RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 EIF2AK2P19525 551 aaKnown RBP5.54□□□□□ -1.52
LINC00550-201ENST00000629293 MCTP1Q6DN14 999 aa5.54□□□□□ -1.52
LINC00550-201ENST00000629293 GPR152Q8TDT2 470 aa5.54□□□□□ -1.52
LINC00550-201ENST00000629293 PIBF1Q8WXW3 757 aa5.54□□□□□ -1.52
LINC00550-201ENST00000629293 KCNB2Q92953 911 aa5.54□□□□□ -1.52
LINC00550-201ENST00000629293 CCDC74AQ96AQ1 378 aa5.54□□□□□ -1.52
LINC00550-201ENST00000629293 TTC14Q96N46 770 aa5.54□□□□□ -1.52
LINC00550-201ENST00000629293 C1QTNF1Q9BXJ1 281 aa5.54□□□□□ -1.52
LINC00550-201ENST00000629293 MYH4Q9Y623 1939 aa5.54□□□□□ -1.52
LINC00550-201ENST00000629293 ARIH2O95376 493 aa5.54□□□□□ -1.52
LINC00550-201ENST00000629293 CFBP00751 764 aa5.54□□□□□ -1.52
LINC00550-201ENST00000629293 FGAP02671 866 aa5.54□□□□□ -1.52
LINC00550-201ENST00000629293 ZNF286BP0CG31 522 aa5.54□□□□□ -1.52
LINC00550-201ENST00000629293 MYCLP12524 364 aaPredicted RBP5.54□□□□□ -1.52
LINC00550-201ENST00000629293 DEFB103AP81534 67 aa5.54□□□□□ -1.52
LINC00550-201ENST00000629293 SP4Q02446 784 aa5.54□□□□□ -1.52
LINC00550-201ENST00000629293 TAP1Q03518 808 aa5.54□□□□□ -1.52
LINC00550-201ENST00000629293 PAK2Q13177 524 aa5.54□□□□□ -1.52
LINC00550-201ENST00000629293 GRB10Q13322 594 aa5.54□□□□□ -1.52
LINC00550-201ENST00000629293 BFSP2Q13515 415 aa5.54□□□□□ -1.52
LINC00550-201ENST00000629293 ARID5BQ14865 1188 aa5.54□□□□□ -1.52
LINC00550-201ENST00000629293 C7orf31Q8N865 590 aa5.54□□□□□ -1.52
LINC00550-201ENST00000629293 C3orf58Q8NDZ4 430 aa5.54□□□□□ -1.52
LINC00550-201ENST00000629293 H3BQ06 376 aaPredicted RBP5.54□□□□□ -1.52
LINC00550-201ENST00000629293 EIF4BP23588 611 aaKnown RBP5.54□□□□□ -1.52
LINC00550-201ENST00000629293 CBLBQ13191 982 aa5.54□□□□□ -1.52
LINC00550-201ENST00000629293 MFSD6Q6ZSS7 791 aa5.54□□□□□ -1.52
LINC00550-201ENST00000629293 EHBP1Q8NDI1 1231 aa5.54□□□□□ -1.52
LINC00550-201ENST00000629293 GPT2Q8TD30 523 aa5.54□□□□□ -1.52
LINC00550-201ENST00000629293 DCAF4Q8WV16 495 aa5.54□□□□□ -1.52
LINC00550-201ENST00000629293 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.54□□□□□ -1.52
LINC00550-201ENST00000629293 SNX14Q9Y5W7 946 aa5.54□□□□□ -1.52
LINC00550-201ENST00000629293 MRVI1Q9Y6F6 885 aa5.54□□□□□ -1.52
LINC00550-201ENST00000629293 A0A0D9SFI3 127 aa5.53□□□□□ -1.52
LINC00550-201ENST00000629293 CPNE3O75131 537 aaKnown RBP5.53□□□□□ -1.52
LINC00550-201ENST00000629293 PDHBP11177 359 aa5.53□□□□□ -1.52
LINC00550-201ENST00000629293 ZNF200P98182 395 aaPredicted RBP5.53□□□□□ -1.52
LINC00550-201ENST00000629293 CTC1Q2NKJ3 1217 aa5.53□□□□□ -1.52
LINC00550-201ENST00000629293 TMEM31Q5JXX7 168 aa5.53□□□□□ -1.52
LINC00550-201ENST00000629293 GDF6Q6KF10 455 aaPredicted RBP5.53□□□□□ -1.52
LINC00550-201ENST00000629293 HS2ST1Q7LGA3 356 aa5.53□□□□□ -1.52
LINC00550-201ENST00000629293 ZNF589Q86UQ0 364 aaPredicted RBP5.53□□□□□ -1.52
LINC00550-201ENST00000629293 HOMER1Q86YM7 354 aa5.53□□□□□ -1.52
LINC00550-201ENST00000629293 VWCEQ96DN2 955 aa5.53□□□□□ -1.52
LINC00550-201ENST00000629293 SLC9A7Q96T83 725 aa5.53□□□□□ -1.52
LINC00550-201ENST00000629293 RMDN3Q96TC7 470 aa5.53□□□□□ -1.52
LINC00550-201ENST00000629293 LRFN3Q9BTN0 628 aa5.53□□□□□ -1.52
LINC00550-201ENST00000629293 TMEM63CQ9P1W3 806 aa5.53□□□□□ -1.52
LINC00550-201ENST00000629293 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.53□□□□□ -1.52
LINC00550-201ENST00000629293 SCN5AQ14524 2016 aa5.53□□□□□ -1.52
LINC00550-201ENST00000629293 B4DLN1 442 aa5.53□□□□□ -1.52
LINC00550-201ENST00000629293 FOXP2O15409 715 aa5.53□□□□□ -1.52
LINC00550-201ENST00000629293 MICAL2O94851 1124 aa5.53□□□□□ -1.52
LINC00550-201ENST00000629293 CASTP20810 708 aaKnown RBP5.53□□□□□ -1.52
LINC00550-201ENST00000629293 MRPL12P52815 198 aaKnown RBP5.53□□□□□ -1.52
LINC00550-201ENST00000629293 ZSCAN23Q3MJ62 389 aa5.53□□□□□ -1.52
LINC00550-201ENST00000629293 ARHGEF16Q5VV41 709 aa5.53□□□□□ -1.52
LINC00550-201ENST00000629293 TAAR1Q96RJ0 339 aa5.53□□□□□ -1.52
LINC00550-201ENST00000629293 PPP1R9BQ96SB3 815 aa5.53□□□□□ -1.52
LINC00550-201ENST00000629293 RANBP17Q9H2T7 1088 aaKnown RBP5.53□□□□□ -1.52
LINC00550-201ENST00000629293 HDAC6Q9UBN7 1215 aa5.53□□□□□ -1.52
LINC00550-201ENST00000629293 PARP14Q460N5 1801 aa5.53□□□□□ -1.52
LINC00550-201ENST00000629293 PFKMP08237 780 aa5.52□□□□□ -1.53
LINC00550-201ENST00000629293 PLA2G5P39877 138 aa5.52□□□□□ -1.53
LINC00550-201ENST00000629293 ZNF543Q08ER8 600 aa5.52□□□□□ -1.53
LINC00550-201ENST00000629293 NMIQ13287 307 aaPredicted RBP5.52□□□□□ -1.53
LINC00550-201ENST00000629293 CDC37Q16543 378 aaPredicted RBP5.52□□□□□ -1.53
LINC00550-201ENST00000629293 KIAA0753Q2KHM9 967 aa5.52□□□□□ -1.53
LINC00550-201ENST00000629293 LRRC8DQ7L1W4 858 aa5.52□□□□□ -1.53
LINC00550-201ENST00000629293 FCHSD1Q86WN1 690 aa5.52□□□□□ -1.53
LINC00550-201ENST00000629293 CLEC4DQ8WXI8 215 aa5.52□□□□□ -1.53
LINC00550-201ENST00000629293 UPF3BQ9BZI7 483 aaKnown RBP5.52□□□□□ -1.53
LINC00550-201ENST00000629293 GRIP2Q9C0E4 1043 aa5.52□□□□□ -1.53
LINC00550-201ENST00000629293 TMA7Q9Y2S6 64 aaKnown RBP5.52□□□□□ -1.53
LINC00550-201ENST00000629293 Q9Y3F1 56 aa5.52□□□□□ -1.53
LINC00550-201ENST00000629293 CFAP54Q96N23 3096 aa5.52□□□□□ -1.53
LINC00550-201ENST00000629293 GH1P01241 217 aa5.52□□□□□ -1.53
LINC00550-201ENST00000629293 SELPP16109 830 aa5.52□□□□□ -1.53
LINC00550-201ENST00000629293 HOXA13P31271 388 aaPredicted RBP5.52□□□□□ -1.53
LINC00550-201ENST00000629293 WDR5P61964 334 aaKnown RBP5.52□□□□□ -1.53
LINC00550-201ENST00000629293 CLUL1Q15846 466 aa5.52□□□□□ -1.53
LINC00550-201ENST00000629293 NFRKBQ6P4R8 1299 aa5.52□□□□□ -1.53
LINC00550-201ENST00000629293 KAT14Q9H8E8 782 aa5.52□□□□□ -1.53
LINC00550-201ENST00000629293 SYNPO2Q9UMS6 1093 aa5.52□□□□□ -1.53
LINC00550-201ENST00000629293 PLIN4Q96Q06 1357 aa5.52□□□□□ -1.53
LINC00550-201ENST00000629293 MYH7P12883 1935 aa5.52□□□□□ -1.53
LINC00550-201ENST00000629293 B4E1Z4 1266 aa5.52□□□□□ -1.53
LINC00550-201ENST00000629293 HSPD1P10809 573 aaKnown RBP5.52□□□□□ -1.53
LINC00550-201ENST00000629293 THPOP40225 353 aa5.52□□□□□ -1.53
LINC00550-201ENST00000629293 STXBP2Q15833 593 aa5.52□□□□□ -1.53
LINC00550-201ENST00000629293 MCMDC2Q4G0Z9 681 aa5.52□□□□□ -1.53
LINC00550-201ENST00000629293 CAVIN1Q6NZI2 390 aaKnown RBP5.52□□□□□ -1.53
LINC00550-201ENST00000629293 CWC27Q6UX04 472 aaKnown RBP5.52□□□□□ -1.53
LINC00550-201ENST00000629293 IQCA1Q86XH1 822 aa5.52□□□□□ -1.53
LINC00550-201ENST00000629293 TBC1D10CQ8IV04 446 aa5.52□□□□□ -1.53
LINC00550-201ENST00000629293 CCDC155Q8N6L0 562 aa5.52□□□□□ -1.53
LINC00550-201ENST00000629293 NSUN6Q8TEA1 469 aaKnown RBP5.52□□□□□ -1.53
LINC00550-201ENST00000629293 ESR2Q92731 530 aa5.52□□□□□ -1.53
LINC00550-201ENST00000629293 EVI5LQ96CN4 794 aa5.52□□□□□ -1.53
LINC00550-201ENST00000629293 CHAMP1Q96JM3 812 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms