RNA–Protein interactions for RNA: YBR055C

PRP6, Transcript of Splicing factor, yeastyeast

Gene PRP6, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP6YBR055C RCY1P39531 840 aa2.15□□□□□ -2.07
PRP6YBR055C MST28P39552 234 aa2.15□□□□□ -2.07
PRP6YBR055C RRT5P43607 289 aa2.15□□□□□ -2.07
PRP6YBR055C SFH5P47008 294 aa2.15□□□□□ -2.07
PRP6YBR055C DIG1Q03063 452 aaKnown RBP2.15□□□□□ -2.07
PRP6YBR055C TRM732Q03496 1420 aa2.15□□□□□ -2.07
PRP6YBR055C RIM13Q03792 727 aa2.15□□□□□ -2.07
PRP6YBR055C RUD3Q12234 484 aaKnown RBP2.15□□□□□ -2.07
PRP6YBR055C TPT1Q12272 230 aaKnown RBP2.15□□□□□ -2.07
PRP6YBR055C AHC1Q12433 566 aa2.15□□□□□ -2.07
PRP6YBR055C SNT2P53127 1403 aa2.14□□□□□ -2.07
PRP6YBR055C MSS116P15424 664 aaKnown RBP2.14□□□□□ -2.07
PRP6YBR055C UTR1P21373 530 aa2.14□□□□□ -2.07
PRP6YBR055C YEF1P32622 495 aa2.14□□□□□ -2.07
PRP6YBR055C VAM7P32912 316 aa2.14□□□□□ -2.07
PRP6YBR055C YKL162CP36052 402 aa2.14□□□□□ -2.07
PRP6YBR055C CHK1P38147 527 aa2.14□□□□□ -2.07
PRP6YBR055C CTM1P38818 585 aa2.14□□□□□ -2.07
PRP6YBR055C ALG8P40351 577 aa2.14□□□□□ -2.07
PRP6YBR055C CDC40P40968 455 aaPredicted RBP2.14□□□□□ -2.07
PRP6YBR055C NAS6P50086 228 aa2.14□□□□□ -2.07
PRP6YBR055C HER2Q03557 464 aa2.14□□□□□ -2.07
PRP6YBR055C SEG1Q04279 960 aa2.14□□□□□ -2.07
PRP6YBR055C AFT2Q08957 416 aa2.14□□□□□ -2.07
PRP6YBR055C SAM4Q08985 325 aaKnown RBP2.14□□□□□ -2.07
PRP6YBR055C BUD3P25558 1636 aa2.14□□□□□ -2.07
PRP6YBR055C YCP4P25349 247 aaKnown RBP2.14□□□□□ -2.07
PRP6YBR055C NDC1P32500 655 aa2.14□□□□□ -2.07
PRP6YBR055C MCR1P36060 302 aaKnown RBP2.14□□□□□ -2.07
PRP6YBR055C RIB5P38145 238 aa2.14□□□□□ -2.07
PRP6YBR055C IML3P38265 245 aa2.14□□□□□ -2.07
PRP6YBR055C CCT4P39078 528 aaKnown RBP2.14□□□□□ -2.07
PRP6YBR055C ABM1P47146 123 aa2.14□□□□□ -2.07
PRP6YBR055C YNL134CP53912 376 aaKnown RBP2.14□□□□□ -2.07
PRP6YBR055C RVB1Q03940 463 aaKnown RBP2.14□□□□□ -2.07
PRP6YBR055C THI7Q05998 598 aa2.14□□□□□ -2.07
PRP6YBR055C YLR173WQ06247 608 aa2.14□□□□□ -2.07
PRP6YBR055C GAT3Q07928 141 aa2.14□□□□□ -2.07
PRP6YBR055C DSE3Q08729 430 aa2.14□□□□□ -2.07
PRP6YBR055C SNX3Q08826 162 aaKnown RBP2.14□□□□□ -2.07
PRP6YBR055C YPQ1Q12010 308 aa2.14□□□□□ -2.07
PRP6YBR055C ULS1Q08562 1619 aa2.14□□□□□ -2.07
PRP6YBR055C HAP1P0CE41 1502 aa2.14□□□□□ -2.07
PRP6YBR055C PAB1P04147 577 aaKnown RBP RIP-Chip data2.13□□□□□ -2.07 RIP-Chip
PRP6YBR055C RPL24AP04449 155 aaKnown RBP2.13□□□□□ -2.07
PRP6YBR055C RAD1P06777 1100 aa2.13□□□□□ -2.07
PRP6YBR055C RPL5P26321 297 aaKnown RBP2.13□□□□□ -2.07
PRP6YBR055C VMA5P31412 392 aaKnown RBP2.13□□□□□ -2.07
PRP6YBR055C GPX2P38143 162 aa2.13□□□□□ -2.07
PRP6YBR055C PEX32P38292 413 aa2.13□□□□□ -2.07
PRP6YBR055C YHK8P38776 514 aa2.13□□□□□ -2.07
PRP6YBR055C YHR182WP38870 785 aa2.13□□□□□ -2.07
PRP6YBR055C OST1P41543 476 aaKnown RBP2.13□□□□□ -2.07
PRP6YBR055C TRM112P53738 135 aaPredicted RBP2.13□□□□□ -2.07
PRP6YBR055C BCH1Q05029 724 aa2.13□□□□□ -2.07
PRP6YBR055C RBD2Q12270 262 aa2.13□□□□□ -2.07
PRP6YBR055C SET6Q12529 373 aa2.13□□□□□ -2.07
PRP6YBR055C PDR12Q02785 1511 aa2.13□□□□□ -2.07
PRP6YBR055C MTF1P14908 341 aaKnown RBP2.13□□□□□ -2.07
PRP6YBR055C ARF2P19146 181 aaKnown RBP2.13□□□□□ -2.07
PRP6YBR055C FAR1P21268 830 aa2.13□□□□□ -2.07
PRP6YBR055C POP5P28005 173 aa2.13□□□□□ -2.07
PRP6YBR055C NTG1P31378 399 aa2.13□□□□□ -2.07
PRP6YBR055C TIR2P33890 251 aa2.13□□□□□ -2.07
PRP6YBR055C LST7P53237 242 aa2.13□□□□□ -2.07
PRP6YBR055C PXR1P53335 271 aaPredicted RBP2.13□□□□□ -2.07
PRP6YBR055C YMR102CQ03177 834 aa2.13□□□□□ -2.07
PRP6YBR055C BCP1Q06338 283 aa2.13□□□□□ -2.07
PRP6YBR055C PRP46Q12417 451 aaPredicted RBP2.13□□□□□ -2.07
PRP6YBR055C DET1Q99288 334 aaKnown RBP2.13□□□□□ -2.07
PRP6YBR055C SMC4Q12267 1418 aa2.13□□□□□ -2.07
PRP6YBR055C MLP2P40457 1679 aa2.13□□□□□ -2.07
PRP6YBR055C TMT1P32643 299 aa2.12□□□□□ -2.07
PRP6YBR055C IST2P38250 946 aa2.12□□□□□ -2.07
PRP6YBR055C MTC4P38335 694 aaKnown RBP2.12□□□□□ -2.07
PRP6YBR055C YHR045WP38775 560 aa2.12□□□□□ -2.07
PRP6YBR055C FHL1P39521 936 aa2.12□□□□□ -2.07
PRP6YBR055C RBG1P39729 369 aa2.12□□□□□ -2.07
PRP6YBR055C DIM1P41819 318 aaKnown RBP2.12□□□□□ -2.07
PRP6YBR055C YJL118WP47022 219 aa2.12□□□□□ -2.07
PRP6YBR055C AIM24P47127 394 aa2.12□□□□□ -2.07
PRP6YBR055C TAF6P53040 516 aa2.12□□□□□ -2.07
PRP6YBR055C RAX1Q08760 435 aa2.12□□□□□ -2.07
PRP6YBR055C SLF1Q12034 447 aaKnown RBP2.12□□□□□ -2.07
PRP6YBR055C BTS1Q12051 335 aa2.12□□□□□ -2.07
PRP6YBR055C MED4Q12343 284 aa2.12□□□□□ -2.07
PRP6YBR055C RRP12Q12754 1228 aaKnown RBP2.12□□□□□ -2.07
PRP6YBR055C CFT1Q06632 1357 aaKnown RBP2.12□□□□□ -2.07
PRP6YBR055C SSK22P25390 1331 aaPredicted RBP2.12□□□□□ -2.07
PRP6YBR055C GDB1Q06625 1536 aa2.12□□□□□ -2.07
PRP6YBR055C YFL068WP0CX99 160 aa2.12□□□□□ -2.07
PRP6YBR055C YLL066W-AP0CY00 160 aa2.12□□□□□ -2.07
PRP6YBR055C YLL067W-AP0CY01 160 aa2.12□□□□□ -2.07
PRP6YBR055C IMP3P32899 183 aaPredicted RBP2.12□□□□□ -2.07
PRP6YBR055C PMU1P36069 295 aa2.12□□□□□ -2.07
PRP6YBR055C YBR137WP38276 179 aa2.12□□□□□ -2.07
PRP6YBR055C MMS21P38632 267 aa2.12□□□□□ -2.07
PRP6YBR055C MTC6P38849 526 aa2.12□□□□□ -2.07
PRP6YBR055C INA22P40576 216 aa2.12□□□□□ -2.07
PRP6YBR055C KEG1P43614 200 aa2.12□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms