RNA–Protein interactions for RNA: ENST00000640545.1

GFAP-236, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-236ENST00000640545 TMX1Q9H3N1 280 aa16.56■□□□□ 0.24
GFAP-236ENST00000640545 UNC45AQ9H3U1 944 aa16.56■□□□□ 0.24
GFAP-236ENST00000640545 CDHR5Q9HBB8 845 aa16.56■□□□□ 0.24
GFAP-236ENST00000640545 ERVK-5Q9HDB9 667 aa16.56■□□□□ 0.24
GFAP-236ENST00000640545 RGS18Q9NS28 235 aa16.56■□□□□ 0.24
GFAP-236ENST00000640545 DDX25Q9UHL0 483 aaKnown RBP16.56■□□□□ 0.24
GFAP-236ENST00000640545 REV3LO60673 3130 aa16.55■□□□□ 0.24
GFAP-236ENST00000640545 PFKFB2O60825 505 aa16.55■□□□□ 0.24
GFAP-236ENST00000640545 DKC1O60832 514 aaKnown RBP eCLIP16.55■□□□□ 0.24
GFAP-236ENST00000640545 PSMD10O75832 226 aa16.55■□□□□ 0.24
GFAP-236ENST00000640545 CLCN3P51790 818 aa16.55■□□□□ 0.24
GFAP-236ENST00000640545 NLRP11P59045 1033 aaKnown RBP16.55■□□□□ 0.24
GFAP-236ENST00000640545 SCRN1Q12765 414 aa16.55■□□□□ 0.24
GFAP-236ENST00000640545 LETM2Q2VYF4 491 aa16.55■□□□□ 0.24
GFAP-236ENST00000640545 PABPC5Q96DU9 382 aaKnown RBP16.55■□□□□ 0.24
GFAP-236ENST00000640545 C1QTNF1Q9BXJ1 281 aa16.55■□□□□ 0.24
GFAP-236ENST00000640545 ATP6V0A4Q9HBG4 840 aa16.55■□□□□ 0.24
GFAP-236ENST00000640545 BRMS1Q9HCU9 246 aa16.55■□□□□ 0.24
GFAP-236ENST00000640545 KCNJ14Q9UNX9 436 aa16.55■□□□□ 0.24
GFAP-236ENST00000640545 PCDHB12Q9Y5F1 795 aa16.55■□□□□ 0.24
GFAP-236ENST00000640545 COL4A4P53420 1690 aaPredicted RBP16.55■□□□□ 0.24
GFAP-236ENST00000640545 STK36Q9NRP7 1315 aa16.54■□□□□ 0.24
GFAP-236ENST00000640545 TTC3P53804 2025 aa16.54■□□□□ 0.24
GFAP-236ENST00000640545 M0R2N6 131 aa16.54■□□□□ 0.24
GFAP-236ENST00000640545 GPR32O75388 356 aa16.54■□□□□ 0.24
GFAP-236ENST00000640545 TDP2O95551 362 aa16.54■□□□□ 0.24
GFAP-236ENST00000640545 GCFC2P16383 781 aaKnown RBP16.54■□□□□ 0.24
GFAP-236ENST00000640545 EIF4BP23588 611 aaKnown RBP16.54■□□□□ 0.24
GFAP-236ENST00000640545 INF2Q27J81 1249 aa16.54■□□□□ 0.24
GFAP-236ENST00000640545 XKR3Q5GH77 459 aa16.54■□□□□ 0.24
GFAP-236ENST00000640545 CRIPAKQ8N1N5 446 aa16.54■□□□□ 0.24
GFAP-236ENST00000640545 TMEM40Q8WWA1 233 aa16.54■□□□□ 0.24
GFAP-236ENST00000640545 FAM20AQ96MK3 541 aa16.54■□□□□ 0.24
GFAP-236ENST00000640545 AIFM3Q96NN9 605 aa16.54■□□□□ 0.24
GFAP-236ENST00000640545 JPH2Q9BR39 696 aaPredicted RBP16.54■□□□□ 0.24
GFAP-236ENST00000640545 PHF20Q9BVI0 1012 aa16.54■□□□□ 0.24
GFAP-236ENST00000640545 SEPT9Q9UHD8 586 aaPredicted RBP16.54■□□□□ 0.24
GFAP-236ENST00000640545 TPCN1Q9ULQ1 816 aa16.54■□□□□ 0.24
GFAP-236ENST00000640545 PLAGL2Q9UPG8 496 aa16.54■□□□□ 0.24
GFAP-236ENST00000640545 MRPL42Q9Y6G3 142 aaKnown RBP16.54■□□□□ 0.24
GFAP-236ENST00000640545 GRM6O15303 877 aa16.53■□□□□ 0.24
GFAP-236ENST00000640545 HOXA2O43364 376 aa16.53■□□□□ 0.24
GFAP-236ENST00000640545 EDIL3O43854 480 aa16.53■□□□□ 0.24
GFAP-236ENST00000640545 ZNF862O60290 1169 aa16.53■□□□□ 0.24
GFAP-236ENST00000640545 MMP1P03956 469 aa16.53■□□□□ 0.24
GFAP-236ENST00000640545 CSPP1Q1MSJ5 1256 aa16.53■□□□□ 0.24
GFAP-236ENST00000640545 PTCRAQ6ISU1 281 aaPredicted RBP16.53■□□□□ 0.24
GFAP-236ENST00000640545 NEK8Q86SG6 692 aa16.53■□□□□ 0.24
GFAP-236ENST00000640545 LRRC71Q8N4P6 559 aa16.53■□□□□ 0.24
GFAP-236ENST00000640545 NLRP7Q8WX94 980 aa16.53■□□□□ 0.24
GFAP-236ENST00000640545 NIFKQ9BYG3 293 aaKnown RBP16.53■□□□□ 0.24
GFAP-236ENST00000640545 ELAC1Q9H777 363 aaKnown RBP16.53■□□□□ 0.24
GFAP-236ENST00000640545 ALG13Q9NP73 1137 aaKnown RBP16.53■□□□□ 0.24
GFAP-236ENST00000640545 TMEM161AQ9NX61 479 aa16.53■□□□□ 0.24
GFAP-236ENST00000640545 CLDND1Q9NY35 253 aa16.53■□□□□ 0.24
GFAP-236ENST00000640545 ORC3Q9UBD5 711 aaPredicted RBP16.53■□□□□ 0.24
GFAP-236ENST00000640545 TBKBP1A7MCY6 615 aa16.52■□□□□ 0.24
GFAP-236ENST00000640545 DDX11L8A8MPP1 907 aa16.52■□□□□ 0.24
GFAP-236ENST00000640545 C9IYK1 514 aa16.52■□□□□ 0.24
GFAP-236ENST00000640545 BAG4O95429 457 aaKnown RBP16.52■□□□□ 0.24
GFAP-236ENST00000640545 LINC00271P0C7V0 271 aa16.52■□□□□ 0.24
GFAP-236ENST00000640545 PSMC5P62195 406 aa16.52■□□□□ 0.24
GFAP-236ENST00000640545 MTERF2Q49AM1 385 aa16.52■□□□□ 0.24
GFAP-236ENST00000640545 PPP4R3AQ6IN85 833 aa16.52■□□□□ 0.24
GFAP-236ENST00000640545 FAM228AQ86W67 206 aa16.52■□□□□ 0.24
GFAP-236ENST00000640545 EXOC8Q8IYI6 725 aa16.52■□□□□ 0.24
GFAP-236ENST00000640545 ABI1Q8IZP0 508 aa16.52■□□□□ 0.24
GFAP-236ENST00000640545 ETNPPLQ8TBG4 499 aa16.52■□□□□ 0.24
GFAP-236ENST00000640545 GJA10Q969M2 543 aa16.52■□□□□ 0.24
GFAP-236ENST00000640545 MBOAT7Q96N66 472 aa16.52■□□□□ 0.24
GFAP-236ENST00000640545 INO80BQ9C086 356 aaPredicted RBP16.52■□□□□ 0.24
GFAP-236ENST00000640545 NCOR1O75376 2440 aa16.51■□□□□ 0.23
GFAP-236ENST00000640545 MYH9P35579 1960 aaKnown RBP16.51■□□□□ 0.23
GFAP-236ENST00000640545 TCF20Q9UGU0 1960 aaKnown RBP16.51■□□□□ 0.23
GFAP-236ENST00000640545 MUC3AQ02505 3323 aa16.51■□□□□ 0.23
GFAP-236ENST00000640545 H3BQ06 376 aaPredicted RBP16.51■□□□□ 0.23
GFAP-236ENST00000640545 MGEA5O60502 916 aa16.51■□□□□ 0.23
GFAP-236ENST00000640545 CCNT1O60563 726 aaKnown RBP16.51■□□□□ 0.23
GFAP-236ENST00000640545 AK2P54819 239 aa16.51■□□□□ 0.23
GFAP-236ENST00000640545 FAM189BP81408 668 aa16.51■□□□□ 0.23
GFAP-236ENST00000640545 NPY5RQ15761 445 aa16.51■□□□□ 0.23
GFAP-236ENST00000640545 UGCGQ16739 394 aa16.51■□□□□ 0.23
GFAP-236ENST00000640545 PIK3AP1Q6ZUJ8 805 aa16.51■□□□□ 0.23
GFAP-236ENST00000640545 KLHL23Q8NBE8 558 aa16.51■□□□□ 0.23
GFAP-236ENST00000640545 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.51■□□□□ 0.23
GFAP-236ENST00000640545 NEK9Q8TD19 979 aa16.51■□□□□ 0.23
GFAP-236ENST00000640545 MICAL1Q8TDZ2 1067 aa16.51■□□□□ 0.23
GFAP-236ENST00000640545 GCOM2Q9BZD3 368 aaPredicted RBP16.51■□□□□ 0.23
GFAP-236ENST00000640545 ADAMTS10Q9H324 1103 aa16.51■□□□□ 0.23
GFAP-236ENST00000640545 DACT1Q9NYF0 836 aa16.51■□□□□ 0.23
GFAP-236ENST00000640545 GRXCR2A6NFK2 248 aa16.5■□□□□ 0.23
GFAP-236ENST00000640545 TBX3O15119 743 aa16.5■□□□□ 0.23
GFAP-236ENST00000640545 CSPG5O95196 566 aa16.5■□□□□ 0.23
GFAP-236ENST00000640545 ITGB1P05556 798 aa16.5■□□□□ 0.23
GFAP-236ENST00000640545 CENPBP07199 599 aaPredicted RBP16.5■□□□□ 0.23
GFAP-236ENST00000640545 SSTR3P32745 418 aaPredicted RBP16.5■□□□□ 0.23
GFAP-236ENST00000640545 KRT2P35908 639 aa16.5■□□□□ 0.23
GFAP-236ENST00000640545 QARSP47897 775 aaKnown RBP16.5■□□□□ 0.23
GFAP-236ENST00000640545 GPC3P51654 580 aa16.5■□□□□ 0.23
GFAP-236ENST00000640545 UBE3AQ05086 875 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms