3YBR175W NOP13P53883 403 aaKnown RBP RIP-Chip data2.66□□□□□ -1.98not detected
SWD3YBR175W SAM50P53969 484 aa2.66□□□□□ -1.98
SWD3YBR175W BET4Q00618 327 aa2.66□□□□□ -1.98
SWD3YBR175W SLT2Q00772 484 aa2.66□□□□□ -1.98
SWD3YBR175W SPR6Q01684 191 aa2.66□□□□□ -1.98
SWD3YBR175W RLI1Q03195 608 aaKnown RBP2.66□□□□□ -1.98
SWD3YBR175W YMR209CQ03648 457 aa2.66□□□□□ -1.98
SWD3YBR175W RIM13Q03792 727 aa2.66□□□□□ -1.98
SWD3YBR175W PBP4Q07362 185 aaKnown RBP2.66□□□□□ -1.98
SWD3YBR175W SMC5Q08204 1093 aa2.66□□□□□ -1.98
SWD3YBR175W YLR112WQ12130 139 aa2.66□□□□□ -1.98
SWD3YBR175W NCA2Q12374 616 aa2.66□□□□□ -1.98
SWD3YBR175W SET6Q12529 373 aa2.66□□□□□ -1.98
SWD3YBR175W VPS15P22219 1454 aa2.65□□□□□ -1.98
SWD3YBR175W TEF1P02994 458 aaKnown RBP2.65□□□□□ -1.99
SWD3YBR175W KSS1P14681 368 aa2.65□□□□□ -1.99
SWD3YBR175W COQ1P18900 473 aa2.65□□□□□ -1.99
SWD3YBR175W YPK2P18961 677 aa2.65□□□□□ -1.99
SWD3YBR175W VPS1P21576 704 aaKnown RBP2.65□□□□□ -1.99
SWD3YBR175W PUT3P25502 979 aaPredicted RBP2.65□□□□□ -1.99
SWD3YBR175W RPS5P26783 225 aaKnown RBP2.65□□□□□ -1.99
SWD3YBR175W TIP1P27654 210 aaPredicted RBP2.65□□□□□ -1.99
SWD3YBR175W PPA2P28239 310 aa2.65□□□□□ -1.99
SWD3YBR175W ACB1P31787 87 aa2.65□□□□□ -1.99
SWD3YBR175W PDR3P33200 976 aa2.65□□□□□ -1.99
SWD3YBR175W LOS1P33418 1100 aaPredicted RBP2.65□□□□□ -1.99
SWD3YBR175W HOT13P36078 116 aa2.65□□□□□ -1.99
SWD3YBR175W SWD2P36104 329 aaPredicted RBP2.65□□□□□ -1.99
SWD3YBR175W ECM4P36156 370 aa2.65□□□□□ -1.99
SWD3YBR175W PRS4P38063 326 aaPredicted RBP2.65□□□□□ -1.99
SWD3YBR175W DTR1P38125 572 aa2.65□□□□□ -1.99
SWD3YBR175W LDB7P38210 180 aa2.65□□□□□ -1.99
SWD3YBR175W DHH1P39517 506 aaKnown RBP2.65□□□□□ -1.99
SWD3YBR175W VPS52P39904 641 aa2.65□□□□□ -1.99
SWD3YBR175W RTS2P40962 232 aa2.65□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms